Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 2.4e-142 508.8 261 100.0
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 1.2e-141 506.5 261 99.6
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 3.1e-105 385.6 255 79.2
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 1.0e-100 370.5 250 76.4
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 5.6e-99 364.8 248 76.2
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 5.8e-96 354.8 247 74.1
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 7.1e-94 347.8 248 71.4
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 9.3e-94 347.4 249 71.5
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 1.6e-93 346.7 245 71.4
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 2.3e-92 342.8 243 70.4
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 3.9e-92 342.0 246 68.7
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 1.1e-91 340.5 252 71.8
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 1.5e-91 340.1 243 70.4
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 3.3e-91 339.0 234 73.5
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 4.3e-91 338.6 243 71.6
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 9.6e-91 337.4 249 69.1
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 1.3e-90 337.0 237 71.7
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 4.8e-90 335.1 250 67.6
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 6.3e-90 334.7 240 71.7
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 8.2e-90 334.3 247 68.4
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 1.4e-89 333.6 236 72.0
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 1.8e-89 333.2 249 67.9
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 2.4e-89 332.8 246 69.5
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 3.1e-89 332.4 249 67.9
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 3.1e-89 332.4 251 69.3
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 6.9e-89 331.3 248 66.5
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 6.9e-89 331.3 245 69.4
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 9.0e-89 330.9 249 67.5
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 1.2e-88 330.5 242 69.8
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 2.0e-88 329.7 247 67.6
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 5.9e-88 328.2 250 66.8
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 7.6e-88 327.8 254 66.5
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 2.2e-87 326.2 230 72.2
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 5.0e-87 325.1 240 70.0
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 5.0e-87 325.1 243 69.5
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 6.5e-87 324.7 234 67.9
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 1.1e-86 323.9 243 69.1
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 1.1e-86 323.9 251 67.7
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 1.4e-86 323.6 243 68.7
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 3.2e-86 322.4 243 68.7
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 2.1e-85 319.7 234 66.7
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 2.1e-85 319.7 274 62.4
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 6.1e-85 318.2 241 66.0
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 6.1e-85 318.2 241 66.0
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 6.1e-85 318.2 206 76.2
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 6.1e-85 318.2 231 70.1
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 7.9e-85 317.8 228 70.6
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 1.3e-84 317.0 232 67.7
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 5.1e-84 315.1 235 68.9
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 8.7e-84 314.3 235 68.5
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 1.5e-83 313.5 232 69.4
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 1.9e-83 313.2 250 64.8
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 3.3e-83 312.4 236 68.2
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 5.7e-83 311.6 225 69.3
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 7.4e-83 311.2 236 65.7
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 9.7e-83 310.8 236 65.3
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 1.3e-82 310.5 230 66.5
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 1.3e-82 310.5 233 68.7
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 2.2e-82 309.7 248 64.1
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 2.2e-82 309.7 241 63.5
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 2.8e-82 309.3 249 61.0
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 2.8e-82 309.3 225 69.3
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 2.8e-82 309.3 250 65.2
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 3.7e-82 308.9 241 66.0
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 4.8e-82 308.5 243 61.7
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 4.8e-82 308.5 241 66.0
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 6.3e-82 308.1 231 64.1
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 6.3e-82 308.1 234 65.0
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 8.2e-82 307.8 237 65.4
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 8.2e-82 307.8 234 63.7
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 1.1e-81 307.4 243 64.2
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 1.1e-81 307.4 250 62.4
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 1.4e-81 307.0 243 63.8
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 1.4e-81 307.0 233 68.2
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 3.1e-81 305.8 247 64.4
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 6.9e-81 304.7 252 61.5
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 6.9e-81 304.7 234 64.5
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 9.0e-81 304.3 234 64.5
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 1.5e-80 303.5 243 64.6
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 2.6e-80 302.8 248 60.1
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 2.6e-80 302.8 248 60.1
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 4.5e-80 302.0 241 65.1
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 7.7e-80 301.2 223 64.6
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 1.0e-79 300.8 243 61.7
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 1.7e-79 300.1 225 67.1
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 6.5e-79 298.1 235 66.4
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 2.7e-77 292.7 390 45.1
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 8.8e-76 287.7 233 62.7
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 3.3e-75 285.8 250 58.8
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 7.4e-75 284.6 224 62.9
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 1.3e-74 283.9 201 70.6
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 3.7e-74 282.3 247 59.9
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 3.1e-73 279.3 218 62.4
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 2.0e-72 276.6 250 60.0
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 3.4e-72 275.8 246 58.9
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 1.4e-68 263.8 256 58.2
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 1.2e-61 240.7 191 61.8
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 6.3e-58 228.4 199 59.3
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 2.4e-57 226.5 242 50.4
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 3.5e-56 222.6 218 52.3
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 5.9e-56 221.9 226 51.3
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 2.9e-55 219.5 190 60.0
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 5.4e-49 198.7 137 73.7
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 5.2e-44 182.2 248 42.7
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 6.8e-44 181.8 141 63.8
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 9.5e-38 161.4 110 72.7
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 2.0e-35 153.7 98 75.5
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 4.3e-30 136.0 121 56.2
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 1.7e-26 124.0 85 72.9
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 3.4e-19 99.8 234 32.9
Cre06.g262000 Chlamydomonas reinhardtii HOM05D001530 ORTHO05D003676 3.3e-06 56.6 189 25.4


User provided reference genes

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