Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010187 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 1.1e-175 619.8 306 100.0
Rhsim08G0222000 Rhododendron simsii HOM05D006908 ORTHO05D008662 2.0e-132 476.1 311 77.5
Actinidia01807 Actinidia chinensis HOM05D006908 ORTHO05D008662 2.3e-131 472.6 293 81.9
Dinv38042 Davidia involucrata HOM05D006908 ORTHO05D008662 1.1e-125 453.8 294 77.2
vmacro18903 Vaccinium macrocarpon HOM05D006908 ORTHO05D008662 2.0e-124 449.5 348 68.1
Hma1.2p1_0323F.1_g125120 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 2.4e-117 426.0 291 71.1
Lj5C59T9 Lonicera japonica HOM05D006908 ORTHO05D008662 2.9e-110 402.5 274 71.2
Atru.chr1.3281 Acer truncatum HOM05D006908 ORTHO05D008662 1.9e-109 399.8 293 66.6
QL05p023344 Quercus lobata HOM05D006908 ORTHO05D008662 2.7e-108 396.0 284 67.6
GSVIVG01017098001 Vitis vinifera HOM05D006908 ORTHO05D008662 1.2e-105 387.1 279 69.5
Haze_16403 Corylus avellana HOM05D006908 ORTHO05D008662 2.1e-105 386.3 287 66.9
CiPaw.01G238600 Carya illinoinensis HOM05D006908 ORTHO05D008662 6.8e-104 381.3 281 67.3
Oeu063957.2 Olea europaea HOM05D006908 ORTHO05D008662 7.5e-103 377.9 285 64.9
Nn8g39204 Nelumbo nucifera HOM05D006908 ORTHO05D008662 2.9e-102 375.9 289 67.8
MD17G1194300 Malus domestica HOM05D006908 ORTHO05D008662 3.7e-102 375.6 282 67.0
Thecc.06G089400 Theobroma cacao HOM05D006908 ORTHO05D008662 1.4e-101 373.6 284 63.0
PSO782G4818 Papaver somniferum HOM05D006908 ORTHO05D008662 3.2e-101 372.5 271 67.5
PGSC0003DMG400005687 Solanum tuberosum HOM05D006908 ORTHO05D008662 7.1e-101 371.3 282 64.9
CSS0029579 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 9.2e-101 370.9 185 97.3
DCAR_023055 Daucus carota HOM05D006908 ORTHO05D008662 9.2e-101 370.9 295 64.4
Sopen03g039000 Solanum pennellii HOM05D006908 ORTHO05D008662 1.2e-100 370.5 289 63.3
CANSAT56G3342 Cannabis sativa HOM05D006908 ORTHO05D008662 1.6e-100 370.2 279 63.8
CAN.G438.72 Capsicum annuum HOM05D006908 ORTHO05D008662 2.1e-100 369.8 281 65.5
TAR626G0624 Trochodendron aralioides HOM05D006908 ORTHO05D008662 1.3e-99 367.1 309 62.1
MSTRG.11073 Avicennia marina HOM05D006908 ORTHO05D008662 2.3e-99 366.3 276 66.3
COL.COLO4_30388 Corchorus olitorius HOM05D006908 ORTHO05D008662 2.3e-99 366.3 287 62.0
Sabra01G0145800 Salix brachista HOM05D006908 ORTHO05D008662 2.3e-99 366.3 286 64.7
Cc04_g03340 Coffea canephora HOM05D006908 ORTHO05D008662 1.5e-98 363.6 291 62.5
Gorai.006G098400 Gossypium raimondii HOM05D006908 ORTHO05D008662 4.3e-98 362.1 281 61.9
Nitab4.5_0002308g0060 Nicotiana tabacum HOM05D006908 ORTHO05D008662 4.3e-98 362.1 285 63.5
