Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010075 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 6.1e-138 494.2 258 100.0
vmacro03339 Vaccinium macrocarpon HOM05D003653 ORTHO05D004249 3.2e-94 349.0 203 92.1
Actinidia05573 Actinidia chinensis HOM05D003653 ORTHO05D004249 3.5e-93 345.5 203 91.1
Cfa000655 Carpinus fangiana HOM05D003653 ORTHO05D004249 1.0e-92 344.0 202 90.6
GSVIVG01015003001 Vitis vinifera HOM05D003653 ORTHO05D004249 8.6e-92 340.9 203 90.1
CiPaw.07G188300 Carya illinoinensis HOM05D003653 ORTHO05D004249 4.3e-91 338.6 203 88.7
Prupe.7G190900 Prunus persica HOM05D003653 ORTHO05D004249 2.8e-90 335.9 203 88.7
Dinv11396 Davidia involucrata HOM05D003653 ORTHO05D004249 3.6e-90 335.5 203 90.6
QL02p096254 Quercus lobata HOM05D003653 ORTHO05D004249 1.1e-89 334.0 202 88.1
Eucgr.C00763 Eucalyptus grandis HOM05D003653 ORTHO05D004249 3.1e-89 332.4 203 86.2
QL02p096361 Quercus lobata HOM05D003653 ORTHO05D004249 2.0e-88 329.7 202 86.6
Manes.16G089600 Manihot esculenta HOM05D003653 ORTHO05D004249 3.4e-88 328.9 203 88.2
SGA_v2.0_scaffold55G19872 Striga asiatica HOM05D003653 ORTHO05D004249 3.4e-88 328.9 203 86.7
CANSAT56G3945 Cannabis sativa HOM05D003653 ORTHO05D004249 5.8e-88 328.2 203 87.7
CiPaw.08G039100 Carya illinoinensis HOM05D003653 ORTHO05D004249 5.8e-88 328.2 203 85.7
Hma1.2p1_0179F.1_g079140 Hydrangea macrophylla HOM05D003653 ORTHO05D004249 9.9e-88 327.4 203 86.7
Oeu028863.2 Olea europaea HOM05D003653 ORTHO05D004249 1.3e-87 327.0 203 86.2
TAR626G0857 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.7e-87 326.6 203 87.2
Ciclev10007512m.g Citrus clementina HOM05D003653 ORTHO05D004249 4.9e-87 325.1 203 86.7
TWI32G0371 Tripterygium wilfordii HOM05D003653 ORTHO05D004249 8.4e-87 324.3 203 88.2
Potri.010G138900 Populus trichocarpa HOM05D003653 ORTHO05D004249 1.1e-86 323.9 203 85.2
COL.COLO4_21195 Corchorus olitorius HOM05D003653 ORTHO05D004249 5.4e-86 321.6 203 84.7
Cc06_g12780 Coffea canephora HOM05D003653 ORTHO05D004249 1.2e-85 320.5 203 82.8
Haze_18437 Corylus avellana HOM05D003653 ORTHO05D004249 1.2e-85 320.5 191 89.0
DCAR_028533 Daucus carota HOM05D003653 ORTHO05D004249 2.1e-85 319.7 203 84.2
Medtr4g124570 Medicago truncatula HOM05D003653 ORTHO05D004249 2.1e-85 319.7 207 83.1
Thecc.09G069200 Theobroma cacao HOM05D003653 ORTHO05D004249 3.5e-85 318.9 203 84.7
Sabra10G0107200 Salix brachista HOM05D003653 ORTHO05D004249 7.8e-85 317.8 203 83.7
Atru.chr7.1784 Acer truncatum HOM05D003653 ORTHO05D004249 1.0e-84 317.4 203 83.7
Aqoxy7G04180 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 1.7e-84 316.6 203 85.2
MSTRG.26501 Avicennia marina HOM05D003653 ORTHO05D004249 1.7e-84 316.6 203 84.7
Psat4g019560 Pisum sativum HOM05D003653 ORTHO05D004249 2.3e-84 316.2 207 82.6
Migut.L01598 Erythranthe guttata HOM05D003653 ORTHO05D004249 3.0e-84 315.8 203 83.3
FvH4_1g09540 Fragaria vesca HOM05D003653 ORTHO05D004249 3.0e-84 315.8 203 84.7
FAN19G0402 Fragaria x ananassa HOM05D003653 ORTHO05D004249 3.0e-84 315.8 203 84.7
C06p47610 Brassica napus HOM05D003653 ORTHO05D004249 6.6e-84 314.7 203 84.2
VMungo1215G1873 Vigna mungo HOM05D003653 ORTHO05D004249 6.6e-84 314.7 207 82.6
