Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010640 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 7.4e-206 720.3 363 100.0
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.0e-174 615.9 326 96.9
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 2.2e-154 549.3 342 83.0
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 1.1e-129 467.2 347 68.9
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 2.5e-129 466.1 342 72.2
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 2.5e-129 466.1 342 71.6
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 1.2e-126 457.2 342 70.2
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 1.5e-126 456.8 342 69.0
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 2.0e-126 456.4 425 61.4
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 2.9e-125 452.6 342 67.8
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 4.9e-125 451.8 341 69.5
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 3.9e-122 442.2 341 67.4
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 1.9e-121 439.9 341 66.6
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 1.2e-120 437.2 373 63.8
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 2.1e-120 436.4 342 64.6
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 3.6e-120 435.6 341 67.2
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 1.4e-119 433.7 342 67.8
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 2.6e-118 429.5 347 63.7
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 3.4e-118 429.1 341 66.0
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 1.7e-117 426.8 343 65.9
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 3.7e-117 425.6 342 64.6
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 8.3e-117 424.5 342 67.0
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 1.9e-116 423.3 343 66.8
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 2.4e-116 422.9 346 64.7
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 1.2e-115 420.6 342 65.8
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 1.2e-115 420.6 341 64.5
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 3.5e-115 419.1 341 63.9
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 4.6e-115 418.7 342 64.3
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 6.0e-115 418.3 347 61.4
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 1.0e-114 417.5 342 64.3
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 2.3e-114 416.4 343 65.9
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 2.3e-114 416.4 343 65.9
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 3.0e-114 416.0 342 65.2
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 1.5e-113 413.7 343 65.3
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 4.3e-113 412.1 346 64.7
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 7.3e-113 411.4 306 69.6
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 9.5e-113 411.0 343 64.7
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 9.5e-113 411.0 341 65.1
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 1.1e-111 407.5 342 65.5
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.1e-111 407.5 342 64.6
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 1.4e-111 407.1 342 63.7
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 1.8e-111 406.8 341 63.9
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 4.0e-111 405.6 342 61.4
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 6.8e-111 404.8 341 63.3
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 1.5e-110 403.7 342 62.6
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 2.0e-110 403.3 342 62.3
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 4.4e-110 402.1 347 60.2
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 1.3e-109 400.6 342 64.0
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 3.8e-109 399.1 340 62.1
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 4.9e-109 398.7 342 63.5
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 8.4e-109 397.9 343 60.6
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 2.4e-108 396.4 342 62.6
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 3.2e-108 396.0 342 62.0
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 9.2e-108 394.4 342 61.4
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 2.3e-106 389.8 342 62.0
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 3.0e-106 389.4 342 62.3
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 3.9e-106 389.0 342 61.1
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 9.0e-103 377.9 360 59.4
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 1.5e-102 377.1 342 59.1
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 7.6e-102 374.8 345 59.4
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 9.9e-102 374.4 342 59.6
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 1.7e-98 363.6 341 57.2
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 6.6e-98 361.7 345 57.7
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 3.1e-95 352.8 304 62.8
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 2.0e-94 350.1 345 57.4
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 2.0e-94 350.1 345 57.4
Cpa.g.sc73.58 Carica papaya HOM05D004910 ORTHO05D006864 4.9e-93 345.5 299 61.5
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 1.4e-92 344.0 358 54.5
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 4.8e-88 328.9 343 52.5
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 3.1e-87 326.2 342 53.8
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 3.1e-87 326.2 351 51.6
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 2.0e-86 323.6 340 53.8
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 3.4e-86 322.8 346 52.3
AUR62038026 Chenopodium quinoa HOM05D004910 ORTHO05D006864 2.9e-85 319.7 344 50.3
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 2.4e-84 316.6 352 51.4
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 1.3e-82 310.8 344 49.7
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 1.3e-82 310.8 351 53.3
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 1.5e-81 307.4 342 50.6
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 4.3e-81 305.8 346 47.7
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 1.4e-79 300.8 336 51.8
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 1.8e-79 300.4 341 50.4
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 1.5e-78 297.4 342 47.4
Sc26g0002020 Simmondsia chinensis HOM05D004910 ORTHO05D006864 5.8e-78 295.4 323 52.0
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 7.6e-78 295.0 344 48.0
Psat4g216280 Pisum sativum HOM05D004910 ORTHO05D006864 7.1e-76 288.5 257 59.5
SEGI_03249 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 2.5e-73 280.0 287 53.0
AUR62014509 Chenopodium quinoa HOM05D004910 ORTHO05D006864 2.5e-68 263.5 343 45.2
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 2.5e-68 263.5 175 71.4
SMO347G0286 Selaginella moellendorffii HOM05D004910 ORTHO05D006864 3.9e-66 256.1 357 42.0
Hma1.2p1_0353F.1_g133240 Hydrangea macrophylla HOM05D004910 ORTHO05D006864 4.3e-65 252.7 150 84.0
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 1.2e-43 181.4 192 55.2
Actinidia21201 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.4e-42 177.9 123 74.0
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 3.0e-42 176.8 428 33.2
Psat6g100000 Pisum sativum HOM05D004910 ORTHO05D030483 1.7e-32 144.4 217 42.4
Actinidia31737 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.9e-28 131.0 90 78.9
RcHm_v2.0_Chr4g0408121 Rosa chinensis HOM05D004910 ORTHO05D006864 2.4e-23 114.0 85 68.2
RcHm_v2.0_Chr4g0407941 Rosa chinensis HOM05D004910 ORTHO05D019205 1.0e-18 98.6 65 72.3
Psat0s999g0120 Pisum sativum HOM05D004910 ORTHO05D030483 2.3e-18 97.4 147 40.1
AagrBONN_evm.TU.Sc2ySwM_117.2552 Anthoceros agrestis HOM05D004910 ORTHO05D006864 6.8e-18 95.9 74 62.2
Cpa.g.sc73.59 Carica papaya HOM05D004910 ORTHO05D006864 1.9e-12 77.8 42 85.7
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 4.3e-12 76.6 42 85.7
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 7.3e-12 75.9 45 80.0
FAN03G1104 Fragaria x ananassa HOM05D004910 ORTHO05D019205 1.8e-10 71.2 54 63.0
Actinidia21202 Actinidia chinensis HOM05D004910 ORTHO05D030909 4.0e-10 70.1 49 79.6
Gohir.D06G038650 Gossypium hirsutum HOM05D004910 ORTHO05D030909 4.0e-10 70.1 55 61.8
Psat7g121640 Pisum sativum HOM05D004910 ORTHO05D030483 3.7e-08 63.5 103 35.9
Gohir.D06G038000 Gossypium hirsutum HOM05D004910 ORTHO05D030909 1.6e-06 58.2 43 67.4


User provided reference genes

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