Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010518 Camellia sinensis var. sinensis HOM05D007662 ORTHO05D009666 1.8e-31 138.7 70 100.0
Rhsim02G0233800 Rhododendron simsii HOM05D007662 ORTHO05D009666 4.7e-16 87.4 64 75.0
TAR623G1524 Trochodendron aralioides HOM05D007662 ORTHO05D009666 1.0e-15 86.3 64 70.3
Rhsim02G0233900 Rhododendron simsii HOM05D007662 ORTHO05D009666 1.8e-15 85.5 64 73.4
Lj1g0001682 Lotus japonicus HOM05D007662 ORTHO05D009666 2.0e-14 82.0 54 74.1
Nitab4.5_0000488g0050 Nicotiana tabacum HOM05D007662 ORTHO05D009666 2.6e-14 81.6 66 63.6
PGSC0003DMG400015999 Solanum tuberosum HOM05D007662 ORTHO05D009666 2.6e-14 81.6 59 69.5
Hma1.2p1_0972F.1_g242860 Hydrangea macrophylla HOM05D007662 ORTHO05D009666 4.4e-14 80.9 58 74.1
PSO384G2541 Papaver somniferum HOM05D007662 ORTHO05D009666 5.7e-14 80.5 68 63.2
Cc01_g01030 Coffea canephora HOM05D007662 ORTHO05D009666 7.4e-14 80.1 68 60.3
Nitab4.5_0007654g0010 Nicotiana tabacum HOM05D007662 ORTHO05D009666 7.4e-14 80.1 69 58.0
CANSAT54G1122 Cannabis sativa HOM05D007662 ORTHO05D009666 1.3e-13 79.3 66 63.6
Nn7g35960 Nelumbo nucifera HOM05D007662 ORTHO05D009666 1.7e-13 79.0 68 64.7
Sopen01g015220 Solanum pennellii HOM05D007662 ORTHO05D009666 1.7e-13 79.0 54 72.2
Cfa009623 Carpinus fangiana HOM05D007662 ORTHO05D009666 2.2e-13 78.6 67 64.2
Solyc01g020320.3 Solanum lycopersicum HOM05D007662 ORTHO05D009666 2.2e-13 78.6 54 72.2
Manes.15G104500 Manihot esculenta HOM05D007662 ORTHO05D009666 2.8e-13 78.2 68 60.3
Atru.chr3.2207 Acer truncatum HOM05D007662 ORTHO05D009666 3.7e-13 77.8 70 62.9
PGSC0003DMG400017905 Solanum tuberosum HOM05D007662 ORTHO05D009666 3.7e-13 77.8 58 69.0
Peaxi162Scf00336g00087 Petunia axillaris HOM05D007662 ORTHO05D009666 6.3e-13 77.0 56 67.9
Haze_22992 Corylus avellana HOM05D007662 ORTHO05D009666 8.2e-13 76.6 66 63.6
Migut.N02119 Erythranthe guttata HOM05D007662 ORTHO05D009666 1.4e-12 75.9 61 70.5
Sed0021510 Sechium edule HOM05D007662 ORTHO05D009666 1.4e-12 75.9 61 70.5
Cpa.g.sc119.89 Carica papaya HOM05D007662 ORTHO05D009666 2.4e-12 75.1 45 80.0
PGR119G1192 Punica granatum HOM05D007662 ORTHO05D009666 2.4e-12 75.1 63 63.5
HanXRQChr02g0056871 Helianthus annuus HOM05D007662 ORTHO05D009666 4.1e-12 74.3 61 65.6
SalBow6G4367 Salvia bowleyana HOM05D007662 ORTHO05D009666 5.3e-12 73.9 48 77.1
SalBow8G2777 Salvia bowleyana HOM05D007662 ORTHO05D009666 5.3e-12 73.9 48 77.1
Peaxi162Scf00451g00322 Petunia axillaris HOM05D007662 ORTHO05D009666 7.0e-12 73.6 49 77.6
Sabra01G0007400 Salix brachista HOM05D007662 ORTHO05D009666 9.1e-12 73.2 56 67.9
Potri.001G009501 Populus trichocarpa HOM05D007662 ORTHO05D009666 1.2e-11 72.8 56 69.6
