Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010822 Camellia sinensis var. sinensis HOM05D001237 ORTHO05D009110 5.8e-186 654.1 327 100.0
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 9.1e-147 523.9 328 80.8
Rhsim07G0137000 Rhododendron simsii HOM05D001237 ORTHO05D009110 1.6e-146 523.1 332 80.7
Actinidia18147 Actinidia chinensis HOM05D001237 ORTHO05D009110 3.6e-143 511.9 329 80.5
GSVIVG01022633001 Vitis vinifera HOM05D001237 ORTHO05D009110 1.3e-137 493.4 328 76.5
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 2.3e-134 482.6 328 75.3
TAR629G2165 Trochodendron aralioides HOM05D001237 ORTHO05D009110 8.8e-134 480.7 328 74.7
Hma1.2p1_0979F.1_g243590 Hydrangea macrophylla HOM05D001237 ORTHO05D009110 1.2e-130 470.3 340 73.2
CiPaw.12G070700 Carya illinoinensis HOM05D001237 ORTHO05D009110 1.3e-129 466.8 328 73.5
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 8.6e-129 464.2 342 71.1
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 8.9e-126 454.1 329 72.6
Cc00_g24190 Coffea canephora HOM05D001237 ORTHO05D009110 4.4e-125 451.8 328 71.0
Dinv15842 Davidia involucrata HOM05D001237 ORTHO05D009110 9.8e-125 450.7 300 76.0
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 2.8e-124 449.1 328 70.7
FAN08G1241 Fragaria x ananassa HOM05D001237 ORTHO05D009110 7.0e-123 444.5 328 69.8
Oeu038592.1 Olea europaea HOM05D001237 ORTHO05D009110 7.0e-123 444.5 321 73.5
FAN18G3541 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.2e-122 443.7 328 69.8
Solyc08g075990.3 Solanum lycopersicum HOM05D001237 ORTHO05D009110 1.2e-122 443.7 328 69.8
FAN18G4185 Fragaria x ananassa HOM05D001237 ORTHO05D009110 3.5e-122 442.2 328 69.5
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 4.5e-122 441.8 280 77.5
FvH4_5g23760 Fragaria vesca HOM05D001237 ORTHO05D009110 4.5e-122 441.8 328 69.5
RcHm_v2.0_Chr7g0213081 Rosa chinensis HOM05D001237 ORTHO05D009110 4.5e-122 441.8 330 69.4
CAN.G773.2 Capsicum annuum HOM05D001237 ORTHO05D009110 5.9e-122 441.4 328 70.1
Nitab4.5_0002735g0030 Nicotiana tabacum HOM05D001237 ORTHO05D009110 1.0e-121 440.7 315 70.8
Cfa012569 Carpinus fangiana HOM05D001237 ORTHO05D009110 2.3e-121 439.5 286 77.6
Prupe.5G022700 Prunus persica HOM05D001237 ORTHO05D009110 5.6e-120 434.9 335 69.6
Nitab4.5_0001033g0010 Nicotiana tabacum HOM05D001237 ORTHO05D009110 7.3e-120 434.5 278 77.7
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 2.1e-119 433.0 305 71.8
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 1.4e-118 430.3 328 68.9
Potri.003G100300 Populus trichocarpa HOM05D001237 ORTHO05D009110 1.4e-118 430.3 330 70.3
Cpa.g.sc24.66 Carica papaya HOM05D001237 ORTHO05D009110 4.0e-118 428.7 330 68.8
Migut.E01337 Erythranthe guttata HOM05D001237 ORTHO05D009110 2.2e-116 422.9 334 67.7
PGR042G3955 Punica granatum HOM05D001237 ORTHO05D009110 6.4e-116 421.4 333 69.1
Sc07g0008510 Simmondsia chinensis HOM05D001237 ORTHO05D009110 6.4e-116 421.4 329 68.4
THA.LOC104812764 Tarenaya hassleriana HOM05D001237 ORTHO05D009110 6.4e-116 421.4 277 76.2
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 8.3e-116 421.0 279 76.0
Lj2g0015654 Lotus japonicus HOM05D001237 ORTHO05D009110 1.9e-115 419.9 332 68.4
