Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010463 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 2.1e-123 445.7 216 100.0
CSS0017361 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 5.9e-102 374.4 181 100.0
Actinidia29398 Actinidia chinensis HOM05D007440 ORTHO05D009418 1.5e-81 306.6 182 79.1
Rhsim02G0174300 Rhododendron simsii HOM05D007440 ORTHO05D009418 1.8e-79 299.7 189 78.8
GSVIVG01036437001 Vitis vinifera HOM05D007440 ORTHO05D009418 9.2e-79 297.4 180 78.9
TAR381G0685 Trochodendron aralioides HOM05D007440 ORTHO05D009418 1.2e-78 297.0 183 75.4
Cfa008111 Carpinus fangiana HOM05D007440 ORTHO05D009418 2.7e-78 295.8 180 77.8
Dinv41796 Davidia involucrata HOM05D007440 ORTHO05D009418 1.0e-77 293.9 180 76.7
CiPaw.03G017000 Carya illinoinensis HOM05D007440 ORTHO05D009418 5.0e-77 291.6 179 76.5
Duzib177G0102 Durio zibethinus HOM05D007440 ORTHO05D009418 8.6e-77 290.8 180 76.7
Haze_13927 Corylus avellana HOM05D007440 ORTHO05D009418 1.5e-76 290.0 180 76.7
Lj9C701T14 Lonicera japonica HOM05D007440 ORTHO05D009418 5.6e-76 288.1 180 77.2
Thecc.08G172800 Theobroma cacao HOM05D007440 ORTHO05D009418 7.3e-76 287.7 182 75.8
QL09p004054 Quercus lobata HOM05D007440 ORTHO05D009418 6.1e-75 284.6 180 75.0
COL.COLO4_24615 Corchorus olitorius HOM05D007440 ORTHO05D009418 2.3e-74 282.7 182 73.6
Nn1g02997 Nelumbo nucifera HOM05D007440 ORTHO05D009418 3.0e-74 282.3 179 74.9
ClCG11G008830 Citrullus lanatus HOM05D007440 ORTHO05D009418 2.0e-73 279.6 181 71.8
CsaV3_2G033090 Cucumis sativus L. HOM05D007440 ORTHO05D009418 3.4e-73 278.9 181 72.9
RcHm_v2.0_Chr7g0224381 Rosa chinensis HOM05D007440 ORTHO05D009418 3.4e-73 278.9 180 71.7
PGR031G3126 Punica granatum HOM05D007440 ORTHO05D009418 4.4e-73 278.5 182 73.1
MELO3C008079.2 Cucumis melo HOM05D007440 ORTHO05D009418 1.7e-72 276.6 181 71.8
Cpa.g.sc21.56 Carica papaya HOM05D007440 ORTHO05D009418 2.2e-72 276.2 180 72.8
TWI23G1187 Tripterygium wilfordii HOM05D007440 ORTHO05D009418 2.9e-72 275.8 181 74.0
Hma1.2p1_0708F.1_g207100 Hydrangea macrophylla HOM05D007440 ORTHO05D009418 6.4e-72 274.6 180 71.1
Oeu061891.1 Olea europaea HOM05D007440 ORTHO05D009418 1.4e-71 273.5 185 71.4
Prupe.1G546900 Prunus persica HOM05D007440 ORTHO05D009418 1.8e-71 273.1 180 70.6
FAN18G0056 Fragaria x ananassa HOM05D007440 ORTHO05D009418 2.0e-70 269.6 180 68.9
CANSAT25G0816 Cannabis sativa HOM05D007440 ORTHO05D009418 1.0e-69 267.3 181 71.3
Lj3g0019924 Lotus japonicus HOM05D007440 ORTHO05D009418 1.0e-69 267.3 183 72.7
FvH4_5g32910 Fragaria vesca HOM05D007440 ORTHO05D009418 3.0e-69 265.8 180 68.3
Manes.18G121350 Manihot esculenta HOM05D007440 ORTHO05D009418 3.9e-69 265.4 181 71.3
Atru.chr12.1704 Acer truncatum HOM05D007440 ORTHO05D009418 5.0e-69 265.0 180 71.7
