Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010331 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 4.7e-207 724.5 440 100.0
Actinidia16784 Actinidia chinensis HOM05D004030 ORTHO05D004952 1.5e-141 506.9 341 80.4
Dinv16793 Davidia involucrata HOM05D004030 ORTHO05D004952 2.6e-133 479.6 328 76.2
Rhsim13G0189000 Rhododendron simsii HOM05D004030 ORTHO05D004952 2.9e-132 476.1 459 66.0
TAR627G0229 Trochodendron aralioides HOM05D004030 ORTHO05D004952 4.5e-125 452.2 443 59.8
GSVIVG01021235001 Vitis vinifera HOM05D004030 ORTHO05D004952 6.1e-122 441.8 341 70.4
vmacro03922 Vaccinium macrocarpon HOM05D004030 ORTHO05D004952 3.0e-121 439.5 597 51.6
CANSAT80G0365 Cannabis sativa HOM05D004030 ORTHO05D004952 6.6e-116 421.8 330 67.0
Glyma.04G063400 Glycine max HOM05D004030 ORTHO05D004952 1.9e-115 420.2 329 68.4
Dinv40699 Davidia involucrata HOM05D004030 ORTHO05D004952 5.5e-115 418.7 283 78.4
Prupe.4G063800 Prunus persica HOM05D004030 ORTHO05D004952 9.5e-115 417.9 329 68.1
CiPaw.09G071100 Carya illinoinensis HOM05D004030 ORTHO05D004952 2.0e-112 410.2 330 67.3
Phvul.009G089700 Phaseolus vulgaris HOM05D004030 ORTHO05D004952 1.3e-111 407.5 329 67.8
Thecc.06G168200 Theobroma cacao HOM05D004030 ORTHO05D004952 1.7e-111 407.1 342 66.1
Nn3g19533 Nelumbo nucifera HOM05D004030 ORTHO05D004952 2.2e-111 406.8 342 64.3
Cfa013812 Carpinus fangiana HOM05D004030 ORTHO05D004952 3.7e-111 406.0 329 68.1
ECA248G1387 Erigeron canadensis HOM05D004030 ORTHO05D004952 8.3e-111 404.8 339 64.9
Cfa000628 Carpinus fangiana HOM05D004030 ORTHO05D004952 1.8e-110 403.7 330 68.8
Ca_10308_v3 Cicer arietinum L. HOM05D004030 ORTHO05D004952 1.2e-109 401.0 332 66.3
Aqoxy1G02017 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 6.6e-108 395.2 336 64.0
MBI07_g09555_MAGBIO Magnolia biondii HOM05D004030 ORTHO05D004952 1.9e-107 393.7 336 63.7
Ciclev10015509m.g Citrus clementina HOM05D004030 ORTHO05D004952 4.3e-107 392.5 338 65.1
MELO3C002663.2 Cucumis melo HOM05D004030 ORTHO05D004952 4.3e-107 392.5 330 66.7
MD10G1277900 Malus domestica HOM05D004030 ORTHO05D004952 9.5e-107 391.3 328 66.2
ClCG03G007580 Citrullus lanatus HOM05D004030 ORTHO05D004952 1.6e-106 390.6 331 66.8
Medtr1g087790 Medicago truncatula HOM05D004030 ORTHO05D004952 3.6e-106 389.4 450 52.7
VMungo1309G1983 Vigna mungo HOM05D004030 ORTHO05D004952 3.6e-106 389.4 348 63.2
PGSC0003DMG400028477 Solanum tuberosum HOM05D004030 ORTHO05D004952 6.1e-106 388.7 331 65.6
QL05p048142 Quercus lobata HOM05D004030 ORTHO05D004952 8.0e-106 388.3 315 67.6
MD05G1298600 Malus domestica HOM05D004030 ORTHO05D004952 1.0e-105 387.9 329 66.3
Sopen02g021480 Solanum pennellii HOM05D004030 ORTHO05D004952 1.8e-105 387.1 331 65.9
Duzib235G1256 Durio zibethinus HOM05D004030 ORTHO05D004952 4.0e-105 386.0 340 63.5
Gohir.D10G036800 Gossypium hirsutum HOM05D004030 ORTHO05D004952 4.0e-105 386.0 338 64.2
