Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010292 Camellia sinensis var. sinensis HOM05D004473 ORTHO05D005652 3.5e-55 218.0 108 100.0
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 3.5e-10 68.6 35 88.6
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.5e-10 68.2 63 57.1
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 5.9e-10 67.8 113 37.2
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 2.2e-09 65.9 35 85.7
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 3.8e-09 65.1 35 82.9
Peaxi162Scf00219g00049 Petunia axillaris HOM05D004473 ORTHO05D005652 5.0e-09 64.7 35 82.9
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.1e-08 63.5 109 38.5
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 1.1e-08 63.5 113 38.1
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 1.9e-08 62.8 35 80.0
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 2.5e-08 62.4 34 85.3
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.2e-08 61.6 35 77.1
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.2e-08 61.6 35 77.1
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 4.2e-08 61.6 35 80.0
Nn1g08463 Nelumbo nucifera HOM05D004473 ORTHO05D005652 5.5e-08 61.2 35 74.3
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 7.2e-08 60.8 35 74.3
MELO3C000879.2 Cucumis melo HOM05D004473 ORTHO05D005652 1.2e-07 60.1 35 74.3
MELO3C027497.2 Cucumis melo HOM05D004473 ORTHO05D005652 1.2e-07 60.1 35 74.3
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 2.7e-07 58.9 35 71.4
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.6e-07 58.5 34 76.5
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.6e-07 58.5 34 76.5
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.6e-07 58.5 34 76.5
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.6e-07 58.5 34 76.5
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.6e-07 58.5 34 76.5
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.6e-07 58.5 34 76.5
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.6e-07 58.5 34 76.5
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.6e-07 58.5 34 76.5
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.6e-07 58.5 34 76.5
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.6e-07 58.5 34 76.5
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.6e-07 58.5 35 77.1
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.6e-07 58.5 35 77.1
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.6e-07 58.5 35 77.1
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.6e-07 58.5 35 77.1
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.6e-07 58.5 35 77.1
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 3.6e-07 58.5 35 77.1
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 4.7e-07 58.2 35 74.3
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.1e-07 57.8 35 74.3
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 8.0e-07 57.4 34 73.5
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 1.0e-06 57.0 36 66.7
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 1.4e-06 56.6 35 68.6
MD15G1438900 Malus domestica HOM05D004473 ORTHO05D005652 1.8e-06 56.2 35 77.1
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 2.3e-06 55.8 31 80.6
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 3.0e-06 55.5 36 66.7
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 4.0e-06 55.1 35 77.1
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.2e-06 54.7 34 73.5


User provided reference genes

Program Settings