Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010240 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.6e-61 239.2 114 100.0
CSS0006887 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.3e-51 204.9 114 83.3
CSS0003221 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.9e-49 196.8 114 80.7
CSS0013543 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 9.8e-48 193.4 114 79.8
CSS0015259 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.4e-46 188.7 118 77.1
CSS0004806 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.2e-46 188.3 114 77.2
CSS0023820 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.1e-46 188.0 114 76.3
CSS0002147 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 7.0e-46 187.2 114 77.2
CSS0023038 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.6e-42 174.9 116 74.1
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 5.2e-33 144.4 109 57.8
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 6.8e-33 144.1 109 57.8
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.7e-31 139.4 112 56.2
CSS0009299 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.2e-31 139.0 112 56.2
CSS0037267 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.1e-30 136.7 112 56.2
CSS0004654 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.2e-29 133.3 112 53.6
CSS0016602 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.1e-29 132.5 111 55.9
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 1.3e-28 129.8 109 54.1
CSS0030203 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.5e-27 126.3 109 55.0
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 3.3e-27 125.2 108 55.6
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 4.3e-27 124.8 94 60.6
CSS0014323 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.6e-26 122.9 109 52.3
CSS0019902 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.6e-26 122.9 109 53.2
CSS0013856 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.9e-25 117.1 106 50.9
Hma1.2p1_0622F.1_g190870 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 8.9e-25 117.1 109 50.5
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.6e-24 115.5 109 50.5
Rhsim01G0176400 Rhododendron simsii HOM05D003216 ORTHO05D002268 3.8e-23 111.7 114 45.6
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 3.8e-23 111.7 114 45.6
CANSAT54G0060 Cannabis sativa HOM05D003216 ORTHO05D002268 8.4e-23 110.5 109 42.2
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 7.1e-22 107.5 97 52.6
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 9.3e-22 107.1 97 51.5
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 2.1e-21 105.9 110 45.5
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 2.1e-21 105.9 110 45.5
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 3.5e-21 105.1 97 51.5
Hma1.2p1_1172F.1_g263670 Hydrangea macrophylla HOM05D000593 ORTHO05D002268 7.8e-21 104.0 113 46.9
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.0e-20 102.1 109 47.7
Atru.chr1.3004 Acer truncatum HOM05D000593 ORTHO05D002268 3.9e-20 101.7 109 45.0
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 1.9e-19 99.4 105 43.8
CSS0005100 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.5e-19 99.0 109 46.8
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 9.6e-19 97.1 117 45.3
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 1.6e-18 96.3 94 50.0
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 2.8e-18 95.5 109 43.1
Lj6A78T35 Lonicera japonica HOM05D000011 ORTHO05D002639 1.8e-17 92.8 104 43.3
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 2.4e-17 92.4 94 47.9
CANSAT01G1396 Cannabis sativa HOM05D000593 ORTHO05D000562 2.6e-16 89.0 71 53.5
TWI75G1634 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 2.6e-16 89.0 110 35.5
TWI53G1229 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.4e-16 88.6 97 40.2
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.5e-16 88.2 93 41.9
TWI75G1234 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.5e-16 88.2 111 33.3
TWI15G1236 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.6e-16 87.4 95 40.0
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.9e-15 85.5 96 39.6
TWI73G0077 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.8e-15 85.1 107 37.4