Duzib160G0703 Durio zibethinus HOM05D006908 ORTHO05D008662 6.2e-97 358.2 286 61.2
Sc10g0007370 Simmondsia chinensis HOM05D006908 ORTHO05D008662 6.8e-96 354.8 293 60.1
RcHm_v2.0_Chr2g0138011 Rosa chinensis HOM05D006908 ORTHO05D008662 2.0e-95 353.2 298 59.1
ECA247G1365 Erigeron canadensis HOM05D006908 ORTHO05D008662 2.6e-95 352.8 292 63.4
Lj3g0017668 Lotus japonicus HOM05D006908 ORTHO05D008662 2.6e-95 352.8 286 60.1
Lalb_Chr22g0351301 Lupinus albus HOM05D006908 ORTHO05D008662 3.4e-95 352.4 271 62.7
Prupe.3G070300 Prunus persica HOM05D006908 ORTHO05D008662 5.8e-95 351.7 288 62.8
SalBow2G2262 Salvia bowleyana HOM05D006908 ORTHO05D008662 5.8e-95 351.7 266 63.9
HanXRQChr02g0032801 Helianthus annuus HOM05D006908 ORTHO05D008662 9.9e-95 350.9 294 62.2
Ciclev10025928m.g Citrus clementina HOM05D006908 ORTHO05D008662 1.3e-94 350.5 300 59.7
FAN09G3067 Fragaria x ananassa HOM05D006908 ORTHO05D008662 4.9e-94 348.6 299 58.9
FAN05G1986 Fragaria x ananassa HOM05D006908 ORTHO05D008662 6.4e-94 348.2 299 58.5
PSO063G2605 Papaver somniferum HOM05D006908 ORTHO05D008662 3.2e-93 345.9 269 64.7
PGR102G2040 Punica granatum HOM05D006908 ORTHO05D008662 1.2e-92 344.0 280 59.3
FvH4_6g31280 Fragaria vesca HOM05D006908 ORTHO05D008662 1.6e-92 343.6 290 58.6
EL10Ac9g22006 Beta vulgaris HOM05D006908 ORTHO05D008662 2.7e-92 342.8 283 61.5
VMungo1080G1808 Vigna mungo HOM05D006908 ORTHO05D008662 1.0e-91 340.9 272 62.5
Eucgr.J02986 Eucalyptus grandis HOM05D006908 ORTHO05D008662 1.3e-91 340.5 287 59.9
Migut.I00872 Erythranthe guttata HOM05D006908 ORTHO05D008662 2.3e-91 339.7 279 60.2
Phvul.005G170700 Phaseolus vulgaris HOM05D006908 ORTHO05D008662 3.9e-91 339.0 284 60.2
Ca_01120_v3 Cicer arietinum L. HOM05D006908 ORTHO05D008662 8.7e-91 337.8 285 58.6
Medtr2g102040 Medicago truncatula HOM05D006908 ORTHO05D008662 1.1e-90 337.4 285 58.2
TPR.G37174 Trifolium pratense HOM05D006908 ORTHO05D008662 1.9e-90 336.7 272 59.9
Solyc03g120130.4 Solanum lycopersicum HOM05D006908 ORTHO05D008662 2.5e-90 336.3 286 59.4
Glyma.15G014900 Glycine max HOM05D006908 ORTHO05D008662 3.3e-90 335.9 269 61.7
ClCG07G013040 Citrullus lanatus HOM05D006908 ORTHO05D008662 4.7e-89 332.0 294 58.8
Manes.11G045900 Manihot esculenta HOM05D006908 ORTHO05D008662 8.1e-89 331.3 252 65.9
MELO3C012958.2 Cucumis melo HOM05D006908 ORTHO05D008662 3.1e-88 329.3 288 59.7
Ah.01g005440 Amaranthus hybridus HOM05D006908 ORTHO05D008662 4.0e-88 328.9 286 58.4
CsaV3_3G025130 Cucumis sativus L. HOM05D006908 ORTHO05D008662 1.2e-87 327.4 288 59.0
arahy.Tifrunner.gnm1.ann1.0IDI1A Arachis hypogaea HOM05D006908 ORTHO05D008662 2.0e-87 326.6 278 58.3
arahy.Tifrunner.gnm1.ann1.UK934I Arachis hypogaea HOM05D006908 ORTHO05D008662 2.0e-87 326.6 278 58.3
