Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010539 Camellia sinensis var. sinensis HOM05D001809 ORTHO05D001802 0.0e+00 1501.1 767 100.0
Actinidia23269 Actinidia chinensis HOM05D001809 ORTHO05D001802 3.0e-172 609.8 751 51.4
Dinv39323 Davidia involucrata HOM05D001809 ORTHO05D001802 3.3e-163 579.7 754 49.1
CSS0013749 Camellia sinensis var. sinensis HOM05D001809 ORTHO05D001802 9.9e-144 515.0 765 46.9
Rhsim06G0048700 Rhododendron simsii HOM05D001809 ORTHO05D001802 7.9e-133 478.8 728 46.2
vmacro21530 Vaccinium macrocarpon HOM05D001809 ORTHO05D001802 9.0e-129 465.3 743 44.3
Dinv35968 Davidia involucrata HOM05D001809 ORTHO05D001802 5.8e-128 462.6 718 43.0
Hma1.2p1_0982F.1_g243940 Hydrangea macrophylla HOM05D001809 ORTHO05D001802 8.2e-98 362.5 736 39.9
Atru.chr13.657_Atru.chr13.658 Acer truncatum HOM05D001809 ORTHO05D001802 2.7e-88 330.9 735 37.0
TAR381G0046 Trochodendron aralioides HOM05D001809 ORTHO05D001802 6.1e-85 319.7 903 31.2
QL02p005255 Quercus lobata HOM05D001809 ORTHO05D001802 1.4e-84 318.5 760 35.1
Potri.014G031000 Populus trichocarpa HOM05D001809 ORTHO05D001802 1.4e-76 292.0 748 34.0
Manes.18G035700 Manihot esculenta HOM05D001809 ORTHO05D001802 3.0e-76 290.8 749 33.2
Thecc.08G010200 Theobroma cacao HOM05D001809 ORTHO05D001802 1.3e-74 285.4 817 31.5
Sabra14G0022000 Salix brachista HOM05D001809 ORTHO05D001802 3.1e-73 280.8 777 32.7
Haze_17533 Corylus avellana HOM05D001809 ORTHO05D001802 4.1e-73 280.4 829 33.5
RcHm_v2.0_Chr6g0307781 Rosa chinensis HOM05D001809 ORTHO05D001802 4.1e-73 280.4 757 33.0
Haze_17536 Corylus avellana HOM05D001809 ORTHO05D001802 3.5e-72 277.3 829 33.5
Lj4A54T45 Lonicera japonica HOM05D001809 ORTHO05D001802 1.1e-70 272.3 720 33.3
Ciclev10000118m.g Citrus clementina HOM05D001809 ORTHO05D001802 1.9e-70 271.6 752 33.1
Duzib116G0555 Durio zibethinus HOM05D001809 ORTHO05D001802 3.3e-70 270.8 858 31.2
RcHm_v2.0_Chr6g0307611 Rosa chinensis HOM05D001809 ORTHO05D001802 4.3e-70 270.4 757 32.5
COL.COLO4_26484 Corchorus olitorius HOM05D001809 ORTHO05D001802 2.0e-67 261.5 813 31.6
FAN15G0729 Fragaria x ananassa HOM05D001809 ORTHO05D001802 6.4e-66 256.5 762 32.2
Prupe.1G437400 Prunus persica HOM05D001809 ORTHO05D001802 6.4e-66 256.5 748 32.1
FvH4_2g34540 Fragaria vesca HOM05D001809 ORTHO05D001802 1.8e-65 255.0 754 31.7
FAN20G2363 Fragaria x ananassa HOM05D001809 ORTHO05D001802 1.8e-65 255.0 758 32.1
FAN27G2534 Fragaria x ananassa HOM05D001809 ORTHO05D001802 3.0e-63 247.7 757 31.6
TWI36G0281 Tripterygium wilfordii HOM05D001809 ORTHO05D001802 6.6e-63 246.5 748 31.6
CiPaw.15G060900 Carya illinoinensis HOM05D001809 ORTHO05D001802 8.6e-63 246.1 747 32.3
Gohir.D05G205000 Gossypium hirsutum HOM05D001809 ORTHO05D001802 6.2e-61 240.0 754 30.6
Gorai.009G211300 Gossypium raimondii HOM05D001809 ORTHO05D001802 8.0e-61 239.6 754 30.5
