Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010777 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 4.7e-67 257.7 125 100.0
CSS0035336 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 1.1e-47 193.4 94 98.9
Actinidia19805 Actinidia chinensis HOM05D002553 ORTHO05D002767 2.0e-38 162.5 94 83.0
vmacro19643 Vaccinium macrocarpon HOM05D002553 ORTHO05D002767 7.2e-36 154.1 94 77.7
Rhsim05G0144400 Rhododendron simsii HOM05D002553 ORTHO05D002767 5.2e-34 147.9 111 67.6
CiPaw.07G014700 Carya illinoinensis HOM05D002553 ORTHO05D002767 1.3e-32 143.3 94 73.4
Cfa006549 Carpinus fangiana HOM05D002553 ORTHO05D002767 1.7e-32 142.9 96 71.9
Dinv40259 Davidia involucrata HOM05D002553 ORTHO05D002767 2.8e-32 142.1 94 72.3
Manes.09G163850 Manihot esculenta HOM05D002553 ORTHO05D002767 1.4e-31 139.8 93 69.9
Prupe.6G330100 Prunus persica HOM05D002553 ORTHO05D002767 3.1e-31 138.7 110 62.7
Haze_04234 Corylus avellana HOM05D002553 ORTHO05D002767 1.2e-30 136.7 93 72.0
Ciclev10003913m.g Citrus clementina HOM05D002553 ORTHO05D002767 2.3e-29 132.5 93 68.8
MD04G1209100 Malus domestica HOM05D002553 ORTHO05D002767 3.8e-29 131.7 107 61.7
Atru.chr2.474 Acer truncatum HOM05D002553 ORTHO05D002767 1.1e-28 130.2 92 70.7
Hma1.2p1_0666F.1_g199460 Hydrangea macrophylla HOM05D002553 ORTHO05D002767 1.1e-28 130.2 94 69.1
Oeu057684.1 Olea europaea HOM05D002553 ORTHO05D002767 1.1e-28 130.2 103 64.1
Lj7C475G4 Lonicera japonica HOM05D002553 ORTHO05D002767 1.9e-28 129.4 98 63.3
GSVIVG01000009001 Vitis vinifera HOM05D002553 ORTHO05D002767 1.9e-28 129.4 92 65.2
TAR633G1107 Trochodendron aralioides HOM05D002553 ORTHO05D002767 2.5e-28 129.0 98 64.3
Duzib177G0165 Durio zibethinus HOM05D002553 ORTHO05D002767 3.3e-28 128.6 93 65.6
TWI56G0412 Tripterygium wilfordii HOM05D002553 ORTHO05D002767 3.3e-28 128.6 94 64.9
COL.COLO4_13516 Corchorus olitorius HOM05D002553 ORTHO05D002767 1.2e-27 126.7 93 63.4
Potri.005G039000 Populus trichocarpa HOM05D002553 ORTHO05D002767 1.2e-27 126.7 88 69.3
QL03p004484 Quercus lobata HOM05D002553 ORTHO05D002767 4.7e-27 124.8 96 66.7
Sabra05G0037600 Salix brachista HOM05D002553 ORTHO05D002767 4.7e-27 124.8 94 64.9
Gohir.D08G229300 Gossypium hirsutum HOM05D002553 ORTHO05D002767 1.8e-26 122.9 93 66.7
Gorai.004G243500 Gossypium raimondii HOM05D002553 ORTHO05D002767 1.8e-26 122.9 93 66.7
THA.LOC104818678 Tarenaya hassleriana HOM05D002553 ORTHO05D002767 1.8e-26 122.9 87 64.4
RcHm_v2.0_Chr3g0454111 Rosa chinensis HOM05D002553 ORTHO05D002767 2.3e-26 122.5 107 57.0
Lj1g0019778 Lotus japonicus HOM05D002553 ORTHO05D002767 3.0e-26 122.1 93 65.6
CANSAT25G3036 Cannabis sativa HOM05D002553 ORTHO05D002767 4.0e-26 121.7 108 57.4
VMungo0540G2049 Vigna mungo HOM05D002553 ORTHO05D002767 4.0e-26 121.7 93 65.6