Solyc02g072510.3 Solanum lycopersicum HOM05D004030 ORTHO05D004952 8.9e-105 384.8 331 65.3
Sed0004310 Sechium edule HOM05D004030 ORTHO05D004952 2.0e-104 383.6 330 65.2
Haze_22485 Corylus avellana HOM05D004030 ORTHO05D004952 3.4e-104 382.9 307 67.8
arahy.Tifrunner.gnm1.ann1.6TT57W Arachis hypogaea HOM05D004030 ORTHO05D004952 4.4e-104 382.5 341 63.3
CsaV3_1G033240 Cucumis sativus L. HOM05D004030 ORTHO05D004952 4.4e-104 382.5 323 65.3
Migut.M01023 Erythranthe guttata HOM05D004030 ORTHO05D004952 4.4e-104 382.5 332 63.0
Gohir.A10G036100 Gossypium hirsutum HOM05D004030 ORTHO05D004952 7.5e-104 381.7 336 63.4
SGA_v2.0_scaffold1G00064 Striga asiatica HOM05D004030 ORTHO05D004952 1.7e-103 380.6 469 52.0
CAN.G411.88 Capsicum annuum HOM05D004030 ORTHO05D004952 4.1e-102 375.9 330 64.2
Oeu043115.1 Olea europaea HOM05D004030 ORTHO05D004952 1.2e-101 374.4 334 60.5
Manes.16G041300 Manihot esculenta HOM05D004030 ORTHO05D004952 4.6e-101 372.5 319 64.6
Eucgr.E02762 Eucalyptus grandis HOM05D004030 ORTHO05D004952 6.0e-101 372.1 336 61.3
Haze_06204 Corylus avellana HOM05D004030 ORTHO05D004952 7.8e-101 371.7 324 65.1
DCAR_020881 Daucus carota HOM05D004030 ORTHO05D004952 7.8e-101 371.7 470 51.1
arahy.Tifrunner.gnm1.ann1.HYDG6Q Arachis hypogaea HOM05D004030 ORTHO05D004952 5.0e-100 369.0 397 54.7
Lj6g0006857 Lotus japonicus HOM05D004030 ORTHO05D004952 4.3e-99 365.9 447 51.2
Cc02_g15190 Coffea canephora HOM05D004030 ORTHO05D004952 7.3e-99 365.2 332 62.0
COL.COLO4_31267 Corchorus olitorius HOM05D004030 ORTHO05D004952 7.3e-99 365.2 358 59.8
DCAR_005202 Daucus carota HOM05D004030 ORTHO05D004952 9.5e-99 364.8 479 50.1
SalBow8G0896 Salvia bowleyana HOM05D004030 ORTHO05D004952 2.1e-98 363.6 489 48.7
Peaxi162Scf00302g00311 Petunia axillaris HOM05D004030 ORTHO05D004952 1.1e-97 361.3 442 53.8
Lalb_Chr18g0054631 Lupinus albus HOM05D004030 ORTHO05D004952 1.4e-97 360.9 331 62.2
Potri.011G068100 Populus trichocarpa HOM05D004030 ORTHO05D004952 1.4e-97 360.9 330 61.5
TWI39G0053 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 1.8e-97 360.5 330 62.1
Gorai.011G038700 Gossypium raimondii HOM05D004030 ORTHO05D004952 4.0e-97 359.4 322 62.4
arahy.Tifrunner.gnm1.ann1.M207AG Arachis hypogaea HOM05D004030 ORTHO05D004952 2.0e-96 357.1 322 62.4
Hund21166 Selenicereus undatus HOM05D004030 ORTHO05D004952 3.4e-96 356.3 330 61.2
EL10Ac8g20580 Beta vulgaris HOM05D004030 ORTHO05D004952 7.5e-96 355.1 329 59.6
Nitab4.5_0007465g0050 Nicotiana tabacum HOM05D004030 ORTHO05D004952 2.3e-92 343.6 336 60.4
Nitab4.5_0005171g0040 Nicotiana tabacum HOM05D004030 ORTHO05D004952 3.9e-92 342.8 338 60.1
CDE10G0195 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 6.6e-92 342.0 335 59.4
Potri.004G058700 Populus trichocarpa HOM05D004030 ORTHO05D004952 2.1e-90 337.0 447 50.3
