Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010278 Camellia sinensis var. sinensis HOM05D000697 ORTHO05D000169 1.7e-55 219.2 114 100.0
vmacro08058 Vaccinium macrocarpon HOM05D000697 ORTHO05D000169 2.3e-28 129.0 138 54.3
CSS0027750 Camellia sinensis var. sinensis HOM05D000697 ORTHO05D000169 6.6e-28 127.5 128 59.4
CSS0025808 Camellia sinensis var. sinensis HOM05D000697 ORTHO05D000169 8.6e-28 127.1 127 59.1
Actinidia40366 Actinidia chinensis HOM05D000697 ORTHO05D000169 4.2e-22 108.2 128 52.3
CDE02G3005 Ceratophyllum demersum HOM05D000697 ORTHO05D000169 3.5e-13 78.6 134 39.6
CDE08G1122 Ceratophyllum demersum HOM05D000697 ORTHO05D000169 3.5e-13 78.6 134 39.6
Rhsim04G0234800 Rhododendron simsii HOM05D000697 ORTHO05D000169 2.3e-12 75.9 94 43.6
TAR365G0994 Trochodendron aralioides HOM05D000697 ORTHO05D000169 2.3e-12 75.9 138 37.0
Nn4g25598 Nelumbo nucifera HOM05D000697 ORTHO05D000169 3.0e-12 75.5 135 37.8
Aqoxy5G02880 Aquilegia oxysepala HOM05D000697 ORTHO05D000169 1.9e-11 72.8 135 39.3
Nn3g21690 Nelumbo nucifera HOM05D000697 ORTHO05D000169 3.3e-11 72.0 142 35.9
Hma1.2p1_0212F.1_g089940 Hydrangea macrophylla HOM05D000697 ORTHO05D000169 4.3e-11 71.6 144 34.7
Dinv24443 Davidia involucrata HOM05D000697 ORTHO05D000169 1.3e-10 70.1 134 37.3
Actinidia25849 Actinidia chinensis HOM05D000697 ORTHO05D000169 2.8e-10 68.9 136 34.6
DCAR_002896 Daucus carota HOM05D000697 ORTHO05D000169 3.6e-10 68.6 142 33.1
DCAR_002897 Daucus carota HOM05D000697 ORTHO05D000169 3.6e-10 68.6 142 33.1
TAR362G0901 Trochodendron aralioides HOM05D000697 ORTHO05D000169 3.6e-10 68.6 140 30.7
PSO170G1051 Papaver somniferum HOM05D000697 ORTHO05D000169 6.2e-10 67.8 136 35.3
Dinv44298 Davidia involucrata HOM05D000697 ORTHO05D000169 8.1e-10 67.4 68 58.8
Oeu019969.1 Olea europaea HOM05D000697 ORTHO05D000169 8.1e-10 67.4 70 58.6
Actinidia20994 Actinidia chinensis HOM05D000697 ORTHO05D000169 1.4e-09 66.6 140 33.6
Aqoxy2G02770 Aquilegia oxysepala HOM05D000697 ORTHO05D000169 1.8e-09 66.2 127 35.4
MBI19_g07239_MAGBIO Magnolia biondii HOM05D000697 ORTHO05D000169 1.8e-09 66.2 142 33.8
Lj6P689T39 Lonicera japonica HOM05D000697 ORTHO05D000169 2.4e-09 65.9 129 38.0
Oeu037315.1 Olea europaea HOM05D000697 ORTHO05D000169 4.0e-09 65.1 141 35.5
Gohir.D11G114200 Gossypium hirsutum HOM05D000697 ORTHO05D000169 5.3e-09 64.7 136 34.6
Gorai.007G122800 Gossypium raimondii HOM05D000697 ORTHO05D000169 6.9e-09 64.3 134 33.6
PSO357G0541 Papaver somniferum HOM05D000697 ORTHO05D000169 6.9e-09 64.3 136 34.6
Potri.002G196200 Populus trichocarpa HOM05D000697 ORTHO05D000169 6.9e-09 64.3 143 33.6
