Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 5.8e-155 550.8 274 100.0
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.9e-105 386.3 273 76.2
CSS0021689 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 3.9e-82 308.9 264 64.8
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 5.0e-82 308.5 270 66.3
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 6.2e-32 142.1 136 57.4
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.5e-30 137.5 128 60.9
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 2.6e-30 136.7 134 58.2
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 5.8e-30 135.6 282 34.8
RcHm_v2.0_Chr4g0433611 Rosa chinensis HOM05D009091 ORTHO05D003768 1.6e-24 117.5 223 37.2
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.2e-24 117.1 210 34.3
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 1.5e-22 110.9 279 30.8
FvH4_5g37213 Fragaria vesca HOM05D008321 ORTHO05D010380 2.0e-22 110.5 185 35.1
Oeu029662.1 Olea europaea HOM05D009091 ORTHO05D003768 3.8e-21 106.3 162 41.4
FAN08G3223 Fragaria x ananassa HOM05D009091 ORTHO05D003768 1.1e-20 104.8 185 34.6
RcHm_v2.0_Chr4g0420561 Rosa chinensis HOM05D009091 ORTHO05D003768 7.2e-20 102.1 201 33.8
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 2.1e-19 100.5 232 32.3
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 2.7e-19 100.1 270 31.1
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 6.1e-19 99.0 153 37.9
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 3.9e-18 96.3 261 31.0
Oeu048290.1 Olea europaea HOM05D009091 ORTHO05D003768 8.8e-18 95.1 140 40.7
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 1.5e-17 94.4 163 33.7
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.3e-17 93.2 293 28.7
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 4.3e-17 92.8 157 35.0
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 4.3e-17 92.8 206 31.1
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 7.4e-17 92.0 282 28.0
Oeu050751.1 Olea europaea HOM05D009091 ORTHO05D003768 7.4e-17 92.0 195 34.4
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.7e-17 91.7 203 33.0
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 2.2e-16 90.5 232 30.6
FAN22G1616 Fragaria x ananassa HOM05D009091 ORTHO05D003768 2.8e-16 90.1 142 37.3
FvH4_4g10363 Fragaria vesca HOM05D008321 ORTHO05D003768 3.7e-16 89.7 189 33.9
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 3.7e-16 89.7 189 34.9
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.7e-16 89.7 209 31.6
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 3.1e-15 86.7 286 22.7
RcHm_v2.0_Chr3g0496631 Rosa chinensis HOM05D009091 ORTHO05D003768 5.3e-15 85.9 127 39.4
FvH4_4g15323 Fragaria vesca HOM05D008321 ORTHO05D010380 1.2e-14 84.7 235 28.5
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 2.0e-14 84.0 217 30.4
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 2.6e-14 83.6 291 29.9
FvH4_5g18423 Fragaria vesca HOM05D009091 ORTHO05D000062 2.2e-13 80.5 221 30.3
FAN16G3103 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.9e-13 80.1 172 33.7
RcHm_v2.0_Chr7g0231331 Rosa chinensis HOM05D009091 ORTHO05D003768 2.9e-13 80.1 147 35.4
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 6.5e-13 79.0 180 32.8
FvH4_6g20173 Fragaria vesca HOM05D008321 ORTHO05D010380 1.1e-12 78.2 135 33.3
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 1.4e-12 77.8 247 27.9
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 4.2e-12 76.3 213 29.1
Rhsim05G0198600 Rhododendron simsii HOM05D000030 ORTHO05D003768 9.4e-12 75.1 137 35.0
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.2e-11 74.7 266 27.8
Oeu016711.1 Olea europaea HOM05D023826 ORTHO05D003768 1.6e-11 74.3 160 32.5
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 1.6e-11 74.3 187 29.9
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 2.1e-11 73.9 123 41.5
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.1e-11 73.9 183 27.9
MBI13_g31587_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 2.7e-11 73.6 157 29.9
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 3.6e-11 73.2 204 27.9
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 6.1e-11 72.4 181 30.9
FAN08G2819 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.0e-10 71.6 138 33.3
FAN18G1459 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.0e-10 71.6 193 26.4
FAN23G0987 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.0e-10 71.6 129 37.2
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 1.4e-10 71.2 108 40.7
MBI05_g09172_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.4e-10 71.2 137 32.8
Rhsim02G0039900 Rhododendron simsii HOM05D007314 ORTHO05D003768 1.4e-10 71.2 110 41.8
Aqoxy1G02807 Aquilegia oxysepala HOM05D008321 ORTHO05D003768 1.8e-10 70.9 180 28.3
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.8e-10 70.9 232 26.3
RcHm_v2.0_Chr1g0357501 Rosa chinensis HOM05D009091 ORTHO05D003768 1.8e-10 70.9 124 33.9