Phvul.006G093933 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 5.2e-26 121.3 101 61.4
FAN02G2444 Fragaria x ananassa HOM05D002553 ORTHO05D002767 6.8e-26 120.9 107 57.0
FAN05G4192 Fragaria x ananassa HOM05D002553 ORTHO05D002767 6.8e-26 120.9 107 56.1
FAN14G0929 Fragaria x ananassa HOM05D002553 ORTHO05D002767 6.8e-26 120.9 107 56.1
Cpa.g.sc48.13 Carica papaya HOM05D002553 ORTHO05D002767 8.9e-26 120.6 87 64.4
Phvul.006G093922 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 1.5e-25 119.8 93 65.6
DCAR_029434 Daucus carota HOM05D002553 ORTHO05D002767 2.0e-25 119.4 95 64.2
FAN05G5165 Fragaria x ananassa HOM05D002553 ORTHO05D002767 3.4e-25 118.6 107 54.2
TPR.G33193 Trifolium pratense HOM05D002553 ORTHO05D002767 3.4e-25 118.6 88 64.8
Cc02_g32700 Coffea canephora HOM05D002553 ORTHO05D002767 4.4e-25 118.2 93 62.4
MBI17_g29610_MAGBIO Magnolia biondii HOM05D002553 ORTHO05D002767 7.5e-25 117.5 87 60.9
Ca_09373_v3 Cicer arietinum L. HOM05D002553 ORTHO05D002767 9.8e-25 117.1 88 63.6
Aa31LG11G9180 Aethionema arabicum HOM05D002553 ORTHO05D002767 1.7e-24 116.3 87 63.2
FvH4_6g05341 Fragaria vesca HOM05D002553 ORTHO05D002767 1.7e-24 116.3 107 55.1
Lalb_Chr15g0077101 Lupinus albus HOM05D002553 ORTHO05D002767 1.7e-24 116.3 88 65.9
Aqoxy1G02454 Aquilegia oxysepala HOM05D002553 ORTHO05D002767 2.2e-24 115.9 87 60.9
AL6G39610 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 2.9e-24 115.5 87 64.4
Migut.M00920 Erythranthe guttata HOM05D002553 ORTHO05D002767 3.7e-24 115.2 94 61.7
Sopen10g005180 Solanum pennellii HOM05D002553 ORTHO05D002767 3.7e-24 115.2 102 57.8
Thhalv10003627m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 6.4e-24 114.4 88 64.8
AT5G27400 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 8.3e-24 114.0 87 63.2
AT5G27410 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 8.3e-24 114.0 87 63.2
Carub.0006s2514 Capsella rubella HOM05D002553 ORTHO05D002767 1.9e-23 112.8 87 63.2
PGR031G3980 Punica granatum HOM05D002553 ORTHO05D002767 2.4e-23 112.5 93 62.4
BcaNung04367 Brassica carinata HOM05D002553 ORTHO05D002767 3.2e-23 112.1 88 64.8
PSO832G1112 Papaver somniferum HOM05D002553 ORTHO05D002767 5.4e-23 111.3 87 59.8
arahy.Tifrunner.gnm1.ann1.NG2XET Arachis hypogaea HOM05D002553 ORTHO05D002767 7.0e-23 110.9 88 64.8
arahy.Tifrunner.gnm1.ann1.Y4B2Z0 Arachis hypogaea HOM05D002553 ORTHO05D002767 7.0e-23 110.9 88 64.8
Glyma.19G237200 Glycine max HOM05D002553 ORTHO05D002767 7.0e-23 110.9 93 62.4
Medtr7g113850 Medicago truncatula HOM05D002553 ORTHO05D002767 7.0e-23 110.9 88 61.4
Solyc10g009400.3 Solanum lycopersicum HOM05D002553 ORTHO05D002767 7.0e-23 110.9 102 56.9
Lsat_1_v5_gn_2_67941 Lactuca sativa HOM05D002553 ORTHO05D002767 9.2e-23 110.5 97 56.7