Gohir.D05G254100 Gossypium hirsutum HOM05D007440 ORTHO05D009418 6.6e-69 264.6 180 71.7
Gohir.A05G252301 Gossypium hirsutum HOM05D007440 ORTHO05D009418 1.1e-68 263.8 180 71.1
Gorai.009G265700 Gossypium raimondii HOM05D007440 ORTHO05D009418 1.1e-68 263.8 180 71.7
Potri.019G076200 Populus trichocarpa HOM05D007440 ORTHO05D009418 1.5e-68 263.5 184 69.6
Lsat_1_v5_gn_1_25281 Lactuca sativa HOM05D007440 ORTHO05D009418 1.9e-68 263.1 193 67.4
Sed0012539 Sechium edule HOM05D007440 ORTHO05D009418 2.5e-68 262.7 181 69.1
Sabra19G0086600 Salix brachista HOM05D007440 ORTHO05D009418 4.3e-68 261.9 183 70.5
Glyma.13G000800 Glycine max HOM05D007440 ORTHO05D009418 5.6e-68 261.5 184 71.2
Phvul.011G216600 Phaseolus vulgaris HOM05D007440 ORTHO05D009418 1.2e-67 260.4 180 70.6
Cc03_g16220 Coffea canephora HOM05D007440 ORTHO05D009418 2.1e-67 259.6 208 62.5
PGSC0003DMG401002240 Solanum tuberosum HOM05D007440 ORTHO05D009418 6.2e-67 258.1 181 67.4
Solyc12g017690.3 Solanum lycopersicum HOM05D007440 ORTHO05D009418 8.0e-67 257.7 182 67.6
Sopen12g008470 Solanum pennellii HOM05D007440 ORTHO05D009418 1.4e-66 256.9 184 66.3
SalBow6G1672 Salvia bowleyana HOM05D007440 ORTHO05D009418 1.8e-66 256.5 183 67.8
arahy.Tifrunner.gnm1.ann1.E07HZ8 Arachis hypogaea HOM05D007440 ORTHO05D009418 1.5e-65 253.4 180 68.9
arahy.Tifrunner.gnm1.ann1.YQ4984 Arachis hypogaea HOM05D007440 ORTHO05D009418 1.5e-65 253.4 180 68.9
MD15G1399400 Malus domestica HOM05D007440 ORTHO05D009418 1.5e-65 253.4 189 63.5
PSO170G3813 Papaver somniferum HOM05D007440 ORTHO05D009418 1.5e-65 253.4 180 65.6
TPR.G34135 Trifolium pratense HOM05D007440 ORTHO05D009418 9.8e-65 250.8 180 66.7
PSO782G5381 Papaver somniferum HOM05D007440 ORTHO05D009418 1.7e-64 250.0 184 63.6
Nitab4.5_0000219g0040 Nicotiana tabacum HOM05D007440 ORTHO05D009418 3.7e-64 248.8 182 65.4
Migut.N03008 Erythranthe guttata HOM05D007440 ORTHO05D009418 6.4e-64 248.1 177 67.2
CDE05G2917 Ceratophyllum demersum HOM05D007440 ORTHO05D009418 3.2e-63 245.7 178 66.3
Psat7g227720 Pisum sativum HOM05D007440 ORTHO05D009418 1.2e-62 243.8 174 67.8
vmacro11039 Vaccinium macrocarpon HOM05D007440 ORTHO05D009418 1.6e-62 243.4 189 67.2
Hund26630 Selenicereus undatus HOM05D007440 ORTHO05D009418 2.7e-62 242.7 183 66.7
Medtr4g031180 Medicago truncatula HOM05D007440 ORTHO05D009418 3.5e-62 242.3 176 64.2
Aqoxy6G00075 Aquilegia oxysepala HOM05D007440 ORTHO05D009418 1.3e-61 240.4 194 61.9
HanXRQChr02g0037061 Helianthus annuus HOM05D007440 ORTHO05D009418 3.0e-61 239.2 181 65.7
MBI03_g14514_MAGBIO Magnolia biondii HOM05D007440 ORTHO05D009418 4.3e-60 235.3 206 59.7
FAN04G2515 Fragaria x ananassa HOM05D007440 ORTHO05D009418 2.1e-59 233.0 176 63.1