FvH4_5g13892 Fragaria vesca HOM05D000593 ORTHO05D002268 4.9e-15 84.7 98 45.9
TWI63G1264 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.9e-15 84.7 110 37.3
TWI38G0080 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.4e-15 84.3 91 38.5
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 8.4e-15 84.0 97 41.2
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 8.4e-15 84.0 97 41.2
TWI56G1292 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 8.4e-15 84.0 110 34.5
vmacro14527 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 1.1e-14 83.6 99 46.5
vmacro21289 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 1.1e-14 83.6 99 46.5
TWI63G0793 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.4e-14 82.4 110 36.4
TWI75G0671 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.4e-14 82.4 110 36.4
RcHm_v2.0_Chr7g0206281 Rosa chinensis HOM05D000593 ORTHO05D002268 1.2e-13 80.1 75 50.7
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 2.1e-13 79.3 95 43.2
TWI15G0761 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.7e-13 79.0 71 50.7
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 7.9e-13 77.4 95 41.1
Aqoxy1G00859 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 3.9e-12 75.1 102 36.3
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 3.9e-12 75.1 102 36.3
TWI63G0981 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 5.1e-12 74.7 110 33.6
FvH4_4g16652 Fragaria vesca HOM05D000593 ORTHO05D000562 2.5e-11 72.4 114 32.5
TWI12G0364 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.5e-11 72.4 86 40.7
TWI74G1657 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.3e-11 72.0 91 37.4
Ca_13826_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 4.3e-11 71.6 71 49.3
TPR.G40224 Trifolium pratense HOM05D003216 ORTHO05D002268 1.3e-10 70.1 93 40.9
PSO190G0002 Papaver somniferum HOM05D013875 ORTHO05D002268 1.6e-10 69.7 97 36.1
PSO601G0026 Papaver somniferum HOM05D013875 ORTHO05D002268 1.6e-10 69.7 97 36.1
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.6e-10 69.7 93 36.6
PSO729G0107 Papaver somniferum HOM05D013875 ORTHO05D002268 2.1e-10 69.3 97 36.1
TWI31G0828 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.1e-10 69.3 93 37.6
EL10Ac9g21154 Beta vulgaris HOM05D000593 ORTHO05D000562 3.6e-10 68.6 99 37.4
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 3.6e-10 68.6 90 40.0
TWI59G1482 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.6e-10 68.6 93 37.6
FvH4_6g12551 Fragaria vesca HOM05D000593 ORTHO05D002268 6.2e-10 67.8 114 35.1
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 6.2e-10 67.8 57 52.6
TWI31G0510 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.1e-09 67.0 81 40.7
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 1.4e-09 66.6 122 36.1
FvH4_6g38841 Fragaria vesca HOM05D003216 ORTHO05D002268 1.4e-09 66.6 104 35.6
TWI23G0100 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.4e-09 66.6 93 36.6
FvH4_6g23211 Fragaria vesca HOM05D000045 ORTHO05D009940 1.8e-09 66.2 118 34.7
TWI32G0254 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.8e-09 66.2 94 31.9
TWI09G0326 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.4e-09 65.9 87 34.5
HanXRQChr08g0232231 Helianthus annuus HOM05D000593 ORTHO05D000562 3.1e-09 65.5 109 30.3
HanXRQChr13g0412791 Helianthus annuus HOM05D000593 ORTHO05D000562 3.1e-09 65.5 109 30.3
HanXRQChr15g0467831 Helianthus annuus HOM05D000593 ORTHO05D000562 3.1e-09 65.5 109 30.3
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.0e-09 65.1 58 46.6
FvH4_7g19111 Fragaria vesca HOM05D000593 ORTHO05D002268 4.0e-09 65.1 118 33.9
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 5.3e-09 64.7 58 44.8
FvH4_5g20623 Fragaria vesca HOM05D000593 ORTHO05D000562 5.3e-09 64.7 125 34.4
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 6.9e-09 64.3 58 46.6
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 6.9e-09 64.3 94 36.2
TWI81G0406 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 6.9e-09 64.3 93 36.6
Ca_14497_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.5e-08 63.2 94 33.0
TWI38G1252 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.5e-08 63.2 93 36.6
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.6e-08 62.4 59 45.8
