Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 3.3e-39 164.5 77 100.0
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.6e-38 162.2 77 98.7
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 3.4e-28 127.9 67 86.6
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 5.8e-28 127.1 67 86.6
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.3e-27 125.9 67 86.6
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 1.7e-27 125.6 67 85.1
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 2.9e-27 124.8 67 83.6
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 1.1e-26 122.9 67 82.1
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 1.4e-26 122.5 67 83.6
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 1.9e-26 122.1 67 82.1
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 7.1e-26 120.2 67 80.6
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 9.3e-26 119.8 67 80.6
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 1.6e-25 119.0 67 80.6
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 2.7e-25 118.2 67 79.1
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 3.5e-25 117.9 67 79.1
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 3.5e-25 117.9 67 76.1
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 6.0e-25 117.1 67 77.6
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 7.9e-25 116.7 67 77.6
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 7.9e-25 116.7 67 79.1
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 1.0e-24 116.3 67 77.6
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 1.3e-24 115.9 67 79.1
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 1.3e-24 115.9 67 76.1
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 1.8e-24 115.5 67 76.1
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 2.3e-24 115.2 68 79.4
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 2.3e-24 115.2 67 79.1
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 3.0e-24 114.8 76 69.7
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 3.0e-24 114.8 67 74.6
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 3.0e-24 114.8 67 74.6
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 3.0e-24 114.8 67 74.6
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 3.0e-24 114.8 67 74.6
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 3.0e-24 114.8 67 74.6
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 3.0e-24 114.8 67 77.6
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 5.1e-24 114.0 67 76.1
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 6.7e-24 113.6 68 76.5
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 8.7e-24 113.2 67 73.1
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 8.7e-24 113.2 67 74.6
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.1e-23 112.8 67 76.1
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 1.1e-23 112.8 67 76.1
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 1.5e-23 112.5 78 70.5
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 1.5e-23 112.5 71 74.6
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.9e-23 112.1 67 73.1
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 1.9e-23 112.1 67 77.6
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 1.9e-23 112.1 67 74.6
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 2.5e-23 111.7 67 74.6
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 3.3e-23 111.3 67 73.1
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 3.3e-23 111.3 67 76.1
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 4.3e-23 110.9 67 73.1
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 5.7e-23 110.5 69 69.6
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 5.7e-23 110.5 67 73.1
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 7.4e-23 110.2 65 75.4
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 7.4e-23 110.2 67 70.1
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 1.3e-22 109.4 67 74.6
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 2.1e-22 108.6 67 70.1
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 2.1e-22 108.6 67 71.6
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 2.8e-22 108.2 67 70.1
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 2.8e-22 108.2 67 71.6
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 4.8e-22 107.5 66 69.7
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 4.8e-22 107.5 66 69.7
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 4.8e-22 107.5 66 71.2
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 8.2e-22 106.7 67 71.6
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 1.1e-21 106.3 67 68.7
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 1.4e-21 105.9 67 70.1
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 1.4e-21 105.9 67 68.7
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 1.8e-21 105.5 67 68.7
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 2.4e-21 105.1 68 72.1
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 2.4e-21 105.1 68 72.1
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 2.4e-21 105.1 68 72.1
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 2.4e-21 105.1 66 72.7
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 3.1e-21 104.8 67 70.1
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 4.1e-21 104.4 67 67.2
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 5.3e-21 104.0 67 70.1
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 6.9e-21 103.6 67 68.7
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 2.0e-20 102.1 55 83.6
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 4.5e-20 100.9 82 62.2
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 2.9e-19 98.2 66 63.6
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 3.8e-19 97.8 102 50.0
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 5.0e-19 97.4 67 65.7
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 1.9e-18 95.5 63 61.9
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 3.2e-18 94.7 52 76.9
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 4.2e-18 94.4 67 61.2
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 7.2e-18 93.6 60 66.7
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 2.7e-17 91.7 65 66.2
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 7.9e-17 90.1 67 64.2
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 7.9e-17 90.1 67 64.2
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 7.9e-17 90.1 67 64.2
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 7.9e-17 90.1 67 64.2
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 7.9e-17 90.1 67 64.2
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 7.9e-17 90.1 67 64.2
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 1.3e-16 89.4 73 60.3
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 2.3e-16 88.6 67 59.7
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 3.9e-16 87.8 67 59.7
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 5.1e-16 87.4 67 59.7
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 2.2e-14 82.0 67 59.7
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 3.7e-14 81.3 59 55.9
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 1.8e-13 79.0 59 59.3
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 2.0e-12 75.5 45 75.6
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 2.0e-12 75.5 57 52.6
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 1.4e-10 69.3 52 57.7
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 4.2e-10 67.8 52 59.6
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 2.0e-07 58.9 31 74.2
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 2.8e-06 55.1 60 35.0


User provided reference genes

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