EL10Ac5g11946 Beta vulgaris HOM05D001237 ORTHO05D009110 9.2e-115 417.5 333 65.2
MELO3C013804.2 Cucumis melo HOM05D001237 ORTHO05D009110 1.2e-114 417.2 336 67.3
DCAR_024946 Daucus carota HOM05D001577 ORTHO05D009110 1.2e-114 417.2 272 76.8
PSO782G3536 Papaver somniferum HOM05D001237 ORTHO05D009110 2.7e-114 416.0 293 72.0
ECA233G0844 Erigeron canadensis HOM05D001237 ORTHO05D009110 6.0e-114 414.8 329 67.8
Phvul.002G132200 Phaseolus vulgaris HOM05D001237 ORTHO05D009110 7.8e-114 414.5 330 67.3
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 1.0e-113 414.1 278 73.7
Duzib084G0831 Durio zibethinus HOM05D001237 ORTHO05D009110 1.0e-113 414.1 297 70.4
CANSAT25G2402 Cannabis sativa HOM05D001237 ORTHO05D009110 1.3e-113 413.7 275 76.4
CsaV3_3G001140 Cucumis sativus L. HOM05D001237 ORTHO05D009110 1.3e-113 413.7 327 67.0
TPR.G29137 Trifolium pratense HOM05D001237 ORTHO05D009110 1.7e-113 413.3 271 77.5
Eucgr.E01249 Eucalyptus grandis HOM05D001237 ORTHO05D009110 3.0e-113 412.5 277 74.0
Sed0014021 Sechium edule HOM05D001237 ORTHO05D009110 3.9e-113 412.1 331 67.4
COL.COLO4_27340 Corchorus olitorius HOM05D001237 ORTHO05D009110 6.6e-113 411.4 285 72.3
Psat2g141080 Pisum sativum HOM05D001237 ORTHO05D009110 6.6e-113 411.4 313 68.4
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 1.1e-112 410.6 292 70.9
Lalb_Chr05g0215521 Lupinus albus HOM05D001237 ORTHO05D009110 1.5e-112 410.2 323 66.3
Medtr5g027220 Medicago truncatula HOM05D001237 ORTHO05D009110 1.5e-112 410.2 317 69.1
Gohir.A08G151200 Gossypium hirsutum HOM05D001237 ORTHO05D009110 1.9e-112 409.8 278 74.1
AUR62007400 Chenopodium quinoa HOM05D001237 ORTHO05D009110 4.3e-112 408.7 335 65.1
Thhalv10004626m.g Eutrema salsugineum HOM05D001237 ORTHO05D009110 5.6e-112 408.3 290 70.0
Gorai.004G179700 Gossypium raimondii HOM05D001237 ORTHO05D009110 1.2e-111 407.1 277 74.0
VMungo1215G0366 Vigna mungo HOM05D001237 ORTHO05D000217 1.6e-111 406.8 331 65.9
A06p38920 Brassica napus HOM05D001237 ORTHO05D009110 1.4e-110 403.7 292 69.2
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 1.4e-110 403.7 292 68.5
BraA06t26806Z Brassica rapa HOM05D001237 ORTHO05D009110 4.0e-110 402.1 290 69.3
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 6.8e-110 401.4 279 71.7
Ah.07g201260 Amaranthus hybridus HOM05D001237 ORTHO05D009110 8.9e-110 401.0 267 75.7
C07p39410 Brassica napus HOM05D001237 ORTHO05D009110 8.9e-110 401.0 292 69.2
Lsat_1_v5_gn_6_17621 Lactuca sativa HOM05D001237 ORTHO05D009110 1.2e-109 400.6 336 63.7
ATR0829G072 Amborella trichopoda HOM05D001237 ORTHO05D009110 8.3e-108 394.4 288 69.4
Aa31LG9G15560 Aethionema arabicum HOM05D001237 ORTHO05D009110 1.4e-107 393.7 299 67.6
Ca_25144_v3 Cicer arietinum L. HOM05D001237 ORTHO05D000217 1.4e-107 393.7 251 78.5
Glyma.01G147700 Glycine max HOM05D001237 ORTHO05D009110 2.7e-106 389.4 330 64.8
Zm00001eb208900 Zea mays HOM05D001237 ORTHO05D009110 7.8e-106 387.9 256 75.4
BolC7t44460H Brassica oleracea HOM05D001237 ORTHO05D009110 1.3e-105 387.1 282 68.4
Peaxi162Scf00408g00416 Petunia axillaris HOM05D001237 ORTHO05D009110 1.2e-103 380.6 278 71.6
CDE02G0540 Ceratophyllum demersum HOM05D001237 ORTHO05D009110 8.9e-102 374.4 279 68.8
