Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010221 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D020238 1.9e-67 259.2 148 100.0
CSS0014280 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D024710 2.9e-31 139.0 148 55.4
CSS0013580 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.9e-28 128.6 162 54.3
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-27 127.1 162 53.7
CSS0017473 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-27 127.1 162 53.7
CSS0021320 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-27 127.1 162 53.7
CSS0050513 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-27 127.1 162 53.7
CSS0004257 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.9e-27 126.3 162 53.7
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.3e-27 125.6 162 53.1
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.3e-27 125.2 162 53.1
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.3e-27 125.2 162 53.1
CSS0023792 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.5e-27 124.0 162 55.6
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.5e-24 114.4 132 54.5
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.5e-24 114.4 132 54.5
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 3.9e-20 102.1 160 41.2
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 3.9e-20 102.1 160 41.2
CSS0038450 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.5e-19 99.4 101 56.4
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 8.9e-17 90.9 114 45.6
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 1.2e-16 90.5 140 38.6
Rhsim12G0116000 Rhododendron simsii HOM05D028291 ORTHO05D020238 3.5e-13 79.0 135 37.8
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-13 78.2 142 47.9
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-13 78.2 142 47.9
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-13 78.2 142 47.9
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-13 78.2 142 47.9
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-13 78.2 142 47.9
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-13 78.2 142 47.9
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-13 78.2 142 47.9
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.7e-12 76.6 142 47.9
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.3e-12 76.3 145 37.2
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-12 75.9 144 45.1
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 8.6e-12 74.3 155 39.4
Ciclev10033751m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.5e-11 73.6 125 38.4
Rhsim04G0125600 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.6e-11 71.6 145 35.9
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.6e-11 71.6 142 37.3
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.6e-11 71.6 142 37.3
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.8e-09 66.6 138 41.3
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.0e-09 65.5 143 43.4
Rhsim07G0156400 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.2e-09 65.1 106 38.7
CSS0010831 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-08 63.9 80 43.8
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 9.9e-08 60.8 144 31.9
Haze_08540 Corylus avellana HOM05D058381 ORTHO05D020238 1.3e-07 60.5 135 40.7
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 1.1e-06 57.4 136 28.7
Haze_00879 Corylus avellana HOM05D001311 ORTHO05D001204 3.2e-06 55.8 134 38.1
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 3.2e-06 55.8 163 30.1
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 4.2e-06 55.5 138 39.1
Haze_20407 Corylus avellana HOM05D058381 ORTHO05D020238 4.2e-06 55.5 133 38.3
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.2e-06 55.5 144 30.6
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 7.1e-06 54.7 138 35.5


User provided reference genes

Program Settings