Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010273 Camellia sinensis var. sinensis HOM05D009481 ORTHO05D011450 1.1e-25 119.0 55 100.0
Migut.I00838 Erythranthe guttata HOM05D009481 ORTHO05D011450 8.4e-21 102.8 53 83.0
Hma1.2p1_0682F.1_g202580 Hydrangea macrophylla HOM05D009481 ORTHO05D011450 5.5e-20 100.1 51 82.4
CSS0018590 Camellia sinensis var. sinensis HOM05D009481 ORTHO05D011450 3.9e-18 94.0 53 73.6
Mapoly0083s0095 Marchantia polymorpha HOM05D009481 ORTHO05D011450 4.3e-17 90.5 53 73.6
PSO782G4431 Papaver somniferum HOM05D009481 ORTHO05D011450 4.8e-16 87.0 51 68.6
Phvul.003G176000 Phaseolus vulgaris HOM05D009481 ORTHO05D011450 4.8e-16 87.0 50 72.0
Os01g0178300 Oryza sativa ssp. japonica HOM05D009481 ORTHO05D011450 1.4e-15 85.5 48 72.9
Hma1.2p1_0018F.1_g013080 Hydrangea macrophylla HOM05D009481 ORTHO05D011450 1.8e-15 85.1 51 72.5
Thecc.09G116600 Theobroma cacao HOM05D009481 ORTHO05D011450 3.1e-15 84.3 48 72.9
Manes.16G064250 Manihot esculenta HOM05D009481 ORTHO05D011450 7.6e-14 79.7 53 66.0
GSVIVG01015452001 Vitis vinifera HOM05D009481 ORTHO05D011450 1.7e-13 78.6 45 73.3
Os05g0178300 Oryza sativa ssp. japonica HOM05D009481 ORTHO05D011450 2.9e-13 77.8 50 68.0
CiPaw.04G167400 Carya illinoinensis HOM05D009481 ORTHO05D011450 2.7e-11 71.2 40 72.5
Eucgr.F02575 Eucalyptus grandis HOM05D009481 ORTHO05D011450 5.1e-10 67.0 48 62.5
Dinv36594 Davidia involucrata HOM05D002035 ORTHO05D002032 8.7e-10 66.2 38 71.1
Glyma.13G361300 Glycine max HOM05D009481 ORTHO05D011450 2.5e-09 64.7 51 54.9
Glyma.15G012600 Glycine max HOM05D009481 ORTHO05D011450 4.3e-09 63.9 39 64.1
Os02g0208500 Oryza sativa ssp. japonica HOM05D009481 ORTHO05D011450 9.7e-09 62.8 56 57.1
Sed0026684 Sechium edule HOM05D009481 ORTHO05D011450 4.8e-08 60.5 51 54.9
Mapoly0056s0086 Marchantia polymorpha HOM05D009481 ORTHO05D011450 1.8e-07 58.5 52 55.8
Lalb_Chr22g0351151 Lupinus albus HOM05D009481 ORTHO05D011450 1.2e-06 55.8 51 54.9
Os06g0143100 Oryza sativa ssp. japonica HOM05D009481 ORTHO05D011450 2.6e-06 54.7 33 66.7
Gohir.D05G022201 Gossypium hirsutum HOM05D027988 ORTHO05D011450 4.5e-06 53.9 46 58.7
Gorai.009G022500 Gossypium raimondii HOM05D027988 ORTHO05D011450 4.5e-06 53.9 46 58.7
Potri.001G177366 Populus trichocarpa HOM05D039528 ORTHO05D036632 1.0e-05 52.8 61 45.9


User provided reference genes

Program Settings