Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 1.2e-146 523.1 255 100.0
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 2.9e-108 395.6 202 95.0
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 2.7e-77 292.7 215 66.5
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 1.5e-75 287.0 202 68.8
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 8.0e-74 281.2 208 65.4
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 9.8e-72 274.2 199 70.4
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 4.1e-62 242.3 222 56.8
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 3.6e-58 229.2 205 58.5
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.3e-55 220.7 190 59.5
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 6.4e-55 218.4 198 56.6
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.9e-54 216.9 190 58.4
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 5.4e-54 215.3 156 64.1
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 4.6e-53 212.2 196 55.1
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 3.3e-51 206.1 198 52.0
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 4.3e-51 205.7 171 59.1
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 9.5e-51 204.5 191 55.5
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 1.2e-50 204.1 204 51.0
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 1.6e-50 203.8 206 50.0
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 1.4e-49 200.7 199 54.3
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 3.1e-49 199.5 199 52.3
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 1.3e-47 194.1 193 53.9
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 4.9e-47 192.2 202 51.0
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 1.4e-46 190.7 189 52.4
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 1.9e-46 190.3 181 55.8
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 2.4e-46 189.9 208 47.1
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 1.2e-45 187.6 212 47.2
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 1.2e-45 187.6 143 61.5
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 2.7e-45 186.4 193 51.3
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 3.5e-45 186.0 192 50.0
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 4.6e-45 185.7 198 50.5
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 6.0e-45 185.3 205 45.4
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 1.3e-44 184.1 193 52.3
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 1.7e-44 183.7 164 55.5
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 1.7e-44 183.7 193 50.8
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 2.3e-44 183.3 213 48.8
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 3.0e-44 183.0 146 62.3
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 3.0e-44 183.0 193 49.2
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 3.9e-44 182.6 166 55.4
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 5.1e-44 182.2 190 52.1
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 6.6e-44 181.8 192 49.5
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 1.1e-43 181.0 199 46.7
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 1.5e-43 180.6 177 50.3
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 2.5e-43 179.9 202 46.0
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 5.6e-43 178.7 209 45.9
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 7.3e-43 178.3 166 54.8
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.6e-42 177.2 204 46.1
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 2.8e-42 176.4 164 52.4
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 2.8e-42 176.4 162 54.3
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 8.1e-42 174.9 209 48.3
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 1.1e-41 174.5 154 55.8
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 2.4e-41 173.3 157 52.2
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 3.1e-41 172.9 151 52.3
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 4.0e-41 172.6 202 46.0
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 9.9e-40 167.9 156 53.8
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 1.3e-39 167.5 196 46.4
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 1.3e-39 167.5 140 58.6
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 2.2e-39 166.8 192 45.3
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 3.8e-39 166.0 199 46.2
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 8.4e-39 164.9 198 45.5
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 8.4e-39 164.9 190 47.9
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.1e-38 164.5 205 43.9
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 7.1e-38 161.8 159 51.6
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 7.1e-38 161.8 159 51.6
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 7.1e-38 161.8 159 51.6
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 7.1e-38 161.8 159 51.6
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 7.1e-38 161.8 196 43.4
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 2.1e-37 160.2 159 51.6
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 2.1e-37 160.2 158 48.1
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 2.1e-37 160.2 191 44.0
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 2.1e-37 160.2 191 44.0
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 2.1e-37 160.2 191 44.0
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 2.7e-37 159.8 155 51.6
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 6.0e-37 158.7 158 51.3
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 6.0e-37 158.7 194 44.8
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 1.1e-35 154.5 178 47.2
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 4.3e-35 152.5 145 51.7
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 2.1e-34 150.2 195 45.6
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 8.1e-34 148.3 109 64.2
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 1.1e-33 147.9 159 47.8
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 1.4e-33 147.5 132 53.8
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 3.1e-33 146.4 173 46.8
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 5.3e-33 145.6 155 47.7
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 4.4e-32 142.5 172 44.2
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 4.4e-32 142.5 134 52.2
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 5.8e-32 142.1 220 42.3
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 7.6e-32 141.7 106 62.3
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 2.2e-31 140.2 156 46.8
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 2.9e-31 139.8 144 50.0
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 8.4e-31 138.3 135 50.4
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 1.4e-30 137.5 194 40.7
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 1.9e-30 137.1 196 42.3
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 3.2e-30 136.3 144 43.8
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 4.2e-30 136.0 184 40.8
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 7.9e-29 131.7 170 42.4
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 1.3e-28 131.0 170 45.3
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 2.3e-28 130.2 222 38.7
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 6.6e-28 128.6 134 46.3
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 5.6e-27 125.6 176 41.5
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 1.3e-26 124.4 147 44.9
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 2.8e-26 123.2 137 47.4
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 4.5e-24 115.9 118 49.2
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 5.4e-22 109.0 154 43.5
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 6.7e-20 102.1 155 39.4
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 7.4e-19 98.6 142 36.6
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 5.3e-17 92.4 77 54.5
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 2.5e-14 83.6 62 59.7
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.7e-13 80.1 60 55.0
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 7.4e-11 72.0 61 50.8
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 3.7e-10 69.7 154 33.1
ECA248G1721 Erigeron canadensis HOM05D007181 ORTHO05D008722 1.5e-08 64.3 90 43.3


User provided reference genes

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