Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010517 Camellia sinensis var. sinensis HOM05D007577 ORTHO05D002366 1.0e-60 236.9 152 100.0
vmacro21310 Vaccinium macrocarpon HOM05D007577 ORTHO05D002366 5.0e-23 111.7 158 48.7
Sabra05G0120900 Salix brachista HOM05D007577 ORTHO05D002366 1.9e-22 109.8 143 47.6
Actinidia10365 Actinidia chinensis HOM05D007577 ORTHO05D002366 5.5e-22 108.2 152 48.0
Thecc.08G067500 Theobroma cacao HOM05D007577 ORTHO05D002366 7.2e-22 107.8 152 44.7
QL09p017111 Quercus lobata HOM05D007577 ORTHO05D002366 4.7e-21 105.1 147 46.9
Potri.005G158400 Populus trichocarpa HOM05D007577 ORTHO05D002366 1.8e-20 103.2 149 44.3
Manes.02G147100 Manihot esculenta HOM05D007577 ORTHO05D002366 3.0e-20 102.4 146 44.5
Manes.18G061400 Manihot esculenta HOM05D007577 ORTHO05D002366 8.3e-18 94.4 141 40.4
Prupe.1G527300 Prunus persica HOM05D007577 ORTHO05D002366 3.1e-17 92.4 181 40.3
Phvul.008G179400 Phaseolus vulgaris HOM05D007577 ORTHO05D002366 4.1e-17 92.0 163 41.7
Peaxi162Scf00281g00079 Petunia axillaris HOM05D007577 ORTHO05D002366 9.2e-17 90.9 156 43.6
Haze_22347 Corylus avellana HOM05D007577 ORTHO05D002366 1.2e-16 90.5 155 43.9
Rhsim06G0074200 Rhododendron simsii HOM05D004661 ORTHO05D005827 2.0e-16 89.7 167 40.1
Dinv44835 Davidia involucrata HOM05D007577 ORTHO05D002366 3.5e-16 89.0 96 54.2
FvH4_5g35850 Fragaria vesca HOM05D007577 ORTHO05D002366 3.5e-16 89.0 176 38.1
FAN18G2443 Fragaria x ananassa HOM05D007577 ORTHO05D002366 3.5e-16 89.0 176 38.1
TWI12G1315 Tripterygium wilfordii HOM05D007577 ORTHO05D002366 3.5e-16 89.0 146 42.5
CiPaw.07G168400 Carya illinoinensis HOM05D007577 ORTHO05D002366 4.5e-16 88.6 146 43.2
FAN08G0887 Fragaria x ananassa HOM05D007577 ORTHO05D002366 4.5e-16 88.6 176 37.5
Nitab4.5_0001507g0070 Nicotiana tabacum HOM05D007577 ORTHO05D002366 7.8e-16 87.8 158 40.5
Glyma.02G212100 Glycine max HOM05D007577 ORTHO05D002366 1.0e-15 87.4 163 39.3
MD08G1192700 Malus domestica HOM05D007577 ORTHO05D002366 1.3e-15 87.0 182 37.9
Duzib041G0196 Durio zibethinus HOM05D007577 ORTHO05D002366 1.7e-15 86.7 151 41.1
Nitab4.5_0006922g0010 Nicotiana tabacum HOM05D007577 ORTHO05D002366 1.7e-15 86.7 159 40.9
FAN04G3208 Fragaria x ananassa HOM05D007577 ORTHO05D002366 1.1e-14 84.0 177 35.6
Duzib093G2023 Durio zibethinus HOM05D007577 ORTHO05D002366 1.5e-14 83.6 144 39.6
Lsat_1_v5_gn_1_2280 Lactuca sativa HOM05D007577 ORTHO05D002366 1.9e-14 83.2 165 54.5
MD15G1381100 Malus domestica HOM05D007577 ORTHO05D002366 3.3e-14 82.4 178 37.6
Gohir.D05G224200 Gossypium hirsutum HOM05D007577 ORTHO05D002366 4.3e-14 82.0 148 37.8
Sc23g0000570 Simmondsia chinensis HOM05D007577 ORTHO05D002366 4.3e-14 82.0 157 38.2
CiPaw.08G053900 Carya illinoinensis HOM05D007577 ORTHO05D002366 5.6e-14 81.6 151 38.4
VMungo0647G2546 Vigna mungo HOM05D007577 ORTHO05D002366 5.6e-14 81.6 164 37.8
Gohir.A02G077300 Gossypium hirsutum HOM05D007577 ORTHO05D002366 7.3e-14 81.3 153 39.9
COL.COLO4_35193 Corchorus olitorius HOM05D007577 ORTHO05D002366 9.5e-14 80.9 172 36.6
Glyma.14G179800 Glycine max HOM05D007577 ORTHO05D002366 9.5e-14 80.9 162 38.9
TAR376G0287 Trochodendron aralioides HOM05D007577 ORTHO05D002366 1.2e-13 80.5 150 40.0
Gohir.A05G221500 Gossypium hirsutum HOM05D007577 ORTHO05D002366 1.6e-13 80.1 148 39.9
Gorai.009G231700 Gossypium raimondii HOM05D007577 ORTHO05D002366 1.6e-13 80.1 148 37.2
TAR625G1503 Trochodendron aralioides HOM05D007577 ORTHO05D002366 1.6e-13 80.1 148 36.5
Solyc04g076010.3 Solanum lycopersicum HOM05D007577 ORTHO05D002366 2.8e-13 79.3 167 38.3
