Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010788 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 5.6e-29 130.2 63 100.0
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.1e-21 105.9 57 86.0
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-18 95.9 55 78.2
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-18 93.6 55 76.4
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 5.9e-18 93.6 55 76.4
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 5.9e-18 93.6 55 76.4
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-18 93.6 55 76.4
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 1.0e-17 92.8 57 70.2
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-17 92.4 55 74.5
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-17 92.4 55 74.5
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 2.2e-17 91.7 55 74.5
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 2.2e-17 91.7 54 75.9
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 2.2e-17 91.7 55 74.5
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-17 91.3 55 74.5
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 2.9e-17 91.3 55 74.5
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 5.0e-17 90.5 56 69.6
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-17 90.5 55 72.7
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-17 90.5 55 72.7
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.5e-17 90.1 55 70.9
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-17 90.1 55 74.5
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-17 89.7 55 72.7
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 8.5e-17 89.7 55 72.7
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-17 89.7 55 70.9
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-16 89.4 54 74.1
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-16 89.0 55 72.7
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-16 88.6 55 69.1
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-16 88.6 56 69.6
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.2e-16 87.4 55 69.1
SHI43061 Sapria himalayana HOM05D000002 ORTHO05D004433 4.2e-16 87.4 53 73.6
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-16 87.0 54 72.2
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.2e-16 86.7 55 67.3
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 7.2e-16 86.7 55 70.9
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 7.2e-16 86.7 55 70.9
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-16 86.3 53 73.6
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 1.2e-15 85.9 55 67.3
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-15 85.5 43 93.0
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-15 85.1 56 66.1
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-15 85.1 56 66.1
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-15 84.7 55 65.5
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-15 84.3 55 61.8
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-15 84.3 55 67.3
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-15 84.3 53 71.7
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 7.9e-15 83.2 60 61.7
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 7.9e-15 83.2 55 65.5
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-14 82.4 55 60.0
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-14 82.4 53 67.9
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-14 82.4 55 65.5
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-14 81.3 55 58.2
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-14 80.9 55 58.2
SHI03641 Sapria himalayana HOM05D000002 ORTHO05D004433 3.9e-14 80.9 53 67.9
ECA233G2319 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-14 79.7 53 64.2
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-13 79.3 54 68.5
SHI18394 Sapria himalayana HOM05D000002 ORTHO05D004433 5.7e-13 77.0 53 64.2
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-13 76.6 55 60.0
Oeu034487.1 Olea europaea HOM05D000002 ORTHO05D004433 2.8e-12 74.7 54 59.3
SHI07420 Sapria himalayana HOM05D000002 ORTHO05D004433 2.8e-12 74.7 56 55.4
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.8e-12 74.7 54 59.3
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-12 73.9 41 80.5
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 6.3e-12 73.6 54 55.6
SHI37107 Sapria himalayana HOM05D000002 ORTHO05D004433 3.1e-11 71.2 45 71.1
SHI09918 Sapria himalayana HOM05D000002 ORTHO05D004433 5.3e-11 70.5 51 62.7
Sopen12g018110 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-10 68.2 53 56.6
PGSC0003DMG400001585 Solanum tuberosum HOM05D000002 ORTHO05D004433 2.6e-10 68.2 53 56.6
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.4e-10 67.8 53 52.8
CSS0036927 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 7.7e-10 66.6 53 62.3
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 6.5e-09 63.5 53 50.9
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-09 63.2 34 82.4
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.1e-08 62.8 51 56.9
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.4e-08 62.4 53 49.1
SHI08990 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-08 62.4 48 54.2
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 2.5e-08 61.6 54 50.0
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 4.2e-08 60.8 45 62.2
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 4.2e-08 60.8 34 79.4
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.5e-08 60.5 53 47.2
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 5.5e-08 60.5 35 77.1
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 9.4e-08 59.7 54 50.0
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-07 58.5 39 66.7
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-07 58.5 39 59.0
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.6e-07 57.8 56 41.1
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 4.6e-07 57.4 53 39.6
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 7.9e-07 56.6 54 33.3
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 7.9e-07 56.6 50 48.0
SHI32312 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 55.8 33 75.8
SHI29049 Sapria himalayana HOM05D000002 ORTHO05D004433 3.9e-06 54.3 56 42.9
Thhalv10019725m.g Eutrema salsugineum HOM05D000002 ORTHO05D004433 8.8e-06 53.1 52 46.2


User provided reference genes

Program Settings