TWI31G0531 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.6e-08 62.4 82 40.2
HanXRQChr17g0552941 Helianthus annuus HOM05D000593 ORTHO05D000562 3.4e-08 62.0 99 30.3
HanXRQChr05g0151291 Helianthus annuus HOM05D000593 ORTHO05D000562 4.5e-08 61.6 99 30.3
SGA_v2.0_scaffold106G30618 Striga asiatica HOM05D000593 ORTHO05D002268 4.5e-08 61.6 95 36.8
SGA_v2.0_scaffold126G33866 Striga asiatica HOM05D000593 ORTHO05D002268 4.5e-08 61.6 95 36.8
SGA_v2.0_scaffold17G08149 Striga asiatica HOM05D000593 ORTHO05D002268 4.5e-08 61.6 95 36.8
SGA_v2.0_scaffold1G00721 Striga asiatica HOM05D000593 ORTHO05D002268 4.5e-08 61.6 95 36.8
SGA_v2.0_scaffold22G09752 Striga asiatica HOM05D000593 ORTHO05D002268 4.5e-08 61.6 95 36.8
SGA_v2.0_scaffold286G47098 Striga asiatica HOM05D000164 ORTHO05D000096 4.5e-08 61.6 95 36.8
SGA_v2.0_scaffold31G12776 Striga asiatica HOM05D000593 ORTHO05D002268 4.5e-08 61.6 95 36.8
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 4.5e-08 61.6 95 36.8
TWI81G0284 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 4.5e-08 61.6 76 42.1
TWI59G0546 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.8e-08 61.2 67 44.8
TWI59G1088 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 7.6e-08 60.8 75 36.0
Oeu028054.1 Olea europaea HOM05D000593 ORTHO05D002268 2.2e-07 59.3 54 48.1
TWI73G0096 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.2e-07 59.3 97 32.0
vmacro11426 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 2.2e-07 59.3 82 35.4
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 2.9e-07 58.9 98 31.6
Medtr8g020437 Medicago truncatula HOM05D003216 ORTHO05D002268 2.9e-07 58.9 98 30.6
TWI38G0853 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.9e-07 58.9 59 42.4
Oeu064531.1 Olea europaea HOM05D000593 ORTHO05D002268 3.8e-07 58.5 56 51.8
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 4.9e-07 58.2 53 52.8
Medtr1g051465 Medicago truncatula HOM05D003216 ORTHO05D002268 4.9e-07 58.2 97 32.0
Medtr7g029645 Medicago truncatula HOM05D003216 ORTHO05D002268 6.4e-07 57.8 100 31.0
CSS0040938 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 8.4e-07 57.4 58 44.8
Ca_11017_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.4e-06 56.6 95 33.7
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 1.9e-06 56.2 55 49.1
Aqoxy1G03120 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.9e-06 56.2 109 28.4
CSS0003309 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.9e-06 56.2 58 43.1
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.9e-06 56.2 114 32.5
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-06 56.2 100 30.0
PSO339G0458 Papaver somniferum HOM05D000593 ORTHO05D002268 1.9e-06 56.2 93 31.2
CSS0038609 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.4e-06 55.8 64 39.1
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 2.4e-06 55.8 90 33.3
Ca_14741_v3 Cicer arietinum L. HOM05D003326 ORTHO05D001185 2.4e-06 55.8 90 33.3
Ca_25321_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 2.4e-06 55.8 97 30.9
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 2.4e-06 55.8 98 28.6
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 3.2e-06 55.5 53 52.8
Medtr1g016820 Medicago truncatula HOM05D003216 ORTHO05D002268 3.2e-06 55.5 98 28.6
Medtr1g036180 Medicago truncatula HOM05D003216 ORTHO05D002268 3.2e-06 55.5 93 34.4
TWI36G1645 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.2e-06 55.5 72 43.1
Gorai.006G065500 Gossypium raimondii HOM05D000593 ORTHO05D000562 4.2e-06 55.1 99 30.3
Medtr1g035110 Medicago truncatula HOM05D003216 ORTHO05D002268 4.2e-06 55.1 98 28.6
FAN12G0941 Fragaria x ananassa HOM05D000593 ORTHO05D002268 5.5e-06 54.7 65 43.1
TWI56G0917 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.5e-06 54.7 60 48.3
Aqoxy3G00378 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 7.1e-06 54.3 68 42.6
Aqoxy7G02090 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 7.1e-06 54.3 73 35.6
ECA247G1059 Erigeron canadensis HOM05D000593 ORTHO05D002268 7.1e-06 54.3 101 37.6
TPR.G20359 Trifolium pratense HOM05D003216 ORTHO05D002268 7.1e-06 54.3 103 33.0
TWI81G0336 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 9.3e-06 53.9 76 38.2


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