Duzib160G0274 Durio zibethinus HOM05D004030 ORTHO05D004952 6.2e-90 335.5 324 58.0
HanXRQChr11g0350521 Helianthus annuus HOM05D004030 ORTHO05D004952 6.2e-90 335.5 324 61.4
Glyma.06G064600 Glycine max HOM05D004030 ORTHO05D004952 2.3e-89 333.6 271 65.3
RcHm_v2.0_Chr5g0011231 Rosa chinensis HOM05D004030 ORTHO05D004952 2.2e-87 327.0 330 58.5
FvH4_3g07540 Fragaria vesca HOM05D004030 ORTHO05D004952 1.6e-85 320.9 330 57.9
FAN11G3556 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.6e-85 320.9 330 57.9
SEGI_23147 Sequoiadendron giganteum HOM05D004030 ORTHO05D004952 2.1e-85 320.5 349 53.3
Actinidia35586 Actinidia chinensis HOM05D004030 ORTHO05D004952 6.0e-85 318.9 337 57.6
PSO063G1415 Papaver somniferum HOM05D004030 ORTHO05D004952 6.0e-85 318.9 384 53.9
Psat6g163160 Pisum sativum HOM05D004030 ORTHO05D004952 1.7e-84 317.4 381 50.4
AUR62027698 Chenopodium quinoa HOM05D004030 ORTHO05D004952 2.3e-84 317.0 327 54.4
Ah.09g233420 Amaranthus hybridus HOM05D004030 ORTHO05D004952 3.9e-84 316.2 316 57.6
PSO782G4674 Papaver somniferum HOM05D004030 ORTHO05D004952 1.9e-83 313.9 384 50.8
AUR62031227 Chenopodium quinoa HOM05D004030 ORTHO05D004952 4.3e-83 312.8 316 55.7
FAN25G0294 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.6e-82 310.8 330 56.1
arahy.Tifrunner.gnm1.ann1.JIP48Q Arachis hypogaea HOM05D004030 ORTHO05D004952 3.6e-82 309.7 319 57.4
FAN21G1198 Fragaria x ananassa HOM05D004030 ORTHO05D004952 6.2e-82 308.9 330 56.4
Sabra11G0049100 Salix brachista HOM05D004030 ORTHO05D004952 1.8e-81 307.4 487 44.4
FAN11G0126 Fragaria x ananassa HOM05D004030 ORTHO05D004952 5.8e-80 302.4 330 55.2
Os01g0759700 Oryza sativa ssp. japonica HOM05D004030 ORTHO05D004952 5.8e-80 302.4 331 53.5
Zm00001eb370530 Zea mays HOM05D004030 ORTHO05D004952 6.4e-79 298.9 335 53.7
Sp1g25170 Schrenkiella parvula HOM05D004030 ORTHO05D004952 1.9e-78 297.4 226 69.0
ATR0824G134 Amborella trichopoda HOM05D004030 ORTHO05D004952 5.4e-78 295.8 314 54.5
Nn1g02598 Nelumbo nucifera HOM05D004030 ORTHO05D004952 1.6e-77 294.3 217 73.3
PGR031G0618 Punica granatum HOM05D004030 ORTHO05D004952 4.6e-77 292.7 278 59.7
Sc07g0007700 Simmondsia chinensis HOM05D004030 ORTHO05D004952 4.6e-77 292.7 238 63.9
HPP92_021480 Vanilla planifolia HOM05D004030 ORTHO05D004952 6.0e-77 292.4 330 50.9
AL1G42980 Arabidopsis lyrata HOM05D004030 ORTHO05D004952 2.5e-75 287.0 279 59.9
Thhalv10008084m.g Eutrema salsugineum HOM05D004030 ORTHO05D004952 3.3e-75 286.6 226 67.7
AT1G29220 Arabidopsis thaliana HOM05D004030 ORTHO05D004952 4.3e-75 286.2 287 58.2
FvH4_3g37800 Fragaria vesca HOM05D004030 ORTHO05D004952 9.6e-75 285.0 318 53.5
Lsat_1_v5_gn_1_111240 Lactuca sativa HOM05D004030 ORTHO05D004952 2.1e-74 283.9 323 53.3
Manes.17G057500 Manihot esculenta HOM05D004030 ORTHO05D004952 6.2e-74 282.3 250 60.4
BcaB07g32509 Brassica carinata HOM05D004030 ORTHO05D004952 5.3e-73 279.3 225 68.0