Gohir.D09G082700 Gossypium hirsutum HOM05D006908 ORTHO05D008662 4.4e-87 325.5 281 57.7
CDE02G0011 Ceratophyllum demersum HOM05D006908 ORTHO05D008662 9.9e-87 324.3 282 58.9
Psat5g298720 Pisum sativum HOM05D006908 ORTHO05D008662 3.8e-86 322.4 289 55.4
Hund06614 Selenicereus undatus HOM05D006908 ORTHO05D008662 3.8e-86 322.4 266 61.7
AUR62042927 Chenopodium quinoa HOM05D006908 ORTHO05D008662 1.1e-85 320.9 308 55.5
Nitab4.5_0000671g0150 Nicotiana tabacum HOM05D006908 ORTHO05D008662 1.9e-85 320.1 289 57.4
Hma1.2p1_0323F.1_g125130 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 3.2e-85 319.3 291 58.8
Sed0021689 Sechium edule HOM05D006908 ORTHO05D008662 9.3e-85 317.8 276 60.5
Sp5g35850 Schrenkiella parvula HOM05D006908 ORTHO05D008662 6.0e-84 315.1 269 58.7
AUR62016450 Chenopodium quinoa HOM05D006908 ORTHO05D008662 2.5e-82 309.7 308 54.2
TWI75G1463 Tripterygium wilfordii HOM05D006908 ORTHO05D008662 2.5e-82 309.7 233 65.7
Aqoxy7G01689 Aquilegia oxysepala HOM05D006908 ORTHO05D008662 4.3e-82 308.9 283 58.3
Peaxi162Scf00015g00453 Petunia axillaris HOM05D006908 ORTHO05D008662 8.1e-81 304.7 287 54.7
HPP92_003725 Vanilla planifolia HOM05D006908 ORTHO05D008662 5.3e-80 302.0 276 54.0
Aa31LG4G230 Aethionema arabicum HOM05D006908 ORTHO05D008662 1.2e-79 300.8 308 52.3
Potri.001G181200 Populus trichocarpa HOM05D006908 ORTHO05D008662 2.0e-79 300.1 242 62.8
Zm00001eb275430 Zea mays HOM05D006908 ORTHO05D008662 3.4e-79 299.3 271 55.0
Carub.0002s2758 Capsella rubella HOM05D006908 ORTHO05D008662 9.9e-79 297.7 274 54.7
BcaC08g47592 Brassica carinata HOM05D002960 ORTHO05D003632 2.9e-78 296.2 281 54.1
Gohir.A09G082800 Gossypium hirsutum HOM05D006908 ORTHO05D008662 4.9e-78 295.4 272 55.9
Os06g0639300 Oryza sativa ssp. japonica HOM05D006908 ORTHO05D008662 4.9e-78 295.4 271 55.0
BcaC08g47561 Brassica carinata HOM05D006908 ORTHO05D008662 8.4e-78 294.7 272 55.5
Thhalv10018901m.g Eutrema salsugineum HOM05D006908 ORTHO05D008662 1.4e-77 293.9 275 55.6
CARHR074570 Cardamine hirsuta HOM05D006908 ORTHO05D008662 9.3e-77 291.2 279 54.5
Cpa.g.sc0.185 Carica papaya HOM05D006908 ORTHO05D008662 1.2e-76 290.8 216 67.6
unitig_52.g17450 Utricularia gibba HOM05D006908 ORTHO05D008662 2.7e-76 289.7 296 52.0
AT1G79915 Arabidopsis thaliana HOM05D006908 ORTHO05D008662 1.0e-75 287.7 270 54.4
THA.LOC104812520 Tarenaya hassleriana HOM05D006908 ORTHO05D008662 1.8e-75 287.0 309 49.2
ATR0602G186 Amborella trichopoda HOM05D006908 ORTHO05D008662 2.5e-74 283.1 244 53.7
MBI15_g13424_MAGBIO Magnolia biondii HOM05D006908 ORTHO05D008662 2.5e-74 283.1 271 57.2
