Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 1.6e-130 469.5 252 100.0
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 1.2e-82 310.5 255 72.5
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 2.5e-80 302.8 255 71.4
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 4.6e-74 282.0 255 68.6
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 8.8e-73 277.7 276 62.7
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 1.1e-70 270.8 254 65.7
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 1.8e-65 253.4 258 58.5
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 2.3e-65 253.1 259 59.5
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 1.4e-62 243.8 259 59.1
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 2.6e-61 239.6 260 58.5
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 7.7e-61 238.0 260 57.3
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.0e-60 237.7 260 56.5
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 3.8e-60 235.7 258 57.4
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 2.5e-59 233.0 258 58.1
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 6.1e-58 228.4 259 57.1
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 1.0e-57 227.6 260 56.2
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.8e-57 226.9 257 57.2
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 2.3e-57 226.5 255 56.9
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 9.7e-56 221.1 259 54.1
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 2.6e-53 213.0 243 56.4
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 3.5e-53 212.6 249 56.2
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 4.5e-53 212.2 201 63.7
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 4.5e-53 212.2 258 52.7
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 5.9e-53 211.8 258 55.4
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 5.9e-53 211.8 244 53.7
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 5.9e-53 211.8 244 54.1
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.3e-52 210.7 254 54.3
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 1.7e-52 210.3 246 53.7
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 8.5e-52 208.0 199 62.3
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 1.9e-51 206.8 260 51.9
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 4.2e-51 205.7 254 52.0
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.1e-50 203.4 259 53.7
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 2.7e-50 203.0 264 51.5
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 3.6e-50 202.6 259 53.3
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 4.7e-50 202.2 264 51.1
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 8.0e-50 201.4 259 52.9
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 1.0e-49 201.1 252 50.4
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 3.0e-49 199.5 251 52.6
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 6.8e-49 198.4 261 50.2
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 8.8e-49 198.0 260 53.8
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 3.4e-48 196.1 254 51.2
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 9.7e-48 194.5 260 50.4
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 9.7e-48 194.5 260 50.4
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 9.7e-48 194.5 260 50.4
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 1.3e-47 194.1 261 49.4
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 2.8e-47 193.0 262 50.4
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 1.1e-46 191.0 261 51.3
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 1.4e-46 190.7 264 50.8
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 3.1e-46 189.5 257 48.6
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 5.3e-46 188.7 244 51.2
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 5.3e-46 188.7 252 47.6
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 9.1e-46 188.0 260 48.1
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 1.6e-45 187.2 261 48.3
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 1.0e-44 184.5 255 51.0
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 1.0e-44 184.5 204 55.9
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 1.3e-44 184.1 239 51.5
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 1.3e-44 184.1 260 47.7
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 3.8e-44 182.6 240 48.8
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 8.5e-44 181.4 263 47.9
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 4.2e-43 179.1 260 49.2
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 1.4e-41 174.1 257 47.1
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 1.8e-41 173.7 219 49.8
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 1.8e-41 173.7 232 50.4
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 1.8e-41 173.7 254 50.4
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 2.6e-40 169.9 183 58.5
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 4.4e-40 169.1 256 45.7
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 9.8e-40 167.9 252 47.2
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 6.3e-39 165.2 260 46.9
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 1.1e-38 164.5 253 43.1
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 5.4e-38 162.2 108 79.6
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 5.4e-38 162.2 108 79.6
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 5.4e-38 162.2 231 45.0
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 5.4e-38 162.2 229 48.9
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 5.4e-38 162.2 181 56.9
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 7.0e-38 161.8 231 48.1
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 7.0e-38 161.8 254 46.1
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 1.6e-37 160.6 218 48.6
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 2.7e-37 159.8 115 71.3
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 1.1e-35 154.5 207 49.3
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.5e-35 154.1 173 56.1
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 2.5e-35 153.3 144 61.8
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 9.5e-35 151.4 224 48.2
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 4.7e-34 149.1 255 44.7
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 6.1e-34 148.7 172 54.7
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 8.0e-34 148.3 153 56.2
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 4.0e-33 146.0 259 42.1
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 1.5e-32 144.1 115 66.1
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 1.5e-32 144.1 115 66.1
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 1.5e-32 144.1 115 66.1
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 1.5e-32 144.1 115 66.1
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 1.5e-32 144.1 115 66.1
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 1.5e-32 144.1 115 66.1
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 1.5e-32 144.1 115 66.1
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 2.0e-32 143.7 148 57.4
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 2.0e-32 143.7 115 66.1
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 2.6e-32 143.3 164 53.0
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 2.6e-32 143.3 150 57.3
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 5.7e-32 142.1 232 43.1
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 2.2e-31 140.2 179 51.4
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 3.7e-31 139.4 196 46.4
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 7.0e-30 135.2 216 42.6
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 9.2e-30 134.8 166 53.0
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 1.2e-29 134.4 157 58.0
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 3.9e-28 129.4 135 59.3
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 6.4e-23 112.1 180 47.8
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 2.0e-21 107.1 200 41.0
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 1.3e-20 104.4 85 63.5
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 6.2e-18 95.5 166 40.4
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 3.4e-16 89.7 209 37.8
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 2.2e-07 60.5 119 37.0


User provided reference genes

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