Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005375 Camellia sinensis var. sinensis HOM05D018231 ORTHO05D010439 2.2e-45 185.3 92 100.0
CSS0010853 Camellia sinensis var. sinensis HOM05D018231 ORTHO05D010439 2.2e-45 185.3 92 100.0
CSS0012144 Camellia sinensis var. sinensis HOM05D018231 ORTHO05D010439 2.2e-45 185.3 92 100.0
CSS0003493 Camellia sinensis var. sinensis HOM05D018231 ORTHO05D010439 4.7e-40 167.5 92 92.4
CSS0046948 Camellia sinensis var. sinensis HOM05D018231 ORTHO05D010439 4.0e-31 137.9 96 80.2
Manes.11G101800 Manihot esculenta HOM05D009305 ORTHO05D010439 5.9e-11 70.9 92 51.1
Rhsim01G0078400 Rhododendron simsii HOM05D003010 ORTHO05D010439 1.0e-10 70.1 96 51.0
Nn8g39368 Nelumbo nucifera HOM05D003010 ORTHO05D010439 1.3e-10 69.7 93 52.7
Cfa003337 Carpinus fangiana HOM05D003010 ORTHO05D010439 5.0e-10 67.8 94 53.2
Cc06_g08930 Coffea canephora HOM05D018231 ORTHO05D010439 6.6e-10 67.4 90 46.7
TAR625G0712 Trochodendron aralioides HOM05D003010 ORTHO05D010439 6.6e-10 67.4 93 48.4
DCAR_009212 Daucus carota HOM05D000639 ORTHO05D005966 1.1e-09 66.6 92 48.9
Ciclev10010147m.g Citrus clementina HOM05D003010 ORTHO05D010439 3.3e-09 65.1 93 48.4
HanXRQChr08g0229131 Helianthus annuus HOM05D003010 ORTHO05D003623 9.5e-09 63.5 91 46.2
Haze_25626 Corylus avellana HOM05D003010 ORTHO05D010439 1.6e-08 62.8 95 49.5
CiPaw.04G169500 Carya illinoinensis HOM05D009305 ORTHO05D010439 4.7e-08 61.2 90 50.0
HanXRQChr10g0316761 Helianthus annuus HOM05D003010 ORTHO05D003623 6.1e-08 60.8 92 46.7
Oeu017218.3 Olea europaea HOM05D003010 ORTHO05D003623 1.0e-07 60.1 93 40.9
QL02p087437 Quercus lobata HOM05D009305 ORTHO05D010439 1.0e-07 60.1 90 51.1
Duzib205G1418 Durio zibethinus HOM05D003010 ORTHO05D003623 1.4e-07 59.7 92 37.0
PSO339G5114 Papaver somniferum HOM05D003010 ORTHO05D010439 2.3e-07 58.9 99 42.4
PSO801G0586 Papaver somniferum HOM05D003010 ORTHO05D003623 2.3e-07 58.9 99 42.4
Thecc.09G121000 Theobroma cacao HOM05D029830 ORTHO05D010439 2.3e-07 58.9 93 46.2
EL10Ac5g12296 Beta vulgaris HOM05D003010 ORTHO05D003623 3.0e-07 58.5 91 38.5
Prupe.7G238200 Prunus persica HOM05D009305 ORTHO05D010439 3.0e-07 58.5 97 45.4
FAN26G0439 Fragaria x ananassa HOM05D009305 ORTHO05D010439 4.0e-07 58.2 90 43.3
Gohir.D08G184800 Gossypium hirsutum HOM05D003010 ORTHO05D003623 4.0e-07 58.2 96 38.5
Atru.chr7.1234 Acer truncatum HOM05D009305 ORTHO05D010439 5.2e-07 57.8 101 46.5
Lsat_1_v5_gn_5_97941 Lactuca sativa HOM05D003010 ORTHO05D003623 5.2e-07 57.8 96 40.6
TWI81G0439 Tripterygium wilfordii HOM05D003010 ORTHO05D003623 6.8e-07 57.4 92 39.1
Cpa.g.sc13.241 Carica papaya HOM05D003010 ORTHO05D003623 1.2e-06 56.6 88 38.6
Aqoxy7G02055 Aquilegia oxysepala HOM05D003010 ORTHO05D003623 2.0e-06 55.8 89 42.7
Gorai.004G194100 Gossypium raimondii HOM05D003010 ORTHO05D003623 2.0e-06 55.8 96 37.5
ECA234G2671 Erigeron canadensis HOM05D003010 ORTHO05D010439 2.6e-06 55.5 92 42.4
FAN19G2542 Fragaria x ananassa HOM05D009305 ORTHO05D010439 2.6e-06 55.5 98 42.9
RcHm_v2.0_Chr2g0089271 Rosa chinensis HOM05D009305 ORTHO05D010439 2.6e-06 55.5 90 41.1
CDE01G0248 Ceratophyllum demersum HOM05D003010 ORTHO05D003623 3.4e-06 55.1 96 35.4
Gohir.A08G165900 Gossypium hirsutum HOM05D003010 ORTHO05D003623 3.4e-06 55.1 92 35.9
COL.COLO4_35181 Corchorus olitorius HOM05D018231 ORTHO05D010439 4.4e-06 54.7 103 41.7
Sed0015404 Sechium edule HOM05D009305 ORTHO05D010439 7.5e-06 53.9 84 47.6


User provided reference genes

Program Settings