Nitab4.5_0003540g0010 Nicotiana tabacum HOM05D000697 ORTHO05D000169 1.5e-08 63.2 138 36.2
ATR0796G285 Amborella trichopoda HOM05D000697 ORTHO05D000169 2.0e-08 62.8 138 31.2
Oeu008473.1 Olea europaea HOM05D000697 ORTHO05D000169 3.4e-08 62.0 136 33.8
ATR0585G084 Amborella trichopoda HOM05D000697 ORTHO05D000169 4.5e-08 61.6 137 29.9
MD03G1295200 Malus domestica HOM05D000697 ORTHO05D000169 4.5e-08 61.6 133 35.3
Cpa.g.sc18.43 Carica papaya HOM05D000697 ORTHO05D000169 5.8e-08 61.2 142 33.8
Migut.G00047 Erythranthe guttata HOM05D000697 ORTHO05D000169 7.6e-08 60.8 70 51.4
Gohir.A11G110000 Gossypium hirsutum HOM05D000697 ORTHO05D000169 7.6e-08 60.8 134 34.3
Nitab4.5_0008277g0020 Nicotiana tabacum HOM05D000697 ORTHO05D000169 7.6e-08 60.8 144 34.0
CSS0031119 Camellia sinensis var. sinensis HOM05D000697 ORTHO05D000169 9.9e-08 60.5 140 32.9
Dinv33115 Davidia involucrata HOM05D000697 ORTHO05D000169 9.9e-08 60.5 91 41.8
Rhsim01G0290700 Rhododendron simsii HOM05D000697 ORTHO05D000169 9.9e-08 60.5 138 32.6
MSTRG.2807 Avicennia marina HOM05D000754 ORTHO05D000169 1.3e-07 60.1 100 39.0
TAR636G1432 Trochodendron aralioides HOM05D000697 ORTHO05D000169 1.3e-07 60.1 136 33.1
MBI18_g17318_MAGBIO Magnolia biondii HOM05D000697 ORTHO05D000169 1.7e-07 59.7 141 29.8
SalBow8G4726 Salvia bowleyana HOM05D000697 ORTHO05D000169 1.7e-07 59.7 81 48.1
SalBow8G5057 Salvia bowleyana HOM05D000697 ORTHO05D000169 1.7e-07 59.7 81 48.1
COL.COLO4_23232 Corchorus olitorius HOM05D000697 ORTHO05D000169 3.8e-07 58.5 141 33.3
Eucgr.K03544 Eucalyptus grandis HOM05D000697 ORTHO05D000169 3.8e-07 58.5 138 33.3
CSS0019770 Camellia sinensis var. sinensis HOM05D000697 ORTHO05D000169 4.9e-07 58.2 143 31.5
CSS0025819 Camellia sinensis var. sinensis HOM05D000697 ORTHO05D000169 4.9e-07 58.2 143 31.5
CAN.G851.45 Capsicum annuum HOM05D000697 ORTHO05D000169 4.9e-07 58.2 65 50.8
Sabra04G0105600 Salix brachista HOM05D000697 ORTHO05D000169 4.9e-07 58.2 141 29.1
THA.LOC104817459 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 4.9e-07 58.2 127 30.7
Duzib138G1356 Durio zibethinus HOM05D000697 ORTHO05D000169 6.4e-07 57.8 136 33.8
Gohir.A07G128500 Gossypium hirsutum HOM05D000697 ORTHO05D000169 6.4e-07 57.8 122 32.0
Lj1C17T9 Lonicera japonica HOM05D000697 ORTHO05D000169 6.4e-07 57.8 142 29.6
Lj5P334T33 Lonicera japonica HOM05D000697 ORTHO05D000169 6.4e-07 57.8 136 36.8
CAN.G777.13 Capsicum annuum HOM05D000697 ORTHO05D000169 8.4e-07 57.4 143 34.3
Potri.008G106700 Populus trichocarpa HOM05D000697 ORTHO05D000169 8.4e-07 57.4 145 35.2
C08p37270 Brassica napus HOM05D000697 ORTHO05D000169 1.1e-06 57.0 130 30.0
