Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 5.1e-108 394.4 201 100.0
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.5e-107 392.9 201 99.5
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.1e-105 384.8 211 94.8
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.1e-105 384.8 211 94.8
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.1e-105 384.8 211 94.8
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 6.9e-105 384.0 211 94.3
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.4e-104 381.7 211 94.3
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.8e-103 378.3 211 93.4
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.8e-98 361.3 202 93.6
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.6e-80 303.1 195 85.1
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 9.5e-46 187.6 185 63.2
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 6.4e-34 148.3 224 47.3
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 3.5e-32 142.5 150 57.3
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 3.9e-31 139.0 131 61.1
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 1.1e-28 131.0 105 69.5
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 1.1e-28 131.0 158 53.8
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 2.4e-28 129.8 111 64.9
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 8.9e-28 127.9 120 62.5
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 2.0e-27 126.7 116 58.6
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 2.6e-27 126.3 148 54.1
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 3.4e-27 125.9 120 62.5
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 3.4e-27 125.9 107 62.6
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 4.4e-27 125.6 100 69.0
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 9.9e-27 124.4 117 59.8
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 1.3e-26 124.0 137 53.3
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.3e-26 124.0 127 58.3
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 2.2e-26 123.2 117 59.0
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 2.2e-26 123.2 110 62.7
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 3.8e-26 122.5 105 65.7
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 8.4e-26 121.3 110 62.7
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 1.6e-24 117.1 157 51.6
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 2.1e-24 116.7 117 60.7
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 2.1e-24 116.7 117 60.7
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 2.7e-24 116.3 117 56.4
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 2.7e-24 116.3 117 55.6
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 6.0e-24 115.2 154 51.9
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 7.8e-24 114.8 117 59.8
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 7.8e-24 114.8 116 56.0
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 1.5e-22 110.5 114 54.4
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 3.6e-21 105.9 117 52.1
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 6.2e-21 105.1 99 59.6
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 8.1e-21 104.8 104 57.7
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 8.1e-21 104.8 115 53.0
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 1.4e-20 104.0 121 52.9
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 1.4e-20 104.0 104 56.7
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 2.4e-20 103.2 104 56.7
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 2.4e-20 103.2 104 56.7
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 2.4e-20 103.2 104 56.7
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 3.1e-20 102.8 117 53.0
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 3.1e-20 102.8 117 53.8
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 5.3e-20 102.1 117 53.0
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 6.9e-20 101.7 104 55.8
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 6.9e-20 101.7 103 57.3
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 6.9e-20 101.7 123 54.5
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 1.2e-19 100.9 106 54.7
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 3.4e-19 99.4 115 51.3
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 5.8e-19 98.6 104 54.8
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 9.9e-19 97.8 117 52.1
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 9.9e-19 97.8 104 58.7
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 8.4e-18 94.7 86 61.6
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 5.4e-17 92.0 127 44.1
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 5.4e-17 92.0 127 44.1
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 5.4e-17 92.0 105 48.6
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 2.3e-15 86.7 228 32.9
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 2.5e-14 83.2 80 57.5
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 1.6e-13 80.5 128 41.4
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 6.2e-13 78.6 50 80.0
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 8.1e-13 78.2 45 80.0
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-11 73.9 99 44.4
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 1.7e-10 70.5 86 54.7
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 3.2e-09 66.2 50 72.0
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 7.4e-06 55.1 100 41.0


User provided reference genes

Program Settings