MD15G1084000 Malus domestica HOM05D001809 ORTHO05D001802 1.8e-60 238.4 728 32.0
Gohir.D06G015600 Gossypium hirsutum HOM05D001809 ORTHO05D001802 3.4e-59 234.2 834 29.1
Manes.05G172500 Manihot esculenta HOM05D001809 ORTHO05D001802 1.2e-56 225.7 965 27.4
GSVIVG01009515001 Vitis vinifera HOM05D001809 ORTHO05D001802 1.6e-56 225.3 601 32.3
Gorai.010G018400 Gossypium raimondii HOM05D001809 ORTHO05D001802 2.0e-56 224.9 827 29.5
Gohir.A06G017500 Gossypium hirsutum HOM05D001809 ORTHO05D001802 1.1e-54 219.2 836 28.7
MD15G1030100 Malus domestica HOM05D001809 ORTHO05D001802 1.1e-54 219.2 751 31.3
DCAR_008790 Daucus carota HOM05D001809 ORTHO05D001802 2.1e-45 188.3 734 27.5
Lj4C774T6 Lonicera japonica HOM05D001809 ORTHO05D001802 2.1e-45 188.3 748 30.2
Eucgr.F00236 Eucalyptus grandis HOM05D001809 ORTHO05D001802 6.2e-45 186.8 821 26.7
CAN.G371.29 Capsicum annuum HOM05D001809 ORTHO05D001802 5.8e-43 180.3 727 27.6
MELO3C010877.2 Cucumis melo HOM05D001809 ORTHO05D001802 1.1e-41 176.0 740 28.5
CsaV3_2G027980 Cucumis sativus L. HOM05D001809 ORTHO05D001802 5.4e-41 173.7 740 27.4
Manes.05G172400 Manihot esculenta HOM05D001809 ORTHO05D001802 7.1e-41 173.3 584 30.1
Peaxi162Scf00252g01217 Petunia axillaris HOM05D001809 ORTHO05D001802 4.6e-40 170.6 756 29.2
Sopen04g032710 Solanum pennellii HOM05D001809 ORTHO05D001802 4.3e-38 164.1 732 27.6
Solyc04g079100.3 Solanum lycopersicum HOM05D001809 ORTHO05D001802 9.6e-38 162.9 722 27.6
ClCG08G015780 Citrullus lanatus HOM05D001809 ORTHO05D001802 1.2e-37 162.5 763 27.1
PGSC0003DMG401008019 Solanum tuberosum HOM05D001809 ORTHO05D001802 2.1e-37 161.8 731 26.7
Nitab4.5_0000686g0080 Nicotiana tabacum HOM05D001809 ORTHO05D001802 3.8e-34 151.0 718 26.7
Nn5g30247 Nelumbo nucifera HOM05D001809 ORTHO05D001802 6.4e-34 150.2 798 25.4
Gohir.A05G201900 Gossypium hirsutum HOM05D001809 ORTHO05D001802 1.9e-33 148.7 525 30.3
Nitab4.5_0001101g0060 Nicotiana tabacum HOM05D001809 ORTHO05D001802 4.2e-33 147.5 715 26.7
Aqoxy6G01351 Aquilegia oxysepala HOM05D001809 ORTHO05D001802 3.5e-32 144.4 826 25.8
DCAR_012770 Daucus carota HOM05D001809 ORTHO05D001802 1.9e-30 138.7 773 24.3
Sc02g0007070 Simmondsia chinensis HOM05D001809 ORTHO05D001802 1.9e-30 138.7 824 26.2
MSTRG.25097 Avicennia marina HOM05D001809 ORTHO05D001802 1.6e-29 135.6 777 25.1
Gohir.D02G091800 Gossypium hirsutum HOM05D001809 ORTHO05D001802 1.1e-28 132.9 809 24.6
Gorai.005G103000 Gossypium raimondii HOM05D001809 ORTHO05D001802 5.3e-28 130.6 812 24.6
Sed0004513 Sechium edule HOM05D001809 ORTHO05D001802 5.3e-28 130.6 797 24.5
Gohir.A03G077200 Gossypium hirsutum HOM05D001809 ORTHO05D001802 9.3e-25 119.8 814 24.9
CANSAT11G1610 Cannabis sativa HOM05D001809 ORTHO05D001802 1.0e-23 116.3 760 25.4
MSTRG.1341 Avicennia marina HOM05D001809 ORTHO05D001802 2.3e-23 115.2 731 25.6
Cpa.g.sc49.6 Carica papaya HOM05D001809 ORTHO05D001802 6.7e-23 113.6 236 33.1