BolC8t51305H Brassica oleracea HOM05D000697 ORTHO05D000169 1.1e-06 57.0 130 30.0
Manes.05G003300 Manihot esculenta HOM05D000697 ORTHO05D000169 1.1e-06 57.0 144 32.6
Oeu038018.1 Olea europaea HOM05D000697 ORTHO05D000169 1.1e-06 57.0 138 31.9
Thecc.02G080900 Theobroma cacao HOM05D000697 ORTHO05D000169 1.1e-06 57.0 64 46.9
Actinidia27046 Actinidia chinensis HOM05D000697 ORTHO05D000169 1.4e-06 56.6 44 70.5
Duzib133G0134 Durio zibethinus HOM05D000697 ORTHO05D000169 1.4e-06 56.6 138 30.4
PGSC0003DMG400003701 Solanum tuberosum HOM05D000697 ORTHO05D000169 1.4e-06 56.6 65 49.2
SGA_v2.0_scaffold18G08400 Striga asiatica HOM05D000697 ORTHO05D000169 1.4e-06 56.6 59 55.9
TWI36G1120 Tripterygium wilfordii HOM05D000697 ORTHO05D000169 1.4e-06 56.6 138 34.1
Dinv15190 Davidia involucrata HOM05D001712 ORTHO05D001731 1.9e-06 56.2 65 52.3
Glyma.06G010200 Glycine max HOM05D000697 ORTHO05D000169 1.9e-06 56.2 78 41.0
Gohir.D07G132900 Gossypium hirsutum HOM05D000697 ORTHO05D000169 1.9e-06 56.2 123 33.3
Gorai.001G144200 Gossypium raimondii HOM05D000697 ORTHO05D000169 1.9e-06 56.2 123 33.3
Nitab4.5_0003313g0060 Nicotiana tabacum HOM05D000697 ORTHO05D000169 1.9e-06 56.2 71 45.1
Solyc02g084860.1 Solanum lycopersicum HOM05D000697 ORTHO05D000169 1.9e-06 56.2 145 29.7
PGSC0003DMG400003529 Solanum tuberosum HOM05D000697 ORTHO05D000169 1.9e-06 56.2 145 29.7
THA.LOC104800343 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 1.9e-06 56.2 143 29.4
THA.LOC104800346 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 1.9e-06 56.2 143 29.4
THA.LOC104827669 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 1.9e-06 56.2 143 29.4
TAR376G0010 Trochodendron aralioides HOM05D000697 ORTHO05D000169 1.9e-06 56.2 137 32.8
VMungo1383G1971 Vigna mungo HOM05D000697 ORTHO05D000169 1.9e-06 56.2 142 33.1
Cc10_g02460 Coffea canephora HOM05D000697 ORTHO05D000169 2.4e-06 55.8 141 30.5
Duzib052G0815 Durio zibethinus HOM05D000697 ORTHO05D000169 2.4e-06 55.8 65 49.2
Lsat_1_v5_gn_7_90381 Lactuca sativa HOM05D000697 ORTHO05D000169 2.4e-06 55.8 72 43.1
Solyc04g080740.1 Solanum lycopersicum HOM05D000697 ORTHO05D000169 2.4e-06 55.8 65 47.7
Sopen04g034330 Solanum pennellii HOM05D000697 ORTHO05D000169 2.4e-06 55.8 65 47.7
Aa31LG10G16350 Aethionema arabicum HOM05D000697 ORTHO05D000169 3.2e-06 55.5 124 29.8
Ah.02g112290 Amaranthus hybridus HOM05D000697 ORTHO05D000169 3.2e-06 55.5 136 30.1
AUR62024652 Chenopodium quinoa HOM05D000697 ORTHO05D000169 3.2e-06 55.5 129 31.8
COL.COLO4_25979 Corchorus olitorius HOM05D000697 ORTHO05D000169 3.2e-06 55.5 67 46.3
PGR083G2421 Punica granatum HOM05D000697 ORTHO05D000169 3.2e-06 55.5 135 30.4
