Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 2.1e-197 692.2 353 100.0
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 8.9e-148 527.3 353 75.6
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 7.8e-144 514.2 354 75.1
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 2.9e-138 495.7 351 73.8
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 3.7e-138 495.4 413 64.4
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 2.4e-129 466.1 349 69.6
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 4.9e-122 441.8 352 67.6
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 1.1e-118 430.6 348 63.8
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 2.8e-117 426.0 350 63.1
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 4.8e-117 425.2 356 64.3
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 3.4e-115 419.1 359 64.1
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 6.4e-114 414.8 348 62.6
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 6.7e-111 404.8 411 54.3
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 8.7e-111 404.4 348 62.6
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 1.5e-110 403.7 345 61.7
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 1.6e-109 400.2 354 61.9
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 1.8e-108 396.7 341 60.1
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 3.1e-108 396.0 356 59.0
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 6.9e-108 394.8 347 60.8
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.2e-107 394.0 353 58.9
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.6e-107 392.9 353 58.6
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 3.4e-107 392.5 353 58.6
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 9.9e-107 391.0 353 58.6
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 8.4e-106 387.9 347 59.1
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 1.2e-104 384.0 364 58.5
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 1.6e-104 383.6 355 58.3
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 2.7e-104 382.9 353 58.6
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 4.6e-104 382.1 362 56.4
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 6.0e-104 381.7 357 58.5
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 8.7e-103 377.9 357 56.0
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 1.5e-102 377.1 356 58.1
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.5e-102 376.3 353 57.5
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.6e-102 375.2 353 57.2
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 9.6e-102 374.4 358 57.8
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 1.3e-101 374.0 350 58.6
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 1.3e-101 374.0 337 60.8
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 3.7e-101 372.5 356 57.6
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 4.8e-101 372.1 354 59.3
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 8.2e-101 371.3 349 58.2
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 3.1e-100 369.4 324 61.1
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 6.9e-100 368.2 359 55.4
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 4.5e-99 365.5 362 55.0
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 5.8e-99 365.2 355 54.1
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 7.6e-99 364.8 358 53.6
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 7.6e-99 364.8 332 58.7
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 1.3e-98 364.0 358 53.6
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.3e-98 364.0 348 56.9
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 3.8e-98 362.5 336 58.0
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 8.4e-98 361.3 355 54.4
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 2.1e-96 356.7 345 53.9
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 6.0e-96 355.1 360 53.6
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 1.0e-95 354.4 374 53.7
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 1.3e-95 354.0 361 53.5
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 3.0e-95 352.8 351 57.5
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 2.5e-94 349.7 336 53.3
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 7.4e-94 348.2 282 62.4
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 7.4e-94 348.2 359 51.8
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 3.7e-93 345.9 352 52.8
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 1.4e-92 344.0 289 59.5
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 1.4e-92 344.0 285 60.7
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 2.4e-92 343.2 353 53.8
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 1.2e-91 340.9 365 52.3
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 1.5e-91 340.5 365 51.2
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 2.9e-90 336.3 283 59.7
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 3.8e-90 335.9 242 74.8
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 5.0e-90 335.5 285 60.0
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 5.0e-90 335.5 436 47.7
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 9.3e-89 331.3 253 70.8
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 1.8e-87 327.0 358 51.1
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 4.3e-86 322.4 251 64.9
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 2.4e-84 316.6 350 50.3
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 4.1e-84 315.8 367 50.4
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 1.5e-83 313.9 284 57.4
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 1.0e-82 311.2 365 51.0
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 1.4e-81 307.4 281 56.2
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 3.6e-80 302.8 302 54.0
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 6.1e-80 302.0 281 55.5
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 1.0e-79 301.2 364 51.1
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 3.3e-78 296.2 366 47.0
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 2.2e-77 293.5 299 52.5
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 4.1e-76 289.3 347 47.6
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 4.1e-76 289.3 417 43.9
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 3.4e-75 286.2 330 51.2
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.1e-73 281.2 349 45.8
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 3.2e-73 279.6 201 67.2
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 5.5e-73 278.9 349 46.1
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 6.1e-72 275.4 348 48.0
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 5.2e-71 272.3 257 60.7
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 1.7e-69 267.3 256 59.4
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.4e-63 247.7 372 43.3
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 4.4e-62 242.7 559 34.2
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 1.4e-60 237.7 264 51.1
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.2e-59 234.6 167 70.7
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 1.5e-54 217.6 249 50.2
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 5.4e-52 209.1 343 39.1
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 3.5e-43 179.9 301 36.2
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 8.6e-42 175.3 177 51.4
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 8.6e-42 175.3 346 35.3
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 1.3e-37 161.4 103 70.9
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 4.6e-35 152.9 159 46.5
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 1.4e-31 141.4 356 30.6
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 6.0e-27 125.9 227 38.8
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 6.0e-19 99.4 116 48.3
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 7.3e-17 92.4 135 41.5
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 2.1e-16 90.9 382 26.2
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 2.1e-16 90.9 110 47.3
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 3.6e-16 90.1 163 30.1
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 2.2e-13 80.9 233 24.9
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 2.2e-13 80.9 46 76.1
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 7.1e-12 75.9 115 41.7
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 2.7e-11 73.9 61 57.4
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 6.6e-10 69.3 37 81.1
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 9.6e-09 65.5 139 35.3
Os11g0565400 Oryza sativa ssp. japonica HOM05D006946 ORTHO05D008634 2.1e-08 64.3 45 66.7
HPP92_022101 Vanilla planifolia HOM05D006946 ORTHO05D008634 6.2e-08 62.8 46 60.9
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 1.4e-07 61.6 313 23.3
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 2.4e-07 60.8 90 42.2
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 4.0e-07 60.1 76 43.4
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 5.2e-07 59.7 114 29.8
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 1.2e-06 58.5 122 32.0
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 2.0e-06 57.8 109 31.2
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 4.4e-06 56.6 116 28.4
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 5.8e-06 56.2 116 31.9
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 5.8e-06 56.2 114 30.7
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 5.8e-06 56.2 109 29.4


User provided reference genes

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