Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010446 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D024703 4.2e-63 244.6 129 100.0
Dinv33435 Davidia involucrata HOM05D002027 ORTHO05D004229 1.8e-26 122.9 139 56.8
GSVIVG01032392001 Vitis vinifera HOM05D002027 ORTHO05D004229 1.8e-26 122.9 113 62.8
Lju41A42G102 Lonicera japonica HOM05D002027 ORTHO05D004229 8.6e-24 114.0 136 50.0
TAR374G0231 Trochodendron aralioides HOM05D002027 ORTHO05D004229 1.1e-23 113.6 120 55.0
Nitab4.5_0001860g0060 Nicotiana tabacum HOM05D002027 ORTHO05D004229 5.6e-23 111.3 113 55.8
Hma1.2p1_1747F.1_g300460 Hydrangea macrophylla HOM05D002027 ORTHO05D004229 9.5e-23 110.5 135 48.1
Hma1.2p1_2550F.1_g324240 Hydrangea macrophylla HOM05D002027 ORTHO05D004229 9.5e-23 110.5 135 48.1
Rhsim10G0016600 Rhododendron simsii HOM05D002027 ORTHO05D004229 8.0e-22 107.5 126 51.6
vmacro05869 Vaccinium macrocarpon HOM05D002027 ORTHO05D004229 1.4e-21 106.7 120 55.0
Sopen02g016990 Solanum pennellii HOM05D002027 ORTHO05D004229 1.8e-21 106.3 114 57.0
Migut.H00065 Erythranthe guttata HOM05D002027 ORTHO05D004229 2.3e-21 105.9 126 49.2
Nitab4.5_0002529g0060 Nicotiana tabacum HOM05D002027 ORTHO05D004229 6.8e-21 104.4 128 46.9
Rhsim10G0015500 Rhododendron simsii HOM05D002027 ORTHO05D004229 8.9e-21 104.0 125 50.4
CSS0038040 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D024703 1.2e-20 103.6 125 52.8
Cc07_g01580 Coffea canephora HOM05D002027 ORTHO05D004229 1.2e-20 103.6 116 52.6
Peaxi162Scf00080g01317 Petunia axillaris HOM05D002027 ORTHO05D004229 3.4e-20 102.1 124 49.2
CSS0032324 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D004229 7.5e-20 100.9 113 53.1
CAN.G1057.9 Capsicum annuum HOM05D002027 ORTHO05D004229 1.3e-19 100.1 118 51.7
Solyc02g067870.3 Solanum lycopersicum HOM05D002027 ORTHO05D004229 2.2e-19 99.4 113 54.0
PSO541G4480 Papaver somniferum HOM05D002027 ORTHO05D004229 7.0e-18 94.4 125 45.6
COL.COLO4_29156 Corchorus olitorius HOM05D002027 ORTHO05D004229 9.2e-18 94.0 118 52.5
Nitab4.5_0001550g0100 Nicotiana tabacum HOM05D002027 ORTHO05D004229 9.2e-18 94.0 127 47.2
Oeu018142.1 Olea europaea HOM05D002027 ORTHO05D004229 9.2e-18 94.0 116 54.3
PSO541G4249 Papaver somniferum HOM05D002027 ORTHO05D004229 3.5e-17 92.0 156 42.3
PSO754G0009 Papaver somniferum HOM05D002027 ORTHO05D004229 5.9e-17 91.3 161 42.2
DCAR_021726 Daucus carota HOM05D002027 ORTHO05D004229 5.0e-16 88.2 115 46.1
Manes.15G150400 Manihot esculenta HOM05D002027 ORTHO05D004229 8.6e-16 87.4 126 48.4
Nitab4.5_0003318g0090 Nicotiana tabacum HOM05D002027 ORTHO05D004229 1.9e-15 86.3 97 51.5
PSO111G0085 Papaver somniferum HOM05D002027 ORTHO05D004229 2.5e-15 85.9 160 40.6
Oeu054624.1 Olea europaea HOM05D002027 ORTHO05D004229 7.3e-15 84.3 113 49.6
