Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.1e-43 179.5 86 100.0
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 5.7e-32 140.6 79 86.1
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 9.7e-32 139.8 78 84.6
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 8.2e-31 136.7 78 84.6
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 1.2e-29 132.9 78 80.8
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 1.2e-29 132.9 78 79.5
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 1.2e-29 132.9 78 79.5
CSS0002634 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 2.0e-29 132.1 64 98.4
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 2.6e-29 131.7 78 80.8
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 3.5e-29 131.3 78 80.8
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 1.3e-28 129.4 78 82.1
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 1.3e-28 129.4 78 80.8
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 1.3e-28 129.4 78 78.2
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.7e-28 129.0 79 81.0
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.7e-28 129.0 79 81.0
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.7e-28 129.0 79 81.0
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.7e-28 129.0 79 81.0
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 3.8e-28 127.9 78 75.6
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 3.8e-28 127.9 78 78.2
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 6.5e-28 127.1 78 78.2
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 6.5e-28 127.1 78 76.9
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 6.5e-28 127.1 78 76.9
Sopen12g011340 Solanum pennellii HOM05D005766 ORTHO05D007002 6.5e-28 127.1 78 78.2
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 1.1e-27 126.3 79 79.7
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 1.5e-27 125.9 78 75.6
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 1.5e-27 125.9 78 76.9
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 1.5e-27 125.9 78 75.6
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 1.9e-27 125.6 78 75.6
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 1.9e-27 125.6 77 77.9
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 4.2e-27 124.4 77 77.9
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 4.2e-27 124.4 78 76.9
Sc13g0009380 Simmondsia chinensis HOM05D005766 ORTHO05D007002 4.2e-27 124.4 78 76.9
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 5.5e-27 124.0 78 75.6
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 5.5e-27 124.0 78 76.9
Actinidia08608 Actinidia chinensis HOM05D005766 ORTHO05D007002 9.4e-27 123.2 66 86.4
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 9.4e-27 123.2 67 85.1
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 9.4e-27 123.2 67 85.1
Nitab4.5_0014657g0010 Nicotiana tabacum HOM05D005766 ORTHO05D007002 9.4e-27 123.2 76 77.6
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 1.6e-26 122.5 78 74.4
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 3.6e-26 121.3 67 83.6
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 6.1e-26 120.6 78 74.4
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 1.4e-25 119.4 67 80.6
Peaxi162Scf00023g00720 Petunia axillaris HOM05D005766 ORTHO05D007002 1.8e-25 119.0 78 71.8
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 2.3e-25 118.6 78 75.6
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 2.3e-25 118.6 77 76.6
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 5.2e-25 117.5 79 73.4
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 8.8e-25 116.7 76 76.3
EL10Ac3g05375 Beta vulgaris HOM05D005766 ORTHO05D007002 1.2e-24 116.3 78 70.5
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 1.2e-24 116.3 75 74.7
Medtr1g099380 Medicago truncatula HOM05D005766 ORTHO05D007002 1.2e-24 116.3 77 70.1
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 1.5e-24 115.9 79 72.2
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 1.5e-24 115.9 79 72.2
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 1.5e-24 115.9 78 67.9
HPP92_022503 Vanilla planifolia HOM05D005766 ORTHO05D007002 1.5e-24 115.9 78 69.2
Psat6g194920 Pisum sativum HOM05D005766 ORTHO05D007002 2.0e-24 115.5 79 70.9
Oeu003335.2 Olea europaea HOM05D005766 ORTHO05D007002 3.3e-24 114.8 82 68.3
Cfa000854 Carpinus fangiana HOM05D005766 ORTHO05D007002 4.4e-24 114.4 71 77.5
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 7.5e-24 113.6 67 79.1
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 7.5e-24 113.6 79 70.9
Lalb_Chr06g0161411 Lupinus albus HOM05D005766 ORTHO05D007002 1.3e-23 112.8 79 70.9
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 1.7e-23 112.5 78 69.2
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 3.7e-23 111.3 74 70.3
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 4.8e-23 110.9 78 69.2
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 4.8e-23 110.9 79 69.6
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 1.8e-22 109.0 79 68.4
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 1.8e-22 109.0 140 47.9
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 1.2e-21 106.3 78 65.4
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 2.7e-21 105.1 75 65.3
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 1.7e-20 102.4 82 65.9
Atru.chr1.315 Acer truncatum HOM05D005766 ORTHO05D007002 1.2e-18 96.3 78 64.1
TWI39G0059 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 3.0e-17 91.7 57 77.2
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 6.8e-17 90.5 82 56.1
CSS0038194 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.2e-16 89.7 43 97.7
CSS0035081 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 4.4e-16 87.8 43 95.3
CSS0045499 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.7e-15 85.9 43 93.0
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 2.2e-15 85.5 77 54.5
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 3.1e-14 81.6 56 69.6
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 1.6e-10 69.3 67 47.8
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 3.6e-10 68.2 65 47.7
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 7.5e-08 60.5 37 81.1
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 8.3e-07 57.0 38 76.3
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 2.4e-06 55.5 37 73.0
vmacro06124 Vaccinium macrocarpon HOM05D006783 ORTHO05D008330 5.4e-06 54.3 28 82.1


User provided reference genes

Program Settings