TPR.G40724 Trifolium pratense HOM05D004030 ORTHO05D004952 6.9e-73 278.9 189 73.5
A09p37120 Brassica napus HOM05D004030 ORTHO05D004952 2.0e-72 277.3 285 58.9
CARHR028550 Cardamine hirsuta HOM05D004030 ORTHO05D004952 2.0e-72 277.3 282 58.2
BcaC05g26946 Brassica carinata HOM05D004030 ORTHO05D004952 3.4e-72 276.6 285 59.3
C05p27930 Brassica napus HOM05D004030 ORTHO05D004952 3.4e-72 276.6 285 59.3
Carub.0001s2743 Capsella rubella HOM05D004030 ORTHO05D004952 3.4e-72 276.6 275 58.5
arahy.Tifrunner.gnm1.ann1.G7P63M Arachis hypogaea HOM05D004030 ORTHO05D004952 4.4e-72 276.2 311 52.4
Atru.chr10.1642 Acer truncatum HOM05D004030 ORTHO05D004952 2.2e-71 273.9 244 60.7
Aa31LG6G6290 Aethionema arabicum HOM05D004030 ORTHO05D004952 3.8e-71 273.1 312 51.9
FAN16G1462 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.1e-70 271.6 311 54.7
BraA09t39228Z Brassica rapa HOM05D004030 ORTHO05D004952 3.2e-70 270.0 291 57.7
BolC5t31519H Brassica oleracea HOM05D004030 ORTHO05D004952 1.2e-69 268.1 301 56.5
THA.LOC104820602 Tarenaya hassleriana HOM05D004030 ORTHO05D004952 2.2e-63 247.3 251 57.0
SalBow5G1441 Salvia bowleyana HOM05D004030 ORTHO05D004952 7.9e-61 238.8 325 47.7
TWI63G1163 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 1.9e-59 234.2 254 52.0
arahy.Tifrunner.gnm1.ann1.LWKQ47 Arachis hypogaea HOM05D004030 ORTHO05D004952 3.4e-56 223.4 199 60.3
Lj1A1189T62 Lonicera japonica HOM05D004030 ORTHO05D004952 1.3e-52 211.5 189 63.0
Sabra04G0038000 Salix brachista HOM05D004030 ORTHO05D004952 1.1e-51 208.4 294 47.3
HPP92_010042 Vanilla planifolia HOM05D004030 ORTHO05D004952 2.5e-51 207.2 268 47.8
Mapoly0022s0014 Marchantia polymorpha HOM05D004030 ORTHO05D004952 9.6e-51 205.3 335 43.6
Lalb_Chr15g0086161 Lupinus albus HOM05D004030 ORTHO05D004952 2.6e-48 197.2 203 53.7
Actinidia37045 Actinidia chinensis HOM05D004030 ORTHO05D004952 1.0e-47 195.3 256 48.8
Lj9A197T43 Lonicera japonica HOM05D004030 ORTHO05D004952 1.7e-47 194.5 152 71.7
Ah.16g107150 Amaranthus hybridus HOM05D004030 ORTHO05D004952 3.2e-46 190.3 198 54.0
Cpa.g.sc7.87 Carica papaya HOM05D004030 ORTHO05D004952 4.2e-46 189.9 137 75.2
SHI28530 Sapria himalayana HOM05D004030 ORTHO05D004952 1.1e-43 181.8 194 52.1
COL.COLO4_06310 Corchorus olitorius HOM05D004030 ORTHO05D004952 1.9e-43 181.0 250 46.8
AagrBONN_evm.TU.Sc2ySwM_362.2754 Anthoceros agrestis HOM05D004030 ORTHO05D004952 9.7e-43 178.7 367 37.9
Zm00001eb152490 Zea mays HOM05D004030 ORTHO05D004952 4.8e-42 176.4 199 50.8
AagrBONN_evm.TU.Sc2ySwM_344.2041 Anthoceros agrestis HOM05D004030 ORTHO05D004952 3.1e-41 173.7 357 37.0
unitig_899.g15398 Utricularia gibba HOM05D004030 ORTHO05D004952 2.2e-39 167.5 330 37.0
SMO266G0004 Selaginella moellendorffii HOM05D004030 ORTHO05D004952 3.2e-38 163.7 323 37.8
BcaB03g13895 Brassica carinata HOM05D004030 ORTHO05D004952 2.5e-35 154.1 160 56.2