PGR042G1402 Punica granatum HOM05D007577 ORTHO05D002366 6.1e-13 78.2 170 41.2
RcHm_v2.0_Chr7g0237581 Rosa chinensis HOM05D007577 ORTHO05D002366 8.0e-13 77.8 176 35.8
Atru.chr13.1051 Acer truncatum HOM05D007577 ORTHO05D002366 1.0e-12 77.4 160 48.8
Sed0013944 Sechium edule HOM05D007577 ORTHO05D002366 1.8e-12 76.6 142 43.0
MBI06_g18795_MAGBIO Magnolia biondii HOM05D007577 ORTHO05D002366 3.0e-12 75.9 145 37.2
Gorai.005G095300 Gossypium raimondii HOM05D007577 ORTHO05D002366 4.0e-12 75.5 154 40.3
Gohir.D02G084600 Gossypium hirsutum HOM05D007577 ORTHO05D002366 5.2e-12 75.1 154 41.6
Cpa.g.sc608.1 Carica papaya HOM05D007577 ORTHO05D002366 8.9e-12 74.3 182 33.5
Cc10_g15550 Coffea canephora HOM05D007577 ORTHO05D002366 1.2e-11 73.9 161 35.4
SalBow3G1297 Salvia bowleyana HOM05D007577 ORTHO05D002366 1.2e-11 73.9 152 37.5
ClCG08G011490 Citrullus lanatus HOM05D007577 ORTHO05D002366 1.5e-11 73.6 136 45.6
MSTRG.24626 Avicennia marina HOM05D007577 ORTHO05D002366 2.6e-11 72.8 146 37.7
PGR031G3996 Punica granatum HOM05D007577 ORTHO05D002366 3.4e-11 72.4 148 34.5
arahy.Tifrunner.gnm1.ann1.15IZES Arachis hypogaea HOM05D007577 ORTHO05D002366 4.4e-11 72.0 154 37.0
Sc26g0000220 Simmondsia chinensis HOM05D007577 ORTHO05D002366 9.8e-11 70.9 140 45.0
MELO3C011066.2 Cucumis melo HOM05D007577 ORTHO05D002366 2.2e-10 69.7 141 40.4
Sed0009750 Sechium edule HOM05D007577 ORTHO05D002366 2.2e-10 69.7 141 35.5
Lalb_Chr04g0253001 Lupinus albus HOM05D007577 ORTHO05D002366 2.9e-10 69.3 148 32.4
Hund27003 Selenicereus undatus HOM05D007577 ORTHO05D002366 3.7e-10 68.9 175 33.7
TPR.G20891 Trifolium pratense HOM05D007577 ORTHO05D002366 3.7e-10 68.9 162 34.0
Medtr5g065350 Medicago truncatula HOM05D007577 ORTHO05D002366 4.9e-10 68.6 151 34.4
Ciclev10002010m.g Citrus clementina HOM05D007577 ORTHO05D002366 1.1e-09 67.4 178 42.1
Eucgr.F00405 Eucalyptus grandis HOM05D007577 ORTHO05D002366 1.1e-09 67.4 158 33.5
Migut.N00361 Erythranthe guttata HOM05D007577 ORTHO05D002366 1.8e-09 66.6 143 32.9
Duzib116G0880 Durio zibethinus HOM05D007577 ORTHO05D002366 3.2e-09 65.9 139 37.4
CANSAT25G2895 Cannabis sativa HOM05D007577 ORTHO05D002366 9.2e-09 64.3 172 35.5
CsaV3_2G030080 Cucumis sativus L. HOM05D007577 ORTHO05D002366 2.0e-08 63.2 141 39.7
TWI56G0426 Tripterygium wilfordii HOM05D007577 ORTHO05D002366 2.0e-08 63.2 136 33.8
Lalb_Chr17g0344401 Lupinus albus HOM05D007577 ORTHO05D002366 2.7e-08 62.8 157 33.8
EL10Ac1g01102 Beta vulgaris HOM05D007577 ORTHO05D002366 4.6e-08 62.0 176 40.9
arahy.Tifrunner.gnm1.ann1.MEQI9D Arachis hypogaea HOM05D007577 ORTHO05D002366 1.7e-07 60.1 154 32.5
Nn1g05500 Nelumbo nucifera HOM05D007577 ORTHO05D002366 1.7e-07 60.1 84 41.7
TAR628G0666 Trochodendron aralioides HOM05D007577 ORTHO05D002366 1.7e-07 60.1 89 44.9
LjContig00408g0001347 Lotus japonicus HOM05D007577 ORTHO05D002366 2.3e-07 59.7 159 37.1
Oeu043942.1 Olea europaea HOM05D007577 ORTHO05D002366 2.3e-07 59.7 140 35.7
Lalb_Chr10g0102661 Lupinus albus HOM05D007577 ORTHO05D002366 3.0e-07 59.3 155 32.9
Nn5g29944 Nelumbo nucifera HOM05D007577 ORTHO05D002366 6.6e-07 58.2 87 40.2
Psat0s2495g0040 Pisum sativum HOM05D007577 ORTHO05D002366 8.6e-07 57.8 160 30.6
ECA247G1746 Erigeron canadensis HOM05D007577 ORTHO05D002366 2.5e-06 56.2 160 38.1
ATR0022G018 Amborella trichopoda HOM05D007577 ORTHO05D002366 5.6e-06 55.1 144 30.6
Aqoxy5G01332 Aquilegia oxysepala HOM05D007945 ORTHO05D010049 5.6e-06 55.1 31 67.7


User provided reference genes

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