C06p54330 Brassica napus HOM05D002960 ORTHO05D003632 5.6e-74 282.0 307 49.5
BolC6t40444H Brassica oleracea HOM05D002960 ORTHO05D003632 5.6e-74 282.0 307 49.5
SHI10939 Sapria himalayana HOM05D006908 ORTHO05D008662 3.7e-73 279.3 247 57.5
BraA07t32051Z Brassica rapa HOM05D006908 ORTHO05D008662 1.5e-71 273.9 282 52.5
SEGI_13943 Sequoiadendron giganteum HOM05D006908 ORTHO05D008662 4.9e-70 268.9 289 47.4
Cfa002075 Carpinus fangiana HOM05D006908 ORTHO05D008662 1.3e-65 254.2 201 65.2
Lsat_1_v5_gn_1_35121 Lactuca sativa HOM05D006908 ORTHO05D008662 2.1e-60 236.9 221 58.4
A07p45490 Brassica napus HOM05D006908 ORTHO05D008662 2.7e-60 236.5 327 44.0
Mapoly0072s0004 Marchantia polymorpha HOM05D006908 ORTHO05D008662 7.4e-58 228.4 276 42.8
Pp3c16_8290 Physcomitrium patens HOM05D006908 ORTHO05D008662 9.0e-56 221.5 288 39.9
AagrBONN_evm.TU.Sc2ySwM_344.5185 Anthoceros agrestis HOM05D006908 ORTHO05D008662 4.5e-55 219.2 272 44.5
AUR62033073 Chenopodium quinoa HOM05D006908 ORTHO05D008662 5.0e-54 215.7 246 48.4
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 5.1e-51 205.7 310 38.4
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 1.8e-48 197.2 265 43.8
FAN02G3381 Fragaria x ananassa HOM05D006908 ORTHO05D008662 5.9e-47 192.2 227 46.7
C09p24020 Brassica napus HOM05D006908 ORTHO05D008662 8.5e-38 161.8 185 48.1
SMO347G0515 Selaginella moellendorffii HOM05D006908 ORTHO05D008662 1.9e-29 134.0 158 43.7
Actinidia32749 Actinidia chinensis HOM05D006908 ORTHO05D008662 5.2e-27 125.9 255 36.1
SGA_v2.0_scaffold37G14828 Striga asiatica HOM05D006908 ORTHO05D008662 1.5e-26 124.4 91 67.0
Cpa.g.sc41.12 Carica papaya HOM05D006908 ORTHO05D008662 1.7e-25 120.9 88 64.8
AL2G41640 Arabidopsis lyrata HOM05D006908 ORTHO05D008662 2.2e-22 110.5 157 42.0
BolC9t55322H Brassica oleracea HOM05D006908 ORTHO05D008662 4.2e-21 106.3 93 58.1
Cpa.g.sc41.11 Carica papaya HOM05D006908 ORTHO05D008662 2.0e-07 60.8 43 60.5
TWI31G0384 Tripterygium wilfordii HOM05D002956 ORTHO05D008031 1.0e-06 58.5 214 25.7
Potri.009G068400 Populus trichocarpa HOM05D002956 ORTHO05D008031 1.3e-06 58.2 182 27.5
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 1.7e-06 57.8 164 28.7
Os07g0641600 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D008031 5.0e-06 56.2 154 24.0
Pp3c3_3430 Physcomitrium patens HOM05D002956 ORTHO05D008031 5.0e-06 56.2 173 28.3
Gohir.A07G121300 Gossypium hirsutum HOM05D002956 ORTHO05D008031 6.6e-06 55.8 195 23.6
EL10Ac6g15168 Beta vulgaris HOM05D006745 ORTHO05D008449 8.6e-06 55.5 236 25.0
Cpa.g.c43825 Carica papaya HOM05D006908 ORTHO05D008662 8.6e-06 55.5 33 75.8


User provided reference genes

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