Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.3e-283 977.2 473 100.0
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 7.0e-273 943.3 473 97.3
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 4.9e-218 761.1 476 77.1
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 1.5e-211 739.6 476 77.5
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.8e-210 734.9 475 76.0
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 5.1e-207 724.5 471 75.6
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.5e-206 723.0 475 75.2
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 6.9e-196 687.6 485 73.0
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 2.8e-181 639.0 475 69.3
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.9e-178 629.0 462 66.7
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.8e-178 628.6 462 66.5
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 2.1e-176 622.9 480 67.1
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 2.8e-173 612.5 479 66.0
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 3.4e-171 605.5 469 64.6
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 1.0e-170 604.0 483 64.0
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 1.9e-169 599.7 473 62.2
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 2.7e-168 595.9 467 65.7
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 8.8e-167 590.9 475 62.9
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 4.4e-166 588.6 476 62.4
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 5.7e-166 588.2 472 62.7
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 3.7e-165 585.5 472 60.6
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 1.1e-164 583.9 472 60.2
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 3.4e-163 578.9 461 62.3
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 2.9e-162 575.9 472 61.4
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 9.4e-161 570.9 476 60.3
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 6.7e-159 564.7 478 60.3
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 9.7e-158 560.8 471 60.5
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 3.1e-156 555.8 466 61.2
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 1.2e-155 553.9 467 60.6
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 2.6e-155 552.7 466 58.8
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 3.5e-155 552.4 475 60.4
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 7.7e-155 551.2 465 59.4
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.7e-154 550.1 465 59.8
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.8e-154 548.9 465 59.1
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 5.0e-154 548.5 470 60.6
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 1.1e-153 547.4 466 58.4
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 1.9e-153 546.6 465 59.8
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 9.4e-153 544.3 465 58.9
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 9.4e-153 544.3 479 59.5
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 2.1e-152 543.1 464 59.7
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 8.0e-152 541.2 465 58.7
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 2.3e-151 539.7 458 59.6
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 6.7e-151 538.1 466 58.4
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.0e-150 536.6 459 59.5
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 3.7e-149 532.3 466 59.0
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 4.1e-148 528.9 452 58.0
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 1.6e-147 526.9 464 58.4
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 4.5e-147 525.4 460 57.8
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 5.9e-147 525.0 466 57.5
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 2.2e-146 523.1 466 58.2
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 5.5e-145 518.5 465 57.2
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 6.1e-144 515.0 472 56.8
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 1.4e-143 513.8 489 57.1
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 3.0e-143 512.7 476 55.5
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 5.2e-143 511.9 469 56.7
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 1.5e-142 510.4 476 56.5
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 2.0e-142 510.0 480 57.7
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 3.4e-142 509.2 462 57.8
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 1.8e-140 503.4 477 57.0
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 1.8e-140 503.4 461 56.8
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 5.4e-140 501.9 477 56.4
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 5.4e-140 501.9 471 55.6
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 7.0e-140 501.5 477 56.4
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 2.7e-139 499.6 484 55.4
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 1.7e-138 496.9 482 55.6
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 1.1e-137 494.2 461 56.0
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 3.3e-137 492.7 430 59.1
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 2.8e-136 489.6 484 55.8
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 1.0e-135 487.6 482 54.1
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 4.4e-134 482.3 486 52.3
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.3e-133 480.7 449 55.0
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 6.6e-130 468.4 457 52.5
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 1.2e-128 464.2 475 52.6
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 7.5e-126 454.9 481 51.6
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 2.9e-125 453.0 326 69.9
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 2.0e-123 446.8 455 51.0
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 3.9e-122 442.6 470 51.3
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 4.7e-120 435.6 463 49.0
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 1.7e-117 427.2 425 53.4
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 5.4e-116 422.2 499 48.9
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 3.9e-114 416.0 459 48.8
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 4.3e-113 412.5 456 49.8
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 7.3e-113 411.8 458 48.7
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 2.9e-109 399.8 459 48.1
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 8.3e-109 398.3 455 46.2
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.5e-105 387.5 475 45.9
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 3.3e-105 386.3 460 47.4
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 5.6e-105 385.6 462 47.8
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 5.6e-105 385.6 462 47.8
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 1.6e-104 384.0 458 46.1
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 2.8e-104 383.3 455 46.8
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 6.8e-103 378.6 458 46.7
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 2.9e-101 373.2 461 47.1
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 2.9e-101 373.2 462 45.9
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 1.4e-100 370.9 326 61.7
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 1.6e-99 367.5 458 46.1
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 3.5e-99 366.3 462 45.0
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 6.9e-95 352.1 368 49.5
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 1.9e-92 344.0 285 63.9
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 3.9e-90 336.3 461 44.3
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 9.9e-86 321.6 328 55.5
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.8e-80 302.8 295 52.2
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 5.5e-76 289.3 502 34.3
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 5.0e-61 239.6 257 51.4
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 1.1e-57 228.4 394 36.0
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 4.3e-57 226.5 349 40.7
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 2.2e-56 224.2 530 31.9
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 2.8e-56 223.8 242 51.7
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 4.5e-46 189.9 150 61.3
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 4.4e-41 173.3 366 32.8
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 3.0e-34 150.6 198 44.4
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.7e-32 144.8 135 53.3
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.1e-31 142.1 101 64.4
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 1.4e-31 141.7 560 23.9
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 9.1e-31 139.0 121 57.0
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.2e-28 130.6 102 59.8
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 3.0e-26 124.0 87 72.4
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.2e-25 122.1 91 63.7
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 5.7e-25 119.8 84 72.6
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 1.4e-23 115.2 106 50.0
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.2e-22 112.1 167 37.1
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.1e-19 101.3 80 60.0
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 4.4e-17 93.6 253 30.8
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 4.9e-16 90.1 93 45.2
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 3.5e-14 84.0 143 41.3


User provided reference genes

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