Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010946 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 2.8e-82 308.5 152 100.0
CSS0023833 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 5.0e-63 244.6 152 85.5
CSS0028282 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.5e-30 136.7 72 93.1
Nitab4.5_0012392g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 2.1e-29 132.9 72 88.9
QL06p010760 Quercus lobata HOM05D005806 ORTHO05D007119 1.0e-28 130.6 72 87.5
Nitab4.5_0002215g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 1.4e-28 130.2 72 86.1
Manes.03G199200 Manihot esculenta HOM05D005806 ORTHO05D007119 1.8e-28 129.8 72 86.1
Peaxi162Scf00065g01121 Petunia axillaris HOM05D005806 ORTHO05D007119 2.3e-28 129.4 72 86.1
Dinv44345 Davidia involucrata HOM05D005806 ORTHO05D007119 4.0e-28 128.6 72 86.1
Actinidia40301 Actinidia chinensis HOM05D005806 ORTHO05D007119 8.8e-28 127.5 72 86.1
Solyc01g066050.3 Solanum lycopersicum HOM05D005806 ORTHO05D007119 8.8e-28 127.5 72 86.1
Sopen01g027600 Solanum pennellii HOM05D005806 ORTHO05D007119 8.8e-28 127.5 72 86.1
PGSC0003DMG400016813 Solanum tuberosum HOM05D005806 ORTHO05D007119 8.8e-28 127.5 72 86.1
Prupe.1G130400 Prunus persica HOM05D005806 ORTHO05D007119 1.2e-27 127.1 72 83.3
arahy.Tifrunner.gnm1.ann1.T7VR84 Arachis hypogaea HOM05D005806 ORTHO05D007119 2.6e-27 125.9 72 83.3
arahy.Tifrunner.gnm1.ann1.TZ6N57 Arachis hypogaea HOM05D005806 ORTHO05D007119 2.6e-27 125.9 72 83.3
Cfa015433 Carpinus fangiana HOM05D005806 ORTHO05D007119 2.6e-27 125.9 72 83.3
Haze_01151 Corylus avellana HOM05D005806 ORTHO05D007119 2.6e-27 125.9 72 83.3
MD16G1163000 Malus domestica HOM05D005806 ORTHO05D007119 3.4e-27 125.6 72 83.3
CSS0004144 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 4.4e-27 125.2 72 84.7
CSS0038808 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 4.4e-27 125.2 72 84.7
Lj3A825T23 Lonicera japonica HOM05D005806 ORTHO05D007119 4.4e-27 125.2 72 83.3
TAR633G1904 Trochodendron aralioides HOM05D005806 ORTHO05D007119 4.4e-27 125.2 72 81.9
vmacro23238 Vaccinium macrocarpon HOM05D005806 ORTHO05D007119 4.4e-27 125.2 72 84.7
CAN.G14.19 Capsicum annuum HOM05D005806 ORTHO05D007119 5.7e-27 124.8 72 81.9
CiPaw.01G145000 Carya illinoinensis HOM05D005806 ORTHO05D007119 5.7e-27 124.8 72 83.3
Sabra10G0005700 Salix brachista HOM05D005806 ORTHO05D007119 5.7e-27 124.8 72 81.9
COL.COLO4_13808 Corchorus olitorius HOM05D005806 ORTHO05D007119 7.5e-27 124.4 72 81.9
FvH4_4g18770 Fragaria vesca HOM05D005806 ORTHO05D007119 7.5e-27 124.4 72 81.9
FAN07G1609 Fragaria x ananassa HOM05D005806 ORTHO05D007119 7.5e-27 124.4 72 81.9
