Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010622 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D113255 3.8e-102 374.8 180 100.0
CSS0038144 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D109152 2.9e-17 92.8 181 42.5
Dinv23522 Davidia involucrata HOM05D001555 ORTHO05D001616 2.4e-08 63.2 118 36.4
vmacro02109 Vaccinium macrocarpon HOM05D001555 ORTHO05D001616 3.5e-07 59.3 48 54.2
Actinidia00523 Actinidia chinensis HOM05D001555 ORTHO05D001616 7.8e-07 58.2 49 57.1
Rhsim11G0176900 Rhododendron simsii HOM05D001555 ORTHO05D001616 1.0e-06 57.8 48 52.1
Potri.009G115800 Populus trichocarpa HOM05D001555 ORTHO05D001616 1.3e-06 57.4 47 55.3
Manes.17G100900 Manihot esculenta HOM05D001555 ORTHO05D001616 2.3e-06 56.6 48 52.1
Peaxi162Scf00417g01211 Petunia axillaris HOM05D001555 ORTHO05D001616 2.3e-06 56.6 48 56.2
Hma1.2p1_0066F.1_g036430 Hydrangea macrophylla HOM05D001555 ORTHO05D001616 3.9e-06 55.8 107 31.8
RcHm_v2.0_Chr6g0301001 Rosa chinensis HOM05D001555 ORTHO05D001616 3.9e-06 55.8 47 53.2
Sabra09G0088900 Salix brachista HOM05D001555 ORTHO05D001616 3.9e-06 55.8 47 53.2
Atru.chr5.3013 Acer truncatum HOM05D001555 ORTHO05D001616 5.0e-06 55.5 47 51.1
TAR381G1049 Trochodendron aralioides HOM05D001555 ORTHO05D001616 5.0e-06 55.5 47 55.3
FvH4_2g39840 Fragaria vesca HOM05D001555 ORTHO05D001616 8.6e-06 54.7 47 51.1


User provided reference genes

Program Settings