Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.1e-244 848.6 422 100.0
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 9.1e-107 391.3 446 54.5
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 4.7e-103 379.0 428 52.8
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 3.0e-102 376.3 437 54.0
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 4.5e-98 362.5 432 51.4
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 1.3e-89 334.3 373 52.3
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 1.2e-79 301.2 422 46.7
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 2.2e-76 290.4 357 49.9
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 1.1e-72 278.1 426 43.4
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 1.0e-65 255.0 447 41.2
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.1e-64 251.5 445 39.1
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 2.8e-63 246.9 441 39.2
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 1.0e-57 228.4 440 38.4
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 2.3e-57 227.3 443 38.6
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 3.0e-57 226.9 421 38.5
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.9e-56 224.2 412 38.1
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 5.6e-56 222.6 449 38.3
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 5.6e-56 222.6 432 38.4
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 9.5e-56 221.9 287 48.1
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 6.8e-54 215.7 453 38.0
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 8.4e-52 208.8 321 41.7
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 4.2e-51 206.5 453 36.0
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 5.4e-51 206.1 298 48.3
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.3e-49 201.4 423 37.8
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 9.6e-48 195.3 408 36.5
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.6e-47 194.5 432 35.0
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 1.6e-47 194.5 413 34.1
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 2.1e-47 194.1 409 36.2
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 4.7e-47 193.0 410 35.9
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 1.4e-46 191.4 474 34.0
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 1.8e-46 191.0 454 33.5
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 4.0e-46 189.9 378 37.3
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 1.5e-45 188.0 443 36.3
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 7.6e-45 185.7 437 33.4
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 9.9e-45 185.3 491 32.8
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 9.9e-45 185.3 407 37.1
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 1.9e-43 181.0 408 36.0
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 4.2e-43 179.9 392 36.0
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 4.2e-43 179.9 396 35.6
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 5.4e-43 179.5 368 36.4
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 7.1e-43 179.1 339 37.8
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 6.0e-42 176.0 422 34.6
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 6.0e-42 176.0 466 32.8
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 1.3e-41 174.9 411 32.8
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.3e-41 174.9 484 33.5
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 2.3e-41 174.1 435 34.3
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 5.1e-41 172.9 473 31.7
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 1.9e-40 171.0 424 34.0
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 3.6e-39 166.8 450 34.0
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 3.1e-38 163.7 370 36.2
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 4.0e-38 163.3 421 32.5
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 1.7e-36 157.9 380 33.7
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 1.6e-34 151.4 383 31.6
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 1.1e-32 145.2 420 31.0
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 1.9e-32 144.4 444 34.0
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 9.6e-32 142.1 388 32.2
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 1.3e-31 141.7 425 31.1
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 1.6e-31 141.4 377 34.2
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.6e-31 141.4 389 33.2
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 6.9e-30 136.0 411 31.4
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 1.5e-29 134.8 408 33.3
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 2.0e-29 134.4 336 33.6
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 4.5e-29 133.3 421 33.3
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 6.4e-28 129.4 341 33.7
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 6.4e-28 129.4 363 32.5
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.4e-27 128.3 343 32.1
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 5.5e-27 126.3 427 29.3
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 9.3e-27 125.6 420 31.2
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 3.5e-26 123.6 399 31.6
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 6.0e-26 122.9 432 28.9
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 7.9e-26 122.5 395 29.1
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 7.9e-26 122.5 425 29.4
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.3e-25 121.7 352 32.4
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 1.1e-24 118.6 395 29.1
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 1.9e-24 117.9 403 31.8
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 1.9e-24 117.9 267 33.3
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 5.6e-24 116.3 354 30.2
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 9.6e-24 115.5 386 30.8
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 3.4e-21 107.1 307 32.2
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 5.8e-21 106.3 438 29.5
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 1.7e-20 104.8 355 30.4
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 8.4e-20 102.4 282 31.6
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 7.1e-19 99.4 308 28.6
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 2.1e-18 97.8 375 28.8
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 6.0e-18 96.3 391 30.4
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 3.0e-17 94.0 220 35.5
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 3.0e-17 94.0 307 29.3
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 5.1e-17 93.2 358 29.3
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 3.3e-16 90.5 386 27.7
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 1.3e-15 88.6 391 29.2
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 1.3e-15 88.6 392 28.8
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 2.2e-15 87.8 395 29.6
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 5.3e-14 83.2 395 27.6
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 1.5e-13 81.6 391 27.6
SGA_v2.0_scaffold11G05915 Striga asiatica HOM05D007378 ORTHO05D007577 1.5e-13 81.6 318 29.6
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 7.7e-13 79.3 387 26.9
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 2.9e-12 77.4 404 25.0
Atru.chr13.298 Acer truncatum HOM05D007378 ORTHO05D007577 5.0e-12 76.6 94 50.0
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 3.2e-11 73.9 387 26.4
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 3.6e-10 70.5 382 26.7
Atru.chr13.297 Acer truncatum HOM05D007378 ORTHO05D007577 1.1e-08 65.5 100 44.0
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 5.7e-08 63.2 298 29.9
TPR.G31883 Trifolium pratense HOM05D007378 ORTHO05D007577 2.4e-06 57.8 80 38.8


User provided reference genes

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