FAN12G2548 Fragaria x ananassa HOM05D005806 ORTHO05D007119 7.5e-27 124.4 72 81.9
FAN12G3921 Fragaria x ananassa HOM05D005806 ORTHO05D007119 7.5e-27 124.4 72 81.9
FAN17G0801 Fragaria x ananassa HOM05D005806 ORTHO05D007119 7.5e-27 124.4 72 81.9
Lj4g0013254 Lotus japonicus HOM05D005806 ORTHO05D007119 7.5e-27 124.4 72 83.3
RcHm_v2.0_Chr4g0423561 Rosa chinensis HOM05D005806 ORTHO05D007119 7.5e-27 124.4 72 81.9
Lsat_1_v5_gn_6_78121 Lactuca sativa HOM05D005806 ORTHO05D007119 1.3e-26 123.6 72 80.6
Potri.010G007000 Populus trichocarpa HOM05D005806 ORTHO05D007119 1.3e-26 123.6 72 80.6
TAR365G0056 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.3e-26 123.6 71 80.3
TAR365G0831 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.3e-26 123.6 71 80.3
Medtr4g120360 Medicago truncatula HOM05D005806 ORTHO05D007119 1.7e-26 123.2 72 79.2
Nn3g21558 Nelumbo nucifera HOM05D005806 ORTHO05D007119 1.7e-26 123.2 72 79.2
Glyma.07G244900 Glycine max HOM05D005806 ORTHO05D007119 2.2e-26 122.9 72 80.6
Cpa.g.sc50.151 Carica papaya HOM05D005806 ORTHO05D007119 3.7e-26 122.1 72 80.6
Lalb_Chr07g0182271 Lupinus albus HOM05D005806 ORTHO05D007119 3.7e-26 122.1 72 79.2
Rhsim04G0227400 Rhododendron simsii HOM05D005806 ORTHO05D007119 3.7e-26 122.1 72 83.3
Sed0007282 Sechium edule HOM05D005806 ORTHO05D007119 3.7e-26 122.1 72 81.9
TAR362G1179 Trochodendron aralioides HOM05D005806 ORTHO05D007119 3.7e-26 122.1 72 79.2
MELO3C006687.2 Cucumis melo HOM05D005806 ORTHO05D007119 4.8e-26 121.7 72 80.6
ECA240G3979 Erigeron canadensis HOM05D005806 ORTHO05D007119 4.8e-26 121.7 72 77.8
Eucgr.B01574 Eucalyptus grandis HOM05D005806 ORTHO05D007119 4.8e-26 121.7 72 80.6
Nn4g25745 Nelumbo nucifera HOM05D005806 ORTHO05D007119 4.8e-26 121.7 72 80.6
SGA_v2.0_scaffold91G28032 Striga asiatica HOM05D005806 ORTHO05D007119 4.8e-26 121.7 72 80.6
CANSAT78G0145 Cannabis sativa HOM05D005806 ORTHO05D007119 6.3e-26 121.3 73 82.2
Ca_21476_v3 Cicer arietinum L. HOM05D005806 ORTHO05D007119 6.3e-26 121.3 72 80.6
Dinv29717 Davidia involucrata HOM05D005806 ORTHO05D007119 8.3e-26 120.9 72 80.6
Thecc.04G290100 Theobroma cacao HOM05D005806 ORTHO05D007119 8.3e-26 120.9 72 80.6
MSTRG.10119 Avicennia marina HOM05D005806 ORTHO05D007119 1.1e-25 120.6 72 80.6
ClCG05G006280 Citrullus lanatus HOM05D005806 ORTHO05D007119 1.1e-25 120.6 72 80.6
Duzib151G0580 Durio zibethinus HOM05D005806 ORTHO05D007119 1.1e-25 120.6 72 80.6
Lalb_Chr13g0298181 Lupinus albus HOM05D005806 ORTHO05D007119 1.1e-25 120.6 72 79.2
Duzib212G0552 Durio zibethinus HOM05D005806 ORTHO05D007119 1.4e-25 120.2 72 80.6