Prupe.3G292900 Prunus persica HOM05D002027 ORTHO05D004229 2.8e-14 82.4 55 74.5
SGA_v2.0_scaffold18G08275 Striga asiatica HOM05D002027 ORTHO05D004229 2.8e-14 82.4 126 43.7
Ciclev10017779m.g Citrus clementina HOM05D002027 ORTHO05D004229 3.6e-14 82.0 73 61.6
TAR625G0926 Trochodendron aralioides HOM05D002027 ORTHO05D004229 1.8e-13 79.7 111 43.2
Nn3g16699 Nelumbo nucifera HOM05D002027 ORTHO05D004229 3.1e-13 79.0 113 47.8
PGR142G2457 Punica granatum HOM05D002027 ORTHO05D004229 5.2e-13 78.2 103 47.6
Eucgr.I01736 Eucalyptus grandis HOM05D002027 ORTHO05D004229 1.2e-12 77.0 55 67.3
Rhsim10G0015400 Rhododendron simsii HOM05D002027 ORTHO05D024703 2.6e-12 75.9 51 70.6
TWI56G0726 Tripterygium wilfordii HOM05D002027 ORTHO05D004229 9.8e-12 73.9 67 62.7
Gohir.A07G223800 Gossypium hirsutum HOM05D002027 ORTHO05D004229 3.7e-11 72.0 79 54.4
Aqoxy5G03756 Aquilegia oxysepala HOM05D002027 ORTHO05D004229 4.9e-11 71.6 129 37.2
vmacro05870 Vaccinium macrocarpon HOM05D002027 ORTHO05D024703 6.4e-11 71.2 52 71.2
Gorai.001G266000 Gossypium raimondii HOM05D002027 ORTHO05D004229 8.3e-11 70.9 80 52.5
Rhsim10G0016500 Rhododendron simsii HOM05D000047 ORTHO05D000044 1.4e-10 70.1 46 71.7
CDE08G0066 Ceratophyllum demersum HOM05D002027 ORTHO05D004229 3.2e-10 68.9 53 60.4
MBI06_g16063_MAGBIO Magnolia biondii HOM05D002027 ORTHO05D004229 5.4e-10 68.2 114 36.0
PGR142G3625 Punica granatum HOM05D002027 ORTHO05D004229 5.4e-10 68.2 98 45.9
Dinv25731 Davidia involucrata HOM05D000001 ORTHO05D000003 9.2e-10 67.4 114 43.0
Peaxi162Scf00129g01654 Petunia axillaris HOM05D002027 ORTHO05D004229 9.2e-10 67.4 109 42.2
Gohir.D07G230900 Gossypium hirsutum HOM05D002027 ORTHO05D004229 1.2e-09 67.0 79 50.6
PSO832G3286 Papaver somniferum HOM05D002027 ORTHO05D004229 1.6e-09 66.6 53 62.3
Cpa.g.c26638.2 Carica papaya HOM05D002027 ORTHO05D004229 2.0e-09 66.2 128 40.6
HanXRQChr09g0255251 Helianthus annuus HOM05D002027 ORTHO05D004229 2.0e-09 66.2 77 45.5
Lsat_1_v5_gn_4_184180 Lactuca sativa HOM05D002027 ORTHO05D004229 4.6e-09 65.1 74 47.3
PSO111G0070 Papaver somniferum HOM05D002027 ORTHO05D004229 7.8e-09 64.3 61 59.0
PSO063G1117 Papaver somniferum HOM05D002027 ORTHO05D004229 1.0e-08 63.9 53 60.4
Cfa007345 Carpinus fangiana HOM05D002027 ORTHO05D004229 2.3e-08 62.8 54 55.6
Actinidia36120 Actinidia chinensis HOM05D002027 ORTHO05D004229 3.0e-08 62.4 37 78.4
Cfa007350 Carpinus fangiana HOM05D002027 ORTHO05D004229 3.9e-08 62.0 80 45.0
CANSAT64G1847 Cannabis sativa HOM05D002027 ORTHO05D004229 8.6e-08 60.8 57 56.1
Cfa007348 Carpinus fangiana HOM05D002027 ORTHO05D004229 8.6e-08 60.8 67 47.8
ECA232G2124 Erigeron canadensis HOM05D002027 ORTHO05D004229 1.5e-07 60.1 50 56.0
Aqoxy5G03754 Aquilegia oxysepala HOM05D002027 ORTHO05D004229 2.1e-06 56.2 50 62.0


User provided reference genes

Program Settings