Aqoxy4G00013 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 8.6e-84 314.3 203 84.7
Nn8g38522 Nelumbo nucifera HOM05D003653 ORTHO05D004249 8.6e-84 314.3 203 84.7
TPR.G12688 Trifolium pratense HOM05D003653 ORTHO05D004249 8.6e-84 314.3 207 81.6
FAN26G0928 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.1e-83 313.9 201 84.6
FAN26G2747 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.1e-83 313.9 201 84.6
Lalb_Chr13g0299181 Lupinus albus HOM05D003653 ORTHO05D004249 1.1e-83 313.9 207 82.1
RcHm_v2.0_Chr2g0096121 Rosa chinensis HOM05D003653 ORTHO05D004249 1.9e-83 313.2 203 84.7
Gohir.A06G084400 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.5e-83 312.8 203 82.8
Duzib150G1359 Durio zibethinus HOM05D003653 ORTHO05D004249 3.3e-83 312.4 203 83.7
Glyma.13G114900 Glycine max HOM05D003653 ORTHO05D004249 3.3e-83 312.4 207 82.1
SalBow5G5324 Salvia bowleyana HOM05D003653 ORTHO05D004249 4.3e-83 312.0 203 82.8
AL2G33210 Arabidopsis lyrata HOM05D003653 ORTHO05D004249 5.6e-83 311.6 203 83.3
FAN23G3130 Fragaria x ananassa HOM05D003653 ORTHO05D004249 5.6e-83 311.6 201 84.1
Lj4g0027638 Lotus japonicus HOM05D003653 ORTHO05D004249 5.6e-83 311.6 207 81.2
C02p31060 Brassica napus HOM05D003653 ORTHO05D004249 7.3e-83 311.2 203 82.8
AT1G73430 Arabidopsis thaliana HOM05D003653 ORTHO05D004249 9.6e-83 310.8 203 83.3
Gohir.D06G081700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 9.6e-83 310.8 203 81.8
Gorai.010G095200 Gossypium raimondii HOM05D003653 ORTHO05D004249 9.6e-83 310.8 203 81.8
Phvul.003G126900 Phaseolus vulgaris HOM05D003653 ORTHO05D004249 9.6e-83 310.8 207 82.1
Thhalv10018146m.g Eutrema salsugineum HOM05D003653 ORTHO05D004249 1.2e-82 310.5 203 83.3
Glyma.17G045100 Glycine max HOM05D003653 ORTHO05D004249 1.2e-82 310.5 207 81.6
Lsat_1_v5_gn_9_48260 Lactuca sativa HOM05D003653 ORTHO05D004249 1.2e-82 310.5 203 82.8
Sp5g28630 Schrenkiella parvula HOM05D003653 ORTHO05D004249 1.2e-82 310.5 203 82.8
Manes.03G045400 Manihot esculenta HOM05D003653 ORTHO05D004249 1.6e-82 310.1 203 84.2
FAN28G1145 Fragaria x ananassa HOM05D003653 ORTHO05D004249 2.1e-82 309.7 201 83.6
Carub.0001s3831 Capsella rubella HOM05D003653 ORTHO05D004249 6.2e-82 308.1 203 82.3
HanXRQChr11g0323951 Helianthus annuus HOM05D003653 ORTHO05D004249 6.2e-82 308.1 203 82.8
THA.LOC104812181 Tarenaya hassleriana HOM05D003653 ORTHO05D004249 8.1e-82 307.8 203 82.3
CAN.G2030.2 Capsicum annuum HOM05D003653 ORTHO05D004249 1.1e-81 307.4 203 78.8
EL10Ac8g18959 Beta vulgaris HOM05D003653 ORTHO05D004249 1.4e-81 307.0 203 79.8
Aa31LG4G3690 Aethionema arabicum HOM05D003653 ORTHO05D004249 1.8e-81 306.6 203 81.8
Gorai.013G221900 Gossypium raimondii HOM05D003653 ORTHO05D004249 2.4e-81 306.2 203 82.3
Sopen04g003800 Solanum pennellii HOM05D003653 ORTHO05D004249 2.4e-81 306.2 203 79.8
PGSC0003DMG400026759 Solanum tuberosum HOM05D003653 ORTHO05D004249 2.4e-81 306.2 203 79.8
Solyc04g008640.3 Solanum lycopersicum HOM05D003653 ORTHO05D004249 5.2e-81 305.1 203 79.8
CAN.G137.40 Capsicum annuum HOM05D003653 ORTHO05D004249 8.9e-81 304.3 203 78.3
Gohir.D13G195800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.6e-80 302.8 203 81.3
Nitab4.5_0001114g0100 Nicotiana tabacum HOM05D003653 ORTHO05D004