Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 6.7e-276 953.4 473 100.0
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 3.7e-226 788.1 461 83.9
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 3.4e-219 765.0 461 81.6
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 1.6e-213 746.1 462 77.7
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 7.6e-211 737.3 465 76.8
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 6.4e-210 734.2 458 79.7
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 2.4e-209 732.3 515 73.0
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 4.2e-209 731.5 466 76.4
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 2.5e-206 722.2 463 75.6
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 1.6e-205 719.5 465 74.8
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 8.1e-205 717.2 465 74.6
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 4.5e-203 711.4 463 74.7
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 4.5e-203 711.4 465 74.8
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 1.7e-202 709.5 459 74.3
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 6.0e-200 701.0 465 73.5
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 5.1e-199 698.0 534 67.4
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 1.9e-198 696.0 464 71.6
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 2.5e-198 695.7 460 72.6
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 4.8e-197 691.4 465 71.2
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 6.2e-197 691.0 465 71.2
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 3.4e-195 685.3 468 71.4
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 9.9e-195 683.7 450 74.7
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 1.7e-194 682.9 465 69.9
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 4.2e-193 678.3 456 72.4
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 4.6e-192 674.9 458 72.1
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 1.8e-191 672.9 455 72.3
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 3.9e-191 671.8 455 70.8
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 8.7e-191 670.6 463 70.2
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 1.9e-190 669.5 465 70.3
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 1.9e-190 669.5 469 69.9
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 2.5e-190 669.1 445 73.3
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 7.4e-190 667.5 462 70.6
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 9.6e-190 667.2 464 69.8
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 2.1e-189 666.0 467 69.8
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 1.4e-188 663.3 458 69.2
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 1.4e-188 663.3 458 69.2
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 1.4e-188 663.3 457 71.6
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 1.4e-188 663.3 454 71.8
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 1.8e-188 662.9 454 71.6
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.2e-187 660.2 456 69.1
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 1.5e-187 659.8 467 69.2
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 7.6e-187 657.5 459 70.2
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 1.1e-185 653.7 456 69.7
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.9e-185 652.9 462 69.3
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 4.2e-185 651.7 458 68.3
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 7.1e-185 651.0 459 69.5
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 1.6e-184 649.8 463 68.7
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 2.1e-184 649.4 560 60.7
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 3.5e-184 648.7 447 68.9
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 7.4e-182 641.0 453 67.5
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.3e-181 640.2 471 66.5
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 1.1e-180 637.1 454 67.0
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 3.4e-179 632.1 462 65.8
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 5.9e-179 631.3 439 68.6
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 1.7e-178 629.8 456 67.3
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 8.5e-178 627.5 453 66.2
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 1.9e-177 626.3 455 65.3
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 1.6e-176 623.2 450 66.0
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 1.6e-176 623.2 424 69.8
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 3.6e-176 622.1 453 64.2
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 1.8e-175 619.8 461 66.4
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 5.1e-175 618.2 455 64.6
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 2.5e-174 615.9 455 64.8
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 1.1e-172 610.5 437 70.9
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 5.3e-172 608.2 453 64.5
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.0e-170 604.0 451 64.3
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.0e-170 604.0 451 64.3
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 2.9e-170 602.4 455 63.5
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 2.9e-170 602.4 473 62.2
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 2.5e-169 599.4 434 68.9
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 3.2e-169 599.0 451 63.6
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 7.2e-169 597.8 451 63.9
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.6e-168 596.7 451 63.6
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 4.7e-168 595.1 456 62.5
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 4.7e-168 595.1 429 65.0
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 1.0e-167 594.0 473 60.9
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 8.8e-167 590.9 455 62.0
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 8.8e-167 590.9 397 72.3
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 1.5e-166 590.1 455 61.5
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 2.0e-166 589.7 455 61.8
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 2.0e-166 589.7 455 61.8
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 1.3e-165 587.0 455 61.8
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 1.4e-164 583.6 455 59.8
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 2.0e-163 579.7 394 72.3
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 4.2e-161 572.0 475 58.9
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 2.6e-158 562.8 395 69.6
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 3.7e-157 558.9 372 71.0
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 2.4e-156 556.2 469 61.6
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 8.5e-154 547.7 467 58.0
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 2.6e-150 536.2 390 66.2
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 8.2e-149 531.2 396 65.2
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 2.5e-137 493.0 450 56.4
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 2.8e-136 489.6 308 74.7
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 6.1e-136 488.4 472 56.4
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 2.4e-132 476.5 333 69.7
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 4.9e-125 452.2 306 73.2
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 1.7e-122 443.7 309 68.0
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 2.3e-119 433.3 403 52.4
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 2.4e-103 380.2 320 59.7
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 3.9e-98 362.8 252 70.2
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 3.9e-98 362.8 252 70.2
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 2.6e-86 323.6 456 40.1
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 9.0e-71 271.9 370 40.5
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 1.6e-67 261.2 207 64.7
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 2.1e-67 260.8 184 70.7
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 7.4e-65 252.3 215 59.5
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 1.0e-37 162.2 112 69.6
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 2.4e-31 141.0 108 63.0
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 3.3e-20 104.0 68 70.6
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 3.6e-19 100.5 68 69.1
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 2.2e-16 91.3 80 55.0


User provided reference genes

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