BcaNung02464 Brassica carinata HOM05D002553 ORTHO05D002767 1.2e-22 110.2 88 63.6
AUR62005108 Chenopodium quinoa HOM05D002553 ORTHO05D002767 1.2e-22 110.2 97 58.8
ClCG02G016020 Citrullus lanatus HOM05D002553 ORTHO05D002767 1.6e-22 109.8 116 55.2
Psat3g010200 Pisum sativum HOM05D002553 ORTHO05D002767 1.6e-22 109.8 93 58.1
Sp2g20630 Schrenkiella parvula HOM05D002553 ORTHO05D002767 1.6e-22 109.8 88 62.5
ECA238G2267 Erigeron canadensis HOM05D002553 ORTHO05D002767 2.0e-22 109.4 94 58.5
MSTRG.16234 Avicennia marina HOM05D002553 ORTHO05D002767 2.7e-22 109.0 94 60.6
AUR62000868 Chenopodium quinoa HOM05D002553 ORTHO05D002767 2.7e-22 109.0 97 60.8
PSO210G0829 Papaver somniferum HOM05D002553 ORTHO05D002767 2.7e-22 109.0 87 58.6
CARHR186000 Cardamine hirsuta HOM05D002553 ORTHO05D002767 3.5e-22 108.6 88 61.4
Nitab4.5_0000176g0030 Nicotiana tabacum HOM05D002553 ORTHO05D002767 4.6e-22 108.2 102 55.9
HanXRQChr14g0445961 Helianthus annuus HOM05D002553 ORTHO05D002767 6.0e-22 107.8 94 58.5
Hund07046 Selenicereus undatus HOM05D002553 ORTHO05D002767 7.8e-22 107.5 97 57.7
SGA_v2.0_scaffold1G00162 Striga asiatica HOM05D002553 ORTHO05D002767 1.0e-21 107.1 95 60.0
Thecc.05G308100 Theobroma cacao HOM05D002553 ORTHO05D002767 1.0e-21 107.1 87 62.1
Nitab4.5_0001510g0020 Nicotiana tabacum HOM05D002553 ORTHO05D002767 1.7e-21 106.3 102 54.9
Sc09g0003350 Simmondsia chinensis HOM05D002553 ORTHO05D002767 1.7e-21 106.3 97 57.7
C07p40730 Brassica napus HOM05D002553 ORTHO05D002767 5.0e-21 104.8 89 62.9
BolC7t44601H Brassica oleracea HOM05D002553 ORTHO05D002767 5.0e-21 104.8 89 62.9
Peaxi162Scf01441g00005 Petunia axillaris HOM05D002553 ORTHO05D002767 5.0e-21 104.8 112 53.6
ATR0626G345 Amborella trichopoda HOM05D002553 ORTHO05D002767 8.6e-21 104.0 87 59.8
A06p37580 Brassica napus HOM05D002553 ORTHO05D002767 4.7e-19 98.2 90 60.0
BraA06t26677Z Brassica rapa HOM05D002553 ORTHO05D002767 4.7e-19 98.2 90 60.0
CDE08G1662 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 8.3e-16 87.4 87 51.7
SalBow8G2918 Salvia bowleyana HOM05D002553 ORTHO05D002767 8.3e-16 87.4 94 51.1
Gohir.A08G212300 Gossypium hirsutum HOM05D002553 ORTHO05D002767 9.2e-15 84.0 56 71.4
Nn1g02088 Nelumbo nucifera HOM05D002553 ORTHO05D002767 1.7e-13 79.7 58 63.8
EL10Ac4g09309 Beta vulgaris HOM05D002553 ORTHO05D002767 3.6e-11 72.0 70 55.7
HPP92_017205 Vanilla planifolia HOM05D002553 ORTHO05D002767 9.9e-09 63.9 100 44.0
Zm00001eb417780 Zea mays HOM05D002553 ORTHO05D002767 2.1e-06 56.2 87 43.7
Mapoly0153s0022 Marchantia polymorpha HOM05D002553 ORTHO05D002767 3.5e-06 55.5 103 34.0
CAN.G271.7 Capsicum annuum HOM05D002553 ORTHO05D002767 6.0e-06 54.7 43 60.5


User provided reference genes

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