Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010561 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 2.9e-201 704.9 329 100.0
CSS0012204 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 5.7e-149 531.2 380 73.4
CSS0024213 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 3.7e-148 528.5 380 73.2
CSS0012002 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 1.4e-118 430.3 356 64.9
CSS0027353 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 4.8e-95 352.1 361 51.5
Actinidia10958 Actinidia chinensis HOM05D013255 ORTHO05D011422 1.5e-24 117.9 234 31.2
FvH4_4g30830 Fragaria vesca HOM05D010144 ORTHO05D011422 1.3e-20 104.8 367 29.2
Prupe.5G157900 Prunus persica HOM05D013255 ORTHO05D011422 1.7e-20 104.4 320 29.7
FvH4_4g30880 Fragaria vesca HOM05D010144 ORTHO05D011422 3.4e-16 90.1 311 28.6
DCAR_025514 Daucus carota HOM05D013255 ORTHO05D011422 8.3e-15 85.5 296 31.1
FAN17G0220 Fragaria x ananassa HOM05D010144 ORTHO05D011422 4.1e-14 83.2 315 26.3
MD15G1041200 Malus domestica HOM05D013255 ORTHO05D011422 7.0e-14 82.4 329 28.0
RcHm_v2.0_Chr2g0136121 Rosa chinensis HOM05D017060 ORTHO05D012234 2.3e-12 77.4 217 32.7
Lj5P564T10 Lonicera japonica HOM05D012292 ORTHO05D012234 1.1e-11 75.1 277 26.7
CSS0005823 Camellia sinensis var. sinensis HOM05D015193 ORTHO05D005682 3.3e-11 73.6 164 34.1
Lj5E258T0 Lonicera japonica HOM05D012292 ORTHO05D012234 3.3e-11 73.6 212 28.8
Rhsim11G0054100 Rhododendron simsii HOM05D015811 ORTHO05D014676 1.5e-08 64.7 180 30.6
MD15G1401000 Malus domestica HOM05D013255 ORTHO05D011422 1.3e-07 61.6 222 25.7
Lj5C264T6 Lonicera japonica HOM05D012292 ORTHO05D012234 3.7e-07 60.1 310 22.6
Lj5P260T19 Lonicera japonica HOM05D012292 ORTHO05D012234 4.1e-06 56.6 295 24.7


User provided reference genes

Program Settings