Glyma.20G094800 Glycine max HOM05D001237 ORTHO05D009110 3.2e-99 365.9 230 80.0
BcaC06g30758 Brassica carinata HOM05D001237 ORTHO05D009110 1.7e-97 360.1 292 64.0
Sabra03G0068500 Salix brachista HOM05D001237 ORTHO05D009110 8.1e-95 351.3 339 60.5
HanXRQChr08g0226791 Helianthus annuus HOM05D001237 ORTHO05D009110 4.0e-94 349.0 288 64.9
ClCG10G001120 Citrullus lanatus HOM05D001237 ORTHO05D009110 1.9e-91 340.1 328 59.8
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 5.4e-91 338.6 267 62.2
CARHR182950 Cardamine hirsuta HOM05D001237 ORTHO05D009110 3.9e-89 332.4 217 74.7
SGA_v2.0_scaffold111G31373 Striga asiatica HOM05D001237 ORTHO05D009110 1.1e-88 330.9 207 79.2
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 9.0e-86 321.2 281 57.7
unitig_747.g21357 Utricularia gibba HOM05D000467 ORTHO05D000379 2.7e-82 309.7 237 67.1
SMO356G0709 Selaginella moellendorffii HOM05D001237 ORTHO05D009110 6.2e-79 298.5 265 53.2
CBR_g18855 Chara braunii HOM05D001237 ORTHO05D009110 1.9e-72 276.9 219 60.7
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis HOM05D001237 ORTHO05D009110 6.2e-71 271.9 245 54.7
arahy.Tifrunner.gnm1.ann1.3EKV6C Arachis hypogaea HOM05D001237 ORTHO05D009110 1.3e-68 264.2 294 54.8
arahy.Tifrunner.gnm1.ann1.YIEM7C Arachis hypogaea HOM05D001237 ORTHO05D009110 1.3e-68 264.2 294 54.8
QL12p001026 Quercus lobata HOM05D001237 ORTHO05D009110 4.3e-64 249.2 214 66.4
Glyma.09G212000 Glycine max HOM05D001237 ORTHO05D009110 1.4e-59 234.2 181 69.6
Hund11115 Selenicereus undatus HOM05D001237 ORTHO05D009110 6.7e-57 225.3 157 73.2
SEGI_12758 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 4.8e-55 219.2 135 75.6
RcHm_v2.0_Chr7g0213121 Rosa chinensis HOM05D001237 ORTHO05D009110 1.0e-52 211.5 236 51.7
Cre04.g212500 Chlamydomonas reinhardtii HOM05D001237 ORTHO05D009110 8.8e-49 198.4 274 43.4
PRCOL_00004822 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 5.0e-44 182.6 272 40.4
Lju2073A0T61 Lonicera japonica HOM05D001237 ORTHO05D009110 5.7e-40 169.1 112 75.0
MCO15G307 Micromonas commoda HOM05D001237 ORTHO05D009110 2.2e-39 167.2 280 36.1
HPP92_025933 Vanilla planifolia HOM05D001237 ORTHO05D009110 7.7e-37 158.7 119 68.9
Sopen09g023280 Solanum pennellii HOM05D001237 ORTHO05D009110 1.9e-35 154.1 98 74.5
Gohir.D08G172350 Gossypium hirsutum HOM05D001237 ORTHO05D009110 7.4e-32 142.1 79 81.0
FAN04G3094 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.6e-26 124.4 129 56.6
SalBow1G6490 Salvia bowleyana HOM05D001237 ORTHO05D009110 2.1e-26 124.0 85 71.8
PRCOL_00006184 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 1.6e-21 107.8 273 30.0
MCO12G167 Micromonas commoda HOM05D001237 ORTHO05D009110 2.7e-21 107.1 279 28.3
SEGI_16157 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 1.0e-17 95.1 66 66.7
Gohir.D08G172400 Gossypium hirsutum HOM05D001237 ORTHO05D009110 1.8e-14 84.3 90 51.1
vmacro14221 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 6.8e-09 65.9 45 75.6
AUR62027000 Chenopodium quinoa HOM05D005969 ORTHO05D007407 4.1e-06 56.6 330 23.9
Haze_08097 Corylus avellana HOM05D001237 ORTHO05D009110 7.0e-06 55.8 88 40.9


User provided reference genes

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