CiPaw.05G068100 Carya illinoinensis HOM05D000697 ORTHO05D000169 4.2e-06 55.1 71 40.8
Cc02_g35020 Coffea canephora HOM05D000697 ORTHO05D000169 4.2e-06 55.1 132 32.6
Lj3g0014331 Lotus japonicus HOM05D000697 ORTHO05D000169 4.2e-06 55.1 71 40.8
Peaxi162Scf00673g00034 Petunia axillaris HOM05D000697 ORTHO05D000169 4.2e-06 55.1 131 35.9
A09p54390 Brassica napus HOM05D000697 ORTHO05D000169 5.5e-06 54.7 130 29.2
BraA09t40851Z Brassica rapa HOM05D000697 ORTHO05D000169 5.5e-06 54.7 130 29.2
AUR62034516 Chenopodium quinoa HOM05D000697 ORTHO05D000169 5.5e-06 54.7 66 50.0
Haze_05040 Corylus avellana HOM05D000697 ORTHO05D000169 5.5e-06 54.7 135 31.9
Thhalv10006418m.g Eutrema salsugineum HOM05D000697 ORTHO05D000169 5.5e-06 54.7 134 27.6
Glyma.04G010300 Glycine max HOM05D000697 ORTHO05D000169 5.5e-06 54.7 64 43.8
Ah.05g176790 Amaranthus hybridus HOM05D000697 ORTHO05D000169 7.1e-06 54.3 77 42.9
AL5G45220 Arabidopsis lyrata HOM05D000697 ORTHO05D000169 7.1e-06 54.3 133 27.8
AT3G62420 Arabidopsis thaliana HOM05D000697 ORTHO05D000169 7.1e-06 54.3 133 27.8
DCAR_030478 Daucus carota HOM05D000697 ORTHO05D000169 7.1e-06 54.3 141 32.6
Dinv10098 Davidia involucrata HOM05D000697 ORTHO05D000169 7.1e-06 54.3 140 31.4
Migut.D00084 Erythranthe guttata HOM05D000697 ORTHO05D000169 7.1e-06 54.3 138 29.7
Peaxi162Scf00418g00083 Petunia axillaris HOM05D000697 ORTHO05D000169 7.1e-06 54.3 64 43.8
Phvul.001G212800 Phaseolus vulgaris HOM05D000697 ORTHO05D000169 7.1e-06 54.3 142 32.4
RcHm_v2.0_Chr2g0100571 Rosa chinensis HOM05D000697 ORTHO05D000169 7.1e-06 54.3 117 34.2
Ah.11g049250 Amaranthus hybridus HOM05D000697 ORTHO05D000169 9.3e-06 53.9 65 46.2
arahy.Tifrunner.gnm1.ann1.6JGL55 Arachis hypogaea HOM05D000697 ORTHO05D000169 9.3e-06 53.9 136 32.4
Ca_15352_v3 Cicer arietinum L. HOM05D000697 ORTHO05D000169 9.3e-06 53.9 69 42.0
CsaV3_2G014980 Cucumis sativus L. HOM05D000697 ORTHO05D000169 9.3e-06 53.9 72 44.4
Manes.01G227900 Manihot esculenta HOM05D000697 ORTHO05D000169 9.3e-06 53.9 144 29.9
Nitab4.5_0000723g0200 Nicotiana tabacum HOM05D000697 ORTHO05D000169 9.3e-06 53.9 145 29.7
Phvul.009G005800 Phaseolus vulgaris HOM05D000697 ORTHO05D000169 9.3e-06 53.9 69 42.0
Psat7g140160 Pisum sativum HOM05D000697 ORTHO05D000169 9.3e-06 53.9 71 40.8
PRCOL_00000407 Prasinoderma coloniale HOM05D000754 ORTHO05D000169 9.3e-06 53.9 69 44.9
TPR.G32194 Trifolium pratense HOM05D000697 ORTHO05D000169 9.3e-06 53.9 70 42.9
TWI18G0286 Tripterygium wilfordii HOM05D000697 ORTHO05D000169 9.3e-06 53.9 135 32.6


User provided reference genes

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