Glyma.17G028900 Glycine max HOM05D005806 ORTHO05D007119 1.4e-25 120.2 72 79.2
MD13G1163500 Malus domestica HOM05D005806 ORTHO05D007119 1.4e-25 120.2 71 80.3
Manes.15G010100 Manihot esculenta HOM05D005806 ORTHO05D007119 1.4e-25 120.2 72 80.6
Phvul.003G107800 Phaseolus vulgaris HOM05D005806 ORTHO05D007119 1.4e-25 120.2 72 76.4
CsaV3_3G014910 Cucumis sativus L. HOM05D005806 ORTHO05D007119 1.8e-25 119.8 71 80.3
Gohir.D10G172900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 1.8e-25 119.8 72 77.8
MBI18_g21793_MAGBIO Magnolia biondii HOM05D005806 ORTHO05D007119 2.4e-25 119.4 72 76.4
TWI73G0620 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 2.4e-25 119.4 72 79.2
Aa31LG8G3830 Aethionema arabicum HOM05D005806 ORTHO05D007119 3.1e-25 119.0 72 79.2
HanXRQChr03g0084151 Helianthus annuus HOM05D005806 ORTHO05D007119 3.1e-25 119.0 72 77.8
Oeu054004.1 Olea europaea HOM05D005806 ORTHO05D007119 3.1e-25 119.0 72 77.8
Ah.13g074780 Amaranthus hybridus HOM05D005806 ORTHO05D007119 4.1e-25 118.6 72 76.4
Gorai.011G193400 Gossypium raimondii HOM05D005806 ORTHO05D007119 4.1e-25 118.6 72 76.4
Psat4g025560 Pisum sativum HOM05D005806 ORTHO05D007119 4.1e-25 118.6 72 76.4
GSVIVG01035100001 Vitis vinifera HOM05D005806 ORTHO05D007119 4.1e-25 118.6 72 75.0
AUR62015254 Chenopodium quinoa HOM05D005806 ORTHO05D007119 5.4e-25 118.2 72 76.4
Oeu006424.1 Olea europaea HOM05D005806 ORTHO05D007119 5.4e-25 118.2 72 79.2
Aqoxy5G00792 Aquilegia oxysepala HOM05D005806 ORTHO05D007119 7.0e-25 117.9 72 77.8
AT3G16760 Arabidopsis thaliana HOM05D005806 ORTHO05D007119 7.0e-25 117.9 72 76.4
PGR031G2493 Punica granatum HOM05D005806 ORTHO05D007119 7.0e-25 117.9 72 80.6
VMungo1215G2854 Vigna mungo HOM05D005806 ORTHO05D007119 7.0e-25 117.9 72 75.0
Ciclev10004804m.g Citrus clementina HOM05D005806 ORTHO05D007119 9.1e-25 117.5 72 77.8
Thhalv10020624m.g Eutrema salsugineum HOM05D005806 ORTHO05D007119 9.1e-25 117.5 72 77.8
Gohir.A10G166900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 9.1e-25 117.5 71 77.5
THA.LOC104802587 Tarenaya hassleriana HOM05D005806 ORTHO05D007119 9.1e-25 117.5 72 77.8
CARHR092010 Cardamine hirsuta HOM05D005806 ORTHO05D007119 1.6e-24 116.7 72 76.4
Cc03_g01460 Coffea canephora HOM05D005806 ORTHO05D007119 1.6e-24 116.7 72 75.0
DCAR_002485 Daucus carota HOM05D005806 ORTHO05D007119 1.6e-24 116.7 72 75.0
SalBow5G0238 Salvia bowleyana HOM05D005806 ORTHO05D007119 2.0e-24 116.3 72 75.0
Migut.N00070 Erythranthe guttata HOM05D005806 ORTHO05D007119 2.7e-24 115.9 72 76.4
Sp3g15010 Schrenkiella parvula HOM05D005806 ORTHO05D007119 2.7e-24 115.9 72 76.4
Sc13g0003160 Simmondsia chinensis HOM05D005806 ORTHO05D007119 3.5e-24 115.5 97 60.8