Duzib168G0137 Durio zibethinus HOM05D007662 ORTHO05D009666 1.6e-11 72.4 63 60.3
Oeu002702.1 Olea europaea HOM05D007662 ORTHO05D009666 1.6e-11 72.4 43 86.0
Prupe.6G011500 Prunus persica HOM05D007662 ORTHO05D009666 1.6e-11 72.4 62 64.5
Carub.0003s3490 Capsella rubella HOM05D007662 ORTHO05D009666 2.0e-11 72.0 54 64.8
Phvul.008G106450 Phaseolus vulgaris HOM05D007662 ORTHO05D009666 2.0e-11 72.0 59 66.1
Psat3g140280 Pisum sativum HOM05D007662 ORTHO05D009666 2.0e-11 72.0 46 78.3
COL.COLO4_10450 Corchorus olitorius HOM05D007662 ORTHO05D009666 2.6e-11 71.6 64 60.9
GSVIVG01025388001 Vitis vinifera HOM05D007662 ORTHO05D009666 2.6e-11 71.6 52 75.0
arahy.Tifrunner.gnm1.ann1.MELV6S Arachis hypogaea HOM05D007662 ORTHO05D009666 3.5e-11 71.2 56 69.6
MD03G1011000 Malus domestica HOM05D007662 ORTHO05D009666 3.5e-11 71.2 54 64.8
CsaV3_4G023520 Cucumis sativus L. HOM05D007662 ORTHO05D009666 4.5e-11 70.9 66 62.1
Gohir.A08G012100 Gossypium hirsutum HOM05D007662 ORTHO05D009666 4.5e-11 70.9 62 61.3
Lsat_1_v5_gn_6_51400 Lactuca sativa HOM05D007662 ORTHO05D009666 4.5e-11 70.9 37 91.9
MBI13_g29646_MAGBIO Magnolia biondii HOM05D007662 ORTHO05D009666 4.5e-11 70.9 60 65.0
Thecc.09G214700 Theobroma cacao HOM05D007662 ORTHO05D009666 4.5e-11 70.9 63 60.3
AL3G53480 Arabidopsis lyrata HOM05D007662 ORTHO05D009666 5.9e-11 70.5 49 67.3
Glyma.07G131900 Glycine max HOM05D007662 ORTHO05D009666 5.9e-11 70.5 36 91.7
Glyma.18G180600 Glycine max HOM05D007662 ORTHO05D009666 5.9e-11 70.5 50 68.0
ClCG02G023850 Citrullus lanatus HOM05D007662 ORTHO05D009666 7.7e-11 70.1 66 60.6
FAN11G0548 Fragaria x ananassa HOM05D007662 ORTHO05D009666 7.7e-11 70.1 60 63.3
FAN21G0034 Fragaria x ananassa HOM05D007662 ORTHO05D009666 7.7e-11 70.1 60 63.3
FAN25G2111 Fragaria x ananassa HOM05D007662 ORTHO05D009666 7.7e-11 70.1 60 63.3
Gohir.D08G022600 Gossypium hirsutum HOM05D007662 ORTHO05D009666 7.7e-11 70.1 36 94.4
Gorai.004G017900 Gossypium raimondii HOM05D007662 ORTHO05D009666 7.7e-11 70.1 36 94.4
TWI32G0733 Tripterygium wilfordii HOM05D007662 ORTHO05D009666 7.7e-11 70.1 74 55.4
Prupe.2G113800 Prunus persica HOM05D007662 ORTHO05D009666 1.0e-10 69.7 65 60.0
Aa31LG8G17430 Aethionema arabicum HOM05D007662 ORTHO05D009666 1.3e-10 69.3 46 67.4
FAN16G0597 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.3e-10 69.3 60 63.3
Lalb_Chr03g0042221 Lupinus albus HOM05D007662 ORTHO05D009666 1.3e-10 69.3 42 81.0
Medtr4g095740 Medicago truncatula HOM05D007662 ORTHO05D009666 1.3e-10 69.3 54 66.7
RcHm_v2.0_Chr5g0081401 Rosa chinensis HOM05D007662 ORTHO05D009666 1.3e-10 69.3 60 65.0
arahy.Tifrunner.gnm1.ann1.0G84UH Arachis hypogaea HOM05D007662 ORTHO05D009666 2.2e-10 68.6 56 67.9