THA.LOC104810378 Tarenaya hassleriana HOM05D007440 ORTHO05D009418 1.4e-58 230.3 182 61.5
Atru.chr13.2417 Acer truncatum HOM05D007440 ORTHO05D009418 1.2e-57 227.3 163 69.3
Aa31LG4G9050 Aethionema arabicum HOM05D007440 ORTHO05D009418 3.4e-57 225.7 181 62.4
SGA_v2.0_scaffold19G08914 Striga asiatica HOM05D007440 ORTHO05D009418 3.7e-56 222.2 237 50.6
ATR1089G110 Amborella trichopoda HOM05D007440 ORTHO05D009418 3.0e-53 212.6 180 58.9
Os10g0141900 Oryza sativa ssp. japonica HOM05D007440 ORTHO05D009418 5.6e-52 208.4 177 61.0
Ciclev10024582m.g Citrus clementina HOM05D007440 ORTHO05D009418 1.2e-51 207.2 180 60.0
HPP92_004660 Vanilla planifolia HOM05D007440 ORTHO05D009418 8.1e-51 204.5 180 62.2
Lalb_Chr17g0336871 Lupinus albus HOM05D007440 ORTHO05D009418 4.3e-44 182.2 186 54.8
RcHm_v2.0_Chr7g0230881 Rosa chinensis HOM05D007440 ORTHO05D009418 5.6e-44 181.8 110 70.0
Ca_12759_v3 Cicer arietinum L. HOM05D007440 ORTHO05D009418 4.7e-43 178.7 180 52.8
SMO347G0497 Selaginella moellendorffii HOM05D007440 ORTHO05D009418 2.2e-40 169.9 154 49.4
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 4.9e-40 168.7 107 72.0
Pp3c17_10270 Physcomitrium patens HOM05D007440 ORTHO05D009418 6.4e-40 168.3 179 45.8
ECA247G2087 Erigeron canadensis HOM05D007440 ORTHO05D009418 4.2e-39 165.6 113 65.5
Mapoly0046s0064 Marchantia polymorpha HOM05D007440 ORTHO05D009418 1.6e-38 163.7 184 46.2
CAN.G8.40 Capsicum annuum HOM05D007440 ORTHO05D009418 7.8e-38 161.4 111 64.0
Nitab4.5_0006566g0010 Nicotiana tabacum HOM05D007440 ORTHO05D009418 3.0e-37 159.5 111 64.0
Eucgr.H00023 Eucalyptus grandis HOM05D007440 ORTHO05D009418 6.6e-37 158.3 92 77.2
Pp3c9_24070 Physcomitrium patens HOM05D007440 ORTHO05D009418 1.8e-34 150.2 179 43.6
FAN08G1847 Fragaria x ananassa HOM05D007440 ORTHO05D009418 1.1e-31 141.0 85 71.8
Thecc.09G136000 Theobroma cacao HOM05D007440 ORTHO05D009418 2.4e-31 139.8 100 68.0
CBR_g29696 Chara braunii HOM05D007440 ORTHO05D009418 6.0e-30 135.2 181 42.0
Zm00001eb026400 Zea mays HOM05D007440 ORTHO05D009418 5.1e-29 132.1 92 66.3
Thecc.02G308000 Theobroma cacao HOM05D007440 ORTHO05D009418 7.4e-20 101.7 79 64.6
Peaxi162Scf00017g00002 Petunia axillaris HOM05D007440 ORTHO05D009418 1.8e-13 80.5 43 81.4
Lsat_1_v5_gn_7_9441 Lactuca sativa HOM05D007440 ORTHO05D009418 4.3e-12 75.9 56 60.7
Cre10.g451000 Chlamydomonas reinhardtii HOM05D007440 ORTHO05D009418 7.4e-12 75.1 181 31.5
MCO13G519 Micromonas commoda HOM05D007440 ORTHO05D009418 1.3e-11 74.3 151 29.1
AagrBONN_evm.TU.Sc2ySwM_362.1381 Anthoceros agrestis HOM05D007440 ORTHO05D009418 3.7e-11 72.8 54 53.7
PRCOL_00006364 Prasinoderma coloniale HOM05D007440 ORTHO05D009418 9.3e-07 58.2 202 26.2


User provided reference genes

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