Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.7e-177 625.2 309 100.0
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.2e-101 372.1 310 63.5
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 9.3e-101 370.9 322 62.1
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.0e-99 365.9 305 65.2
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.3e-94 350.5 311 60.8
CSS0029307 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 6.3e-89 331.6 296 61.8
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.0e-55 220.3 309 45.0
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 1.3e-54 217.6 304 45.1
CSS0042755 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.2e-51 205.7 301 42.5
CSS0034581 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 9.8e-42 174.9 223 47.5
CSS0047661 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.5e-39 166.4 225 44.4
CSS0025888 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.1e-29 134.8 297 35.0
CSS0031884 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.8e-27 127.5 189 41.3
Cfa016030 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.7e-17 94.4 133 39.8
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 4.9e-17 92.8 136 39.7
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 6.4e-17 92.4 103 42.7
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 8.4e-17 92.0 133 41.4
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 2.4e-16 90.5 114 38.6
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 2.4e-16 90.5 114 41.2
QL09p028133 Quercus lobata HOM05D009378 ORTHO05D010101 2.4e-16 90.5 248 28.6
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 3.2e-16 90.1 136 37.5
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 5.4e-16 89.4 128 35.9
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 7.1e-16 89.0 98 42.9
QL04p029513 Quercus lobata HOM05D000125 ORTHO05D000120 7.1e-16 89.0 100 44.0
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 9.2e-16 88.6 109 40.4
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 2.7e-15 87.0 109 39.4
QL04p029700 Quercus lobata HOM05D020596 ORTHO05D010101 2.7e-15 87.0 134 35.8
QL04p029779 Quercus lobata HOM05D020596 ORTHO05D010101 3.5e-15 86.7 99 42.4
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 3.5e-15 86.7 127 36.2
Cfa016029 Carpinus fangiana HOM05D009378 ORTHO05D010101 7.8e-15 85.5 180 31.7
Cpa.g.sc623.3 Carica papaya HOM05D009378 ORTHO05D010101 1.0e-14 85.1 191 30.4
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 1.3e-14 84.7 130 38.5
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.7e-14 84.3 209 27.8
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 2.3e-14 84.0 218 31.7
Haze_00511 Corylus avellana HOM05D009378 ORTHO05D010101 3.0e-14 83.6 104 39.4
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 3.0e-14 83.6 136 37.5
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 5.1e-14 82.8 114 38.6
QL93p0209_0042 Quercus lobata HOM05D009378 ORTHO05D010101 5.1e-14 82.8 114 38.6
Actinidia13804 Actinidia chinensis HOM05D000125 ORTHO05D030879 6.6e-14 82.4 143 33.6
Ciclev10014060m.g Citrus clementina HOM05D000125 ORTHO05D000120 6.6e-14 82.4 190 28.4
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 6.6e-14 82.4 136 36.8
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 8.6e-14 82.0 211 28.4
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 3.3e-13 80.1 220 31.8
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 1.2e-12 78.2 104 36.5
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 1.2e-12 78.2 104 36.5
Actinidia02169 Actinidia chinensis HOM05D000125 ORTHO05D030879 4.7e-12 76.3 118 36.4
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 4.7e-12 76.3 113 39.8
Actinidia13806 Actinidia chinensis HOM05D000125 ORTHO05D030879 8.1e-12 75.5 203 26.1
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.1e-11 75.1 102 36.3
Cpa.g.sc623.1 Carica papaya HOM05D009378 ORTHO05D010101 8.9e-11 72.0 101 41.6
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 8.9e-11 72.0 177 24.9
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 8.9e-11 72.0 104 33.7
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 1.5e-10 71.2 101 30.7
PGR044G2047 Punica granatum HOM05D009378 ORTHO05D010101 3.4e-10 70.1 119 35.3
Sed0024411 Sechium edule HOM05D024292 ORTHO05D010101 4.4e-10 69.7 299 23.7
Rhsim13G0216300 Rhododendron simsii HOM05D000448 ORTHO05D000291 2.9e-09 67.0 288 26.0
PGR042G0442 Punica granatum HOM05D000125 ORTHO05D000807 8.4e-09 65.5 103 34.0
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 1.1e-08 65.1 103 34.0
Eucgr.E00393 Eucalyptus grandis HOM05D000125 ORTHO05D000120 5.4e-08 62.8 214 29.0
ClCG01G004320 Citrullus lanatus HOM05D024292 ORTHO05D010101 7.1e-08 62.4 111 32.4
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 2.1e-07 60.8 101 31.7
ClCG01G004310 Citrullus lanatus HOM05D024292 ORTHO05D010101 1.3e-06 58.2 111 28.8
Haze_00401 Corylus avellana HOM05D009378 ORTHO05D010101 5.1e-06 56.2 49 53.1
CANSAT11G2008 Cannabis sativa HOM05D000125 ORTHO05D010101 6.6e-06 55.8 209 23.4


User provided reference genes

Program Settings