Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010375 Camellia sinensis var. sinensis HOM05D008555 ORTHO05D010760 0.0e+00 1202.6 656 100.0
Dinv37190 Davidia involucrata HOM05D008555 ORTHO05D010760 9.0e-178 627.9 662 58.0
Rhsim05G0190300 Rhododendron simsii HOM05D008555 ORTHO05D010760 2.7e-150 536.6 680 51.3
vmacro20136 Vaccinium macrocarpon HOM05D008555 ORTHO05D010760 7.7e-113 412.1 544 49.8
GSVIVG01034198001 Vitis vinifera HOM05D008555 ORTHO05D010760 4.7e-102 376.3 655 41.1
Cfa017405 Carpinus fangiana HOM05D008555 ORTHO05D010760 5.6e-95 352.8 744 35.6
QL07p031190 Quercus lobata HOM05D008555 ORTHO05D010760 1.1e-85 322.0 645 36.1
QL07p047905 Quercus lobata HOM05D008555 ORTHO05D010760 5.2e-85 319.7 645 36.0
Haze_20761 Corylus avellana HOM05D008555 ORTHO05D010760 1.1e-77 295.4 926 29.8
MD04G1125500 Malus domestica HOM05D008555 ORTHO05D010760 6.2e-70 269.6 652 34.5
TAR623G0003 Trochodendron aralioides HOM05D008555 ORTHO05D010760 6.9e-69 266.2 671 34.6
Prupe.6G252400 Prunus persica HOM05D008555 ORTHO05D010760 1.1e-61 242.3 487 36.8
RcHm_v2.0_Chr3g0467001 Rosa chinensis HOM05D008555 ORTHO05D010760 1.4e-61 241.9 634 35.8
FvH4_6g14100 Fragaria vesca HOM05D008555 ORTHO05D010760 4.0e-61 240.4 647 33.1
FAN05G3093 Fragaria x ananassa HOM05D008555 ORTHO05D010760 5.3e-61 240.0 650 33.5
Nn2g12801 Nelumbo nucifera HOM05D008555 ORTHO05D010760 2.2e-59 234.6 653 33.1
FAN09G2752 Fragaria x ananassa HOM05D008555 ORTHO05D010760 7.9e-57 226.1 634 31.5
MBI05_g06539_MAGBIO Magnolia biondii HOM05D008555 ORTHO05D010760 2.1e-54 218.0 403 38.2
Thecc.05G042000 Theobroma cacao HOM05D008555 ORTHO05D010760 6.9e-53 213.0 540 35.0
Gohir.A09G157300 Gossypium hirsutum HOM05D008555 ORTHO05D010760 2.9e-51 207.6 530 35.5
Manes.08G133801 Manihot esculenta HOM05D008555 ORTHO05D010760 2.9e-51 207.6 561 32.3
Gohir.D09G152600 Gossypium hirsutum HOM05D008555 ORTHO05D010760 3.8e-51 207.2 540 34.8
FAN02G2195 Fragaria x ananassa HOM05D008555 ORTHO05D010760 5.5e-50 203.4 647 29.4
Cc06_g02800 Coffea canephora HOM05D008555 ORTHO05D010760 1.0e-48 199.1 180 55.0
Hund09315 Selenicereus undatus HOM05D008555 ORTHO05D010760 1.0e-48 199.1 247 45.3
Duzib093G2048 Durio zibethinus HOM05D008555 ORTHO05D010760 3.9e-48 197.2 527 34.9
Aqoxy4G02966 Aquilegia oxysepala HOM05D008555 ORTHO05D010760 1.5e-47 195.3 775 28.9
Sc20g0004840 Simmondsia chinensis HOM05D008555 ORTHO05D010760 9.6e-47 192.6 294 39.5
Lsat_1_v5_gn_8_82700 Lactuca sativa HOM05D008555 ORTHO05D010760 4.5e-44 183.7 246 43.9
HanXRQChr04g0124781 Helianthus annuus HOM05D008555 ORTHO05D010760 1.0e-43 182.6 191 50.8
ECA236G1276 Erigeron canadensis HOM05D008555 ORTHO05D010760 1.9e-42 178.3 424 32.3
Eucgr.A01250 Eucalyptus grandis HOM05D008555 ORTHO05D010760 5.5e-42 176.8 541 30.5
Migut.J00343 Erythranthe guttata HOM05D008555 ORTHO05D010760 1.6e-41 175.3 464 29.1
SGA_v2.0_scaffold126G33802 Striga asiatica HOM05D008555 ORTHO05D010760 1.3e-40 172.2 184 48.4
SalBow3G1082 Salvia bowleyana HOM05D008555 ORTHO05D010760 2.0e-36 158.3 430 33.0
EL10Ac1g01982 Beta vulgaris HOM05D008555 ORTHO05D010760 3.4e-36 157.5 630 30.0
PSO339G2550 Papaver somniferum HOM05D008555 ORTHO05D010760 1.7e-35 155.2 165 50.9
PSO384G5088 Papaver somniferum HOM05D008555 ORTHO05D010760 3.8e-35 154.1 165 50.9
HPP92_014313 Vanilla planifolia HOM05D008555 ORTHO05D010760 4.2e-34 150.6 234 38.0
Oeu024357.1 Olea europaea HOM05D008555 ORTHO05D010760 1.1e-31 142.5 535 31.4
Lsat_1_v5_gn_3_51821 Lactuca sativa HOM05D008555 ORTHO05D010760 1.5e-31 142.1 162 49.4
AUR62019574 Chenopodium quinoa HOM05D008555 ORTHO05D010760 1.3e-30 139.0 608 25.8
AUR62042775 Chenopodium quinoa HOM05D008555 ORTHO05D010760 6.3e-30 136.7 606 27.2
Gorai.006G174100 Gossypium raimondii HOM05D008555 ORTHO05D010760 1.1e-26 125.9 463 31.5
Actinidia26453 Actinidia chinensis HOM05D056927 ORTHO05D038143 1.6e-12 79.0 58 67.2
Actinidia26451 Actinidia chinensis HOM05D056927 ORTHO05D038143 3.8e-11 74.3 53 66.0
FAN14G0987 Fragaria x ananassa HOM05D008555 ORTHO05D010760 6.8e-08 63.5 252 29.4
COL.COLO4_14830 Corchorus olitorius HOM05D008555 ORTHO05D010760 2.2e-06 58.5 730 21.5
PGR083G0022 Punica granatum HOM05D001613 ORTHO05D001556 2.2e-06 58.5 77 39.0
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 8.3e-06 56.6 125 32.8


User provided reference genes

Program Settings