Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 2.9e-219 765.0 410 100.0
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 4.8e-129 465.3 337 77.4
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 3.5e-119 432.6 340 75.6
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 1.3e-118 430.6 338 71.3
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 1.1e-117 427.6 336 72.0
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 1.2e-116 424.1 336 69.6
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 4.0e-115 419.1 397 64.2
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 8.8e-115 417.9 332 70.5
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 8.8e-115 417.9 338 71.6
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 2.0e-114 416.8 336 68.8
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 2.6e-114 416.4 338 71.0
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.8e-114 414.5 336 69.9
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 4.8e-113 412.1 336 68.2
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 3.1e-112 409.5 347 68.3
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 7.0e-112 408.3 336 67.6
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.1e-112 407.9 342 68.1
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.2e-110 403.3 336 68.5
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 5.0e-110 402.1 358 64.8
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 5.0e-110 402.1 355 67.3
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 6.5e-110 401.7 364 63.7
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 8.5e-110 401.4 336 68.2
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 3.2e-109 399.4 336 68.8
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 4.2e-109 399.1 336 67.9
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 2.1e-108 396.7 273 81.3
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 1.0e-107 394.4 336 68.5
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.4e-107 394.0 336 67.9
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.8e-107 393.7 336 66.1
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 2.0e-106 390.2 339 67.0
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 2.8e-105 386.3 330 68.2
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 4.9e-105 385.6 288 71.2
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 1.4e-104 384.0 342 63.7
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 1.8e-104 383.6 355 65.6
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 2.4e-104 383.3 332 66.0
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 7.0e-104 381.7 273 78.4
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 1.2e-103 380.9 347 65.7
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 3.5e-103 379.4 335 66.3
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 1.7e-102 377.1 333 65.8
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 2.9e-102 376.3 337 64.4
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 1.1e-101 374.4 332 66.0
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 2.5e-101 373.2 336 62.8
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 4.2e-101 372.5 355 62.5
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 7.2e-101 371.7 354 63.0
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 8.9e-99 364.8 330 63.0
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 1.5e-98 364.0 341 61.9
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 3.4e-98 362.8 330 62.4
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.3e-97 360.9 335 61.5
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 2.9e-97 359.8 351 65.0
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 2.9e-97 359.8 352 61.6
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 6.3e-97 358.6 335 61.2
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 3.2e-96 356.3 333 61.3
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 1.2e-95 354.4 366 59.0
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 1.6e-95 354.0 354 59.9
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 2.7e-95 353.2 333 60.7
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 2.7e-95 353.2 333 60.7
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 4.6e-95 352.4 333 60.7
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 1.0e-94 351.3 337 58.8
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 2.9e-94 349.7 339 61.4
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 5.6e-93 345.5 342 60.8
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 7.3e-93 345.1 344 59.6
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 2.8e-92 343.2 335 59.1
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 2.8e-92 343.2 338 59.8
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 1.4e-91 340.9 382 56.0
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 5.2e-91 339.0 336 59.8
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 6.8e-91 338.6 337 61.1
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 1.2e-90 337.8 338 58.3
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.5e-90 337.4 344 62.2
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.5e-90 337.4 351 61.8
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 3.4e-90 336.3 336 58.9
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 8.3e-89 331.6 327 61.8
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 4.1e-88 329.3 330 60.9
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 1.7e-86 323.9 338 59.8
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 2.3e-86 323.6 352 58.0
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 1.5e-85 320.9 336 58.9
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 6.2e-84 315.5 344 54.9
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 4.0e-83 312.8 274 67.5
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 5.2e-83 312.4 336 58.0
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 6.8e-83 312.0 335 57.0
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 5.8e-82 308.9 405 50.1
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 6.4e-81 305.4 334 55.1
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 9.2e-80 301.6 335 54.0
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 5.1e-78 295.8 343 53.9
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.1e-77 294.7 385 50.1
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 4.7e-76 289.3 276 63.0
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.1e-75 288.1 332 55.4
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 3.1e-75 286.6 330 53.6
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 3.1e-75 286.6 353 54.4
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 9.9e-74 281.6 334 52.7
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 1.9e-72 277.3 313 55.6
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 3.2e-72 276.6 337 51.0
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 7.8e-71 271.9 382 48.2
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 9.6e-69 265.0 338 53.0
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.3e-65 254.6 322 50.0
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 9.3e-64 248.4 243 63.0
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 2.1e-55 220.7 272 50.0
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 2.1e-52 210.7 353 43.9
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 1.8e-51 207.6 319 46.7
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 7.6e-50 202.2 331 42.6
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 2.4e-48 197.2 276 47.5
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 4.2e-48 196.4 340 42.6
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 7.9e-47 192.2 148 73.6
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.3e-46 190.7 237 53.2
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 1.9e-45 187.6 388 38.1
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 1.6e-44 184.5 219 50.2
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 6.9e-43 179.1 171 64.3
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 5.5e-40 169.5 116 79.3
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.2e-39 168.3 177 55.4
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 3.3e-37 160.2 373 35.4
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 2.6e-26 124.0 100 72.0
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 7.7e-26 122.5 100 71.0
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 2.5e-21 107.5 173 45.1
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 4.3e-21 106.7 69 84.1
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 2.8e-20 104.0 62 87.1
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 1.9e-16 91.3 289 32.9
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 6.1e-15 86.3 66 71.2
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 7.4e-13 79.3 87 59.8
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 3.7e-12 77.0 296 30.7
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 2.9e-09 67.4 36 83.3
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 6.5e-09 66.2 117 46.2


User provided reference genes

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