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 2.3e-10 70.5 161 33.5
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 3.0e-10 70.1 300 25.7
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.9e-10 69.7 199 27.1
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 6.7e-10 68.9 288 24.3
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 1.5e-09 67.8 216 28.2
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 2.0e-09 67.4 36 86.1
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.6e-09 67.0 194 29.4
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 3.3e-09 66.6 194 29.4
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 3.3e-09 66.6 181 26.0
FAN09G3563 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.7e-09 65.9 105 34.3
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.7e-09 65.9 184 25.5
CSS0033653 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 7.4e-09 65.5 92 45.7
FAN11G2121 Fragaria x ananassa HOM05D008321 ORTHO05D003768 9.7e-09 65.1 131 34.4
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 9.7e-09 65.1 186 28.0
FAN03G1875 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.3e-08 64.7 137 33.6
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.2e-08 63.9 236 26.3
MBI16_g00642_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 2.2e-08 63.9 111 35.1
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.7e-08 63.2 36 83.3
MBI06_g34258_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 3.7e-08 63.2 100 37.0
MBI16_g35338_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 4.8e-08 62.8 112 35.7
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 6.3e-08 62.4 229 26.6
MBI15_g20147_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 6.3e-08 62.4 111 38.7
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 1.4e-07 61.2 229 23.6
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 1.4e-07 61.2 231 23.8
PSO832G4314 Papaver somniferum HOM05D008526 ORTHO05D010380 1.4e-07 61.2 131 29.0
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 1.8e-07 60.8 211 27.5
MBI13_g16081_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 1.8e-07 60.8 214 26.6
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 1.8e-07 60.8 212 27.8
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.4e-07 60.5 177 29.9
Sed0001469 Sechium edule HOM05D007314 ORTHO05D003768 2.4e-07 60.5 113 38.1
Sed0011465 Sechium edule HOM05D007314 ORTHO05D003768 2.4e-07 60.5 113 38.1
MBI06_g10171_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 3.1e-07 60.1 207 29.5
TWI53G0470 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 4.1e-07 59.7 119 34.5
FAN28G0089 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.3e-07 59.3 115 33.0
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 5.3e-07 59.3 234 26.1
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 5.3e-07 59.3 195 25.6
MELO3C027838.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.9e-07 58.9 64 50.0
MBI10_g00087_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 6.9e-07 58.9 214 26.6
Oeu040990.1 Olea europaea HOM05D000700 ORTHO05D000397 6.9e-07 58.9 112 33.9
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.1e-07 58.5 187 28.9
CSS0018917 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 9.1e-07 58.5 71 47.9
CSS0036287 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 9.1e-07 58.5 71 47.9
FAN22G0652 Fragaria x ananassa HOM05D008321 ORTHO05D003768 9.1e-07 58.5 124 34.7
PSO170G0701 Papaver somniferum HOM05D008572 ORTHO05D010686 9.1e-07 58.5 235 23.0
Rhsim01G0043800 Rhododendron simsii HOM05D007314 ORTHO05D003768 9.1e-07 58.5 226 24.3
Nitab4.5_0001282g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-06 58.2 199 29.1
BolC4t24885H Brassica oleracea HOM05D031530 ORTHO05D023934 2.0e-06 57.4 121 33.9
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.6e-06 57.0 187 28.9
MBI11_g00976_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 2.6e-06 57.0 175 29.1
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 2.6e-06 57.0 214 28.5
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.4e-06 56.6 57 54.4
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 3.4e-06 56.6 127 29.9
Oeu060777.1 Olea europaea HOM05D009091 ORTHO05D003768 3.4e-06 56.6 65 47.7
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.5e-06 56.2 187 28.3
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.5e-06 56.2 174 30.5
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.5e-06 56.2 209 26.8
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 4.5e-06 56.2 133 32.3
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 5.9e-06 55.8 192 26.0
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.9e-06 55.8 183 26.8
FAN24G2086 Fragaria x ananassa HOM05D008321 ORTHO05D003768 7.7e-06 55.5 127 31.5
Oeu005258.1 Olea europaea HOM05D009091 ORTHO05D003768 7.7e-06 55.5 74 40.5


User provided reference genes

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