CDE10G0435 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 4.8e-34 149.8 141 58.2
Lsat_1_v5_gn_6_74880 Lactuca sativa HOM05D004030 ORTHO05D004952 4.8e-34 149.8 167 50.3
Peaxi162Scf00912g00019 Petunia axillaris HOM05D004030 ORTHO05D004952 3.1e-33 147.1 209 45.9
CSS0023477 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 2.0e-32 144.4 70 95.7
CSS0043633 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 4.5e-32 143.3 92 82.6
CSS0003365 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 7.7e-32 142.5 70 94.3
CSS0023566 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 5.0e-31 139.8 84 88.1
Aqoxy2G00428 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 1.9e-30 137.9 191 46.1
CAN.G566.51 Capsicum annuum HOM05D004030 ORTHO05D004952 4.4e-27 126.7 194 43.3
SalBow5G5223 Salvia bowleyana HOM05D004030 ORTHO05D004952 9.7e-27 125.6 70 84.3
Nitab4.5_0000271g0330 Nicotiana tabacum HOM05D004030 ORTHO05D004952 8.2e-26 122.5 114 57.9
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 1.4e-25 121.7 120 55.0
CSS0039806 Camellia sinensis var. sinensis HOM05D043465 ORTHO05D033917 7.0e-25 119.4 134 55.2
SalBow5G1832 Salvia bowleyana HOM05D004030 ORTHO05D002854 7.0e-25 119.4 247 38.9
Nitab4.5_0004602g0020 Nicotiana tabacum HOM05D004030 ORTHO05D004952 9.1e-25 119.0 130 50.8
Ah.16g108320 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.6e-24 118.2 69 76.8
CSS0019808 Camellia sinensis var. sinensis HOM05D043465 ORTHO05D033917 5.9e-24 116.3 134 56.7
SalBow5G5317 Salvia bowleyana HOM05D004030 ORTHO05D004952 2.2e-23 114.4 250 37.2
CBR_g31948 Chara braunii HOM05D004030 ORTHO05D004952 3.0e-20 104.0 89 51.7
SalBow5G5526 Salvia bowleyana HOM05D004030 ORTHO05D004952 6.7e-20 102.8 233 37.3
Pp3c22_6900 Physcomitrium patens HOM05D004030 ORTHO05D004952 3.3e-19 100.5 87 52.9
FAN23G1607 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.1e-17 95.5 99 51.5
Lalb_Chr15g0086171 Lupinus albus HOM05D004030 ORTHO05D004952 2.7e-16 90.9 82 61.0
SalBow5G0967 Salvia bowleyana HOM05D004030 ORTHO05D004952 7.2e-14 82.8 76 59.2
MCO08G144 Micromonas commoda HOM05D004030 ORTHO05D004952 1.8e-12 78.2 99 39.4
Ah.16g108870 Amaranthus hybridus HOM05D004030 ORTHO05D004952 6.8e-12 76.3 238 31.1
Ah.16g108300 Amaranthus hybridus HOM05D004030 ORTHO05D004952 8.8e-12 75.9 238 31.1
Ah.16g108330 Amaranthus hybridus HOM05D004030 ORTHO05D004952 8.8e-12 75.9 238 31.1
Ah.16g108890 Amaranthus hybridus HOM05D004030 ORTHO05D004952 6.3e-10 69.7 253 29.2
Pp3c21_660 Physcomitrium patens HOM05D004030 ORTHO05D004952 7.0e-09 66.2 282 25.2
SalBow5G1360 Salvia bowleyana HOM05D004030 ORTHO05D004952 2.9e-07 60.8 71 53.5
Lj5g0018916 Lotus japonicus HOM05D004030 ORTHO05D004952 5.0e-07 60.1 84 46.4
TPR.G16979 Trifolium pratense HOM05D004030 ORTHO05D004952 6.5e-07 59.7 50 62.0


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