Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.3e-182 642.1 335 100.0
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.1e-146 522.7 357 79.0
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.4e-134 483.4 333 81.7
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.5e-132 474.6 348 76.4
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.0e-77 293.5 342 57.3
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.4e-62 243.4 297 50.5
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.6e-61 240.7 293 50.5
CSS0001367 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.3e-55 221.1 298 46.0
CSS0007087 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 8.7e-44 181.8 172 60.5
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.1e-41 174.9 200 47.5
CSS0015616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.9e-39 166.8 174 56.3
CSS0019759 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.7e-37 160.2 167 58.1
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.7e-31 141.0 215 38.6
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.1e-30 138.3 209 38.8
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.1e-28 129.4 230 33.0
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.5e-27 127.1 205 37.6
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 9.7e-27 125.2 205 36.1
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.1e-25 121.7 190 34.7
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.8e-23 113.2 191 36.1
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-21 108.2 192 34.4
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 5.1e-20 102.8 186 31.2
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.5e-19 101.3 216 29.6
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.7e-19 99.4 196 35.7
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.8e-18 97.1 212 33.0
Rhsim10G0179100 Rhododendron simsii HOM05D009300 ORTHO05D010234 4.8e-18 96.3 105 50.5
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.8e-18 96.3 280 29.6
vmacro14701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.1e-17 95.1 178 36.5
vmacro14771 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.1e-17 95.1 178 36.5
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.4e-17 94.7 108 45.4
RhsimUnG0025000 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.4e-17 94.0 149 36.2
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.3e-17 92.8 200 32.5
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 1.2e-16 91.7 165 33.9
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-16 90.9 199 31.7
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.5e-16 89.7 149 38.9
CSS0036223 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.3e-15 88.2 68 60.3
Rhsim11G0014100 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.9e-15 87.0 110 46.4
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.0e-15 86.3 163 31.3
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 6.5e-15 85.9 178 29.2
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 1.1e-14 85.1 192 29.7
Rhsim12G0114600 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.9e-14 84.3 229 28.4
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.1e-13 79.3 145 32.4
TWI18G1095 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 2.3e-12 77.4 191 30.4
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 3.0e-12 77.0 197 32.5
Rhsim09G0079100 Rhododendron simsii HOM05D009565 ORTHO05D012252 3.0e-12 77.0 191 28.8
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 5.1e-12 76.3 189 28.0
Rhsim11G0024200 Rhododendron simsii HOM05D009565 ORTHO05D012252 6.7e-12 75.9 234 27.8
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.8e-12 75.5 197 32.0
TWI73G1228 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 1.5e-11 74.7 190 30.0
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 2.0e-11 74.3 191 27.7
TWI59G0531 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 2.6e-11 73.9 191 29.8
CSS0020531 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 9.7e-11 72.0 33 90.9
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.8e-10 70.5 81 45.7
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.8e-10 70.5 81 45.7
CSS0034635 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D003213 2.8e-10 70.5 55 61.8
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.8e-10 70.5 81 45.7
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.8e-10 70.5 81 45.7
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 3.7e-10 70.1 70 48.6
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.7e-10 70.1 73 45.2
Dinv18594 Davidia involucrata HOM05D000791 ORTHO05D000669 8.2e-10 68.9 263 26.2
MBI15_g01162_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.2e-10 68.9 167 28.7
Peaxi162Scf00524g00083 Petunia axillaris HOM05D003120 ORTHO05D003568 8.2e-10 68.9 166 28.3
Rhsim09G0074300 Rhododendron simsii HOM05D000791 ORTHO05D000669 1.1e-09 68.6 181 27.6
Peaxi162Scf00085g00199 Petunia axillaris HOM05D003120 ORTHO05D003568 4.1e-09 66.6 166 28.3
Peaxi162Scf00250g00511 Petunia axillaris HOM05D003120 ORTHO05D003568 4.1e-09 66.6 166 28.3
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 5.3e-09 66.2 94 42.6
CSS0002050 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 9.1e-09 65.5 59 55.9
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 9.1e-09 65.5 81 42.0
Dinv13764 Davidia involucrata HOM05D011313 ORTHO05D013316 1.5e-08 64.7 146 28.8
Nitab4.5_0003305g0030 Nicotiana tabacum HOM05D003120 ORTHO05D003568 4.5e-08 63.2 210 26.2
CSS0011165 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.9e-08 62.8 121 51.2
CSS0019851 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.9e-08 62.8 121 51.2
Peaxi162Scf00091g00169 Petunia axillaris HOM05D003120 ORTHO05D003568 5.9e-08 62.8 203 27.1
RcHm_v2.0_Chr4g0410891 Rosa chinensis HOM05D008705 ORTHO05D000669 5.9e-08 62.8 192 26.6
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 1.0e-07 62.0 283 23.7
FAN20G1055 Fragaria x ananassa HOM05D008705 ORTHO05D001863 1.0e-07 62.0 175 26.9
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 1.3e-07 61.6 283 23.3
vmacro01281 Vaccinium macrocarpon HOM05D017301 ORTHO05D000669 1.3e-07 61.6 161 26.7
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 1.7e-07 61.2 283 23.7
Nitab4.5_0006444g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.9e-07 60.5 207 25.1
Nitab4.5_0008225g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.9e-07 60.5 185 25.9
CSS0007628 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 5.0e-07 59.7 29 86.2
MBI07_g03727_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.9e-06 57.8 104 33.7
RcHm_v2.0_Chr1g0381191 Rosa chinensis HOM05D008705 ORTHO05D000669 1.9e-06 57.8 180 26.1
CSS0027658 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.2e-06 56.6 61 50.8
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.2e-06 56.6 50 54.0
Peaxi162Scf00878g00111 Petunia axillaris HOM05D003120 ORTHO05D003568 5.5e-06 56.2 166 25.3
vmacro12701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 5.5e-06 56.2 128 32.0
FvH4_6g23072 Fragaria vesca HOM05D009879 ORTHO05D009647 7.2e-06 55.8 128 28.1
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 7.2e-06 55.8 135 33.3
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 7.2e-06 55.8 180 25.0


User provided reference genes

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