Glyma.04G038200 Glycine max HOM05D001809 ORTHO05D001802 1.1e-20 106.3 747 27.3
PSO541G5455 Papaver somniferum HOM05D001809 ORTHO05D001802 5.3e-20 104.0 722 24.0
PGR083G0900 Punica granatum HOM05D001809 ORTHO05D001802 1.3e-18 99.4 784 25.0
Gohir.A05G201850 Gossypium hirsutum HOM05D001809 ORTHO05D001802 2.4e-17 95.1 110 48.2
SalBow7G1470 Salvia bowleyana HOM05D001809 ORTHO05D001802 3.2e-17 94.7 570 26.8
Lalb_Chr23g0267151 Lupinus albus HOM05D001809 ORTHO05D001802 1.0e-15 89.7 326 33.4
Lj1g0025902 Lotus japonicus HOM05D001809 ORTHO05D001802 5.1e-15 87.4 697 26.8
Phvul.009G064400 Phaseolus vulgaris HOM05D001809 ORTHO05D001802 6.7e-15 87.0 724 26.4
EL10Ac1g01728 Beta vulgaris HOM05D001809 ORTHO05D001802 8.7e-15 86.7 293 28.3
Actinidia22621 Actinidia chinensis HOM05D001809 ORTHO05D001802 1.1e-14 86.3 102 54.9
Ah.11g043300 Amaranthus hybridus HOM05D001809 ORTHO05D001802 9.6e-14 83.2 193 30.6
QL09p045403 Quercus lobata HOM05D000125 ORTHO05D010101 9.6e-14 83.2 102 49.0
MBI02_g02962_MAGBIO Magnolia biondii HOM05D001809 ORTHO05D001802 1.6e-13 82.4 526 23.8
Oeu044837.2 Olea europaea HOM05D001809 ORTHO05D001802 2.8e-13 81.6 696 24.0
ECA232G3129 Erigeron canadensis HOM05D001809 ORTHO05D001802 4.8e-13 80.9 711 24.6
AUR62042171 Chenopodium quinoa HOM05D001809 ORTHO05D001802 1.8e-12 79.0 122 40.2
AUR62022413 Chenopodium quinoa HOM05D001809 ORTHO05D001802 2.4e-12 78.6 123 40.7
Hund17573 Selenicereus undatus HOM05D001809 ORTHO05D001802 5.3e-12 77.4 103 41.7
SHI08235 Sapria himalayana HOM05D001809 ORTHO05D000001 4.5e-11 74.3 241 27.4
Migut.C00590 Erythranthe guttata HOM05D001809 ORTHO05D001802 1.0e-10 73.2 99 44.4
ATR0100G035 Amborella trichopoda HOM05D001809 ORTHO05D001802 1.3e-10 72.8 131 38.9
unitig_32.g11127 Utricularia gibba HOM05D001809 ORTHO05D001802 8.4e-10 70.1 101 44.6
Glyma.06G039200 Glycine max HOM05D001809 ORTHO05D001802 1.4e-09 69.3 246 31.7
Lalb_Chr14g0368751 Lupinus albus HOM05D001809 ORTHO05D001802 5.5e-09 67.4 95 38.9
Lalb_Chr22g0355161 Lupinus albus HOM05D001809 ORTHO05D001802 7.1e-09 67.0 95 40.0
HanXRQChr09g0267881 Helianthus annuus HOM05D001809 ORTHO05D001802 4.6e-08 64.3 97 41.2
Lsat_1_v5_gn_4_125541 Lactuca sativa HOM05D001809 ORTHO05D001802 2.3e-07 62.0 285 24.6
BcaC04g21965 Brassica carinata HOM05D001809 ORTHO05D001802 3.9e-07 61.2 232 31.0
TAR629G1396 Trochodendron aralioides HOM05D001809 ORTHO05D001802 3.9e-07 61.2 98 40.8
HPP92_027217 Vanilla planifolia HOM05D001809 ORTHO05D001802 3.9e-07 61.2 166 32.5
THA.LOC104822848 Tarenaya hassleriana HOM05D001809 ORTHO05D001802 8.7e-07 60.1 137 32.8
PSO170G6383 Papaver somniferum HOM05D001809 ORTHO05D001802 7.4e-06 57.0 71 49.3
Medtr3g101590 Medicago truncatula HOM05D001809 ORTHO05D001802 9.7e-06 56.6 346 26.6


User provided reference genes

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