Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.3e-31 139.0 66 100.0
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 5.9e-29 130.2 62 98.4
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 1.9e-27 125.2 64 87.5
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 4.2e-27 124.0 64 87.5
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 4.2e-27 124.0 64 87.5
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 5.5e-27 123.6 64 84.4
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 9.4e-27 122.9 64 85.9
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 1.2e-26 122.5 64 84.4
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 1.2e-26 122.5 63 88.9
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 1.6e-26 122.1 64 84.4
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.6e-26 122.1 64 87.5
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 2.7e-26 121.3 64 82.8
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 3.6e-26 120.9 64 82.8
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 3.6e-26 120.9 64 84.4
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 4.7e-26 120.6 64 84.4
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 4.7e-26 120.6 64 84.4
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 4.7e-26 120.6 64 81.2
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 4.7e-26 120.6 64 81.2
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 4.7e-26 120.6 64 81.2
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 6.1e-26 120.2 63 84.1
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 6.1e-26 120.2 63 87.3
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 6.1e-26 120.2 64 85.9
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 6.1e-26 120.2 64 85.9
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 8.0e-26 119.8 64 79.7
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.0e-25 119.4 64 79.7
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.0e-25 119.4 63 87.3
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 1.8e-25 118.6 64 79.7
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 2.3e-25 118.2 65 78.5
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 2.3e-25 118.2 64 84.4
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 3.0e-25 117.9 65 76.9
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 3.0e-25 117.9 64 81.2
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 4.0e-25 117.5 62 85.5
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 5.2e-25 117.1 64 78.1
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.2e-25 117.1 64 78.1
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 6.8e-25 116.7 64 76.6
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 6.8e-25 116.7 64 76.6
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 6.8e-25 116.7 63 84.1
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 6.8e-25 116.7 64 78.1
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 6.8e-25 116.7 64 79.7
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 8.8e-25 116.3 63 84.1
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 1.2e-24 115.9 64 82.8
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 1.5e-24 115.5 65 78.5
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 2.0e-24 115.2 62 83.9
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 2.0e-24 115.2 64 79.7
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 2.0e-24 115.2 64 76.6
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 2.6e-24 114.8 64 76.6
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.6e-24 114.8 64 81.2
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.6e-24 114.8 64 81.2
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 3.4e-24 114.4 64 79.7
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 3.4e-24 114.4 66 81.8
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 3.4e-24 114.4 64 75.0
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 3.4e-24 114.4 64 79.7
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 4.4e-24 114.0 63 77.8
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 4.4e-24 114.0 64 79.7
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 4.4e-24 114.0 62 80.6
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 5.7e-24 113.6 64 78.1
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 5.7e-24 113.6 64 73.4
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 7.5e-24 113.2 64 78.1
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 7.5e-24 113.2 63 76.2
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 9.8e-24 112.8 63 79.4
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 9.8e-24 112.8 63 79.4
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 9.8e-24 112.8 63 76.2
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 1.7e-23 112.1 63 77.8
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 1.7e-23 112.1 63 77.8
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 1.7e-23 112.1 63 77.8
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.7e-23 112.1 63 77.8
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 1.7e-23 112.1 63 77.8
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.7e-23 112.1 63 79.4
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 1.7e-23 112.1 64 75.0
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 2.2e-23 111.7 58 86.2
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 2.2e-23 111.7 64 73.4
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 2.2e-23 111.7 63 77.8
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 2.8e-23 111.3 63 76.2
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 2.8e-23 111.3 62 77.4
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 3.7e-23 110.9 64 75.0
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 3.7e-23 110.9 62 79.0
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 3.7e-23 110.9 65 75.4
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 6.3e-23 110.2 63 76.2
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 6.3e-23 110.2 65 80.0
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 6.3e-23 110.2 66 77.3
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 6.3e-23 110.2 64 73.4
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 8.3e-23 109.8 63 74.6
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 8.3e-23 109.8 61 78.7
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.1e-22 109.4 62 77.4
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 1.1e-22 109.4 64 71.9
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 1.4e-22 109.0 63 76.2
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 1.4e-22 109.0 63 76.2
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 1.4e-22 109.0 64 71.9
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 1.8e-22 108.6 64 73.4
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 1.8e-22 108.6 62 79.0
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.4e-22 108.2 64 76.6
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 2.4e-22 108.2 67 74.6
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 4.1e-22 107.5 64 68.8
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 4.1e-22 107.5 64 68.8
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 5.4e-22 107.1 64 73.4
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 7.0e-22 106.7 61 77.0
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 7.0e-22 106.7 66 77.3
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 1.2e-21 105.9 63 74.6
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 3.5e-21 104.4 62 74.2
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 7.7e-21 103.2 64 73.4
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 1.7e-20 102.1 61 72.1
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 3.8e-20 100.9 66 72.7
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 3.8e-20 100.9 66 72.7
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 2.8e-18 94.7 66 59.1
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 3.0e-17 91.3 62 64.5
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 9.2e-14 79.7 64 51.6
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 4.5e-13 77.4 64 48.4
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 7.8e-13 76.6 64 48.4
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 1.2e-10 69.3 62 48.4
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 4.4e-08 60.8 32 75.0


User provided reference genes

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