Atru.chr4.2914 Acer truncatum HOM05D005806 ORTHO05D007119 4.5e-24 115.2 72 76.4
PSO210G6439 Papaver somniferum HOM05D005806 ORTHO05D007119 4.5e-24 115.2 72 75.0
PSO832G4515 Papaver somniferum HOM05D005806 ORTHO05D007119 4.5e-24 115.2 72 75.0
AUR62018055 Chenopodium quinoa HOM05D005806 ORTHO05D007119 7.7e-24 114.4 72 73.6
C01p47550 Brassica napus HOM05D005806 ORTHO05D007119 1.0e-23 114.0 69 78.3
BolC1t04724H Brassica oleracea HOM05D005806 ORTHO05D007119 1.0e-23 114.0 69 78.3
HanXRQChr13g0413981 Helianthus annuus HOM05D005806 ORTHO05D007119 1.0e-23 114.0 72 76.4
TWI09G1342 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 1.0e-23 114.0 72 75.0
BcaC09g48634 Brassica carinata HOM05D005806 ORTHO05D007119 2.2e-23 112.8 69 78.3
A01p37530 Brassica napus HOM05D005806 ORTHO05D007119 2.2e-23 112.8 69 78.3
BraA01t03813Z Brassica rapa HOM05D005806 ORTHO05D007119 2.2e-23 112.8 69 78.3
Carub.0003s1647 Capsella rubella HOM05D005806 ORTHO05D007119 2.9e-23 112.5 69 76.8
EL10Ac3g06659 Beta vulgaris HOM05D005806 ORTHO05D007119 5.0e-23 111.7 73 74.0
Hund20516 Selenicereus undatus HOM05D005806 ORTHO05D007119 1.1e-22 110.5 72 72.2
CDE01G0725 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 1.5e-22 110.2 72 68.1
HPP92_002231 Vanilla planifolia HOM05D005806 ORTHO05D007119 2.5e-22 109.4 72 69.4
Zm00001eb016320 Zea mays HOM05D005806 ORTHO05D007119 7.2e-22 107.8 72 70.8
Os03g0340700 Oryza sativa ssp. japonica HOM05D005806 ORTHO05D007119 1.6e-21 106.7 72 69.4
SEGI_25850 Sequoiadendron giganteum HOM05D005806 ORTHO05D007119 4.7e-21 105.1 73 65.8
SMO334G0099 Selaginella moellendorffii HOM05D005806 ORTHO05D007119 5.4e-17 91.7 84 54.8
SGA_v2.0_scaffold119G32699 Striga asiatica HOM05D005806 ORTHO05D007119 1.2e-16 90.5 98 53.1
AagrBONN_evm.TU.Sc2ySwM_228.3483 Anthoceros agrestis HOM05D005806 ORTHO05D007119 4.5e-16 88.6 72 58.3
CDE12G0749 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 5.0e-15 85.1 60 70.0
Pp3c4_12130 Physcomitrium patens HOM05D005806 ORTHO05D007119 4.7e-13 78.6 72 52.8
Mapoly0005s0119 Marchantia polymorpha HOM05D005806 ORTHO05D007119 1.5e-11 73.6 69 52.2
Pp3c12_16600 Physcomitrium patens HOM05D005806 ORTHO05D007119 9.8e-11 70.9 94 42.6
CBR_g31779 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-10 70.1 82 37.8
CBR_g39021 Chara braunii HOM05D000003 ORTHO05D000004 3.2e-09 65.9 82 36.6
CBR_g4056 Chara braunii HOM05D005806 ORTHO05D007119 2.7e-08 62.8 77 42.9
HPP92_002153 Vanilla planifolia HOM05D005806 ORTHO05D007119 2.3e-07 59.7 38 73.7


User provided reference genes

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