DCAR_024358 Daucus carota HOM05D007662 ORTHO05D009666 2.2e-10 68.6 70 61.4
Carub.0003s3492 Capsella rubella HOM05D007662 ORTHO05D009666 2.9e-10 68.2 43 76.7
Eucgr.B02616 Eucalyptus grandis HOM05D007662 ORTHO05D009666 2.9e-10 68.2 38 86.8
Eucgr.L03549 Eucalyptus grandis HOM05D007662 ORTHO05D009666 2.9e-10 68.2 38 86.8
CARHR111030 Cardamine hirsuta HOM05D007662 ORTHO05D009666 5.0e-10 67.4 48 66.7
CiPaw.12G007400 Carya illinoinensis HOM05D007662 ORTHO05D009666 5.0e-10 67.4 36 86.1
Manes.04G126551 Manihot esculenta HOM05D007662 ORTHO05D009666 8.5e-10 66.6 59 64.4
unitig_8.g3321 Utricularia gibba HOM05D007662 ORTHO05D009666 8.5e-10 66.6 39 79.5
Thhalv10002142m.g Eutrema salsugineum HOM05D007662 ORTHO05D009666 1.5e-09 65.9 38 81.6
AT2G20480 Arabidopsis thaliana HOM05D007662 ORTHO05D009666 1.9e-09 65.5 48 66.7
BcaB03g16842 Brassica carinata HOM05D007662 ORTHO05D009666 1.9e-09 65.5 57 63.2
Aqoxy1G00152 Aquilegia oxysepala HOM05D007662 ORTHO05D009666 3.2e-09 64.7 43 67.4
C08p42210 Brassica napus HOM05D007662 ORTHO05D009666 4.2e-09 64.3 56 64.3
BolC8t51780H Brassica oleracea HOM05D007662 ORTHO05D009666 4.2e-09 64.3 56 64.3
ATR0598G132 Amborella trichopoda HOM05D007662 ORTHO05D009666 1.2e-08 62.8 45 66.7
ECA233G5312 Erigeron canadensis HOM05D007662 ORTHO05D009666 1.6e-08 62.4 35 82.9
Sp3g33680 Schrenkiella parvula HOM05D007662 ORTHO05D009666 2.1e-08 62.0 38 78.9
BcaC06g36736 Brassica carinata HOM05D007662 ORTHO05D009666 2.7e-08 61.6 57 57.9
A07p00270 Brassica napus HOM05D007662 ORTHO05D009666 2.7e-08 61.6 41 73.2
C07p00560 Brassica napus HOM05D007662 ORTHO05D009666 2.7e-08 61.6 57 57.9
BolC7t40501H Brassica oleracea HOM05D007662 ORTHO05D009666 2.7e-08 61.6 57 57.9
BcaC07g41215 Brassica carinata HOM05D007662 ORTHO05D009666 3.6e-08 61.2 56 62.5
BraA07t27819Z Brassica rapa HOM05D007662 ORTHO05D009666 3.6e-08 61.2 35 85.7
A09p58880 Brassica napus HOM05D007662 ORTHO05D009666 4.7e-08 60.8 56 60.7
BraA09t41274Z Brassica rapa HOM05D007662 ORTHO05D009666 4.7e-08 60.8 56 60.7
BcaB08g34910 Brassica carinata HOM05D007662 ORTHO05D009666 6.1e-08 60.5 56 62.5
Os09g0446000 Oryza sativa ssp. japonica HOM05D007662 ORTHO05D009666 6.1e-08 60.5 35 77.1
Hund07566 Selenicereus undatus HOM05D007662 ORTHO05D009666 1.0e-07 59.7 49 67.3
HPP92_019156 Vanilla planifolia HOM05D007662 ORTHO05D009666 2.3e-07 58.5 36 75.0
SEGI_07868 Sequoiadendron giganteum HOM05D007662 ORTHO05D009666 2.0e-06 55.5 54 51.9
Zm00001eb314380 Zea mays HOM05D007662 ORTHO05D009666 4.4e-06 54.3 39 66.7
EL10Ac4g10342 Beta vulgaris HOM05D007662 ORTHO05D009666 9.7e-06 53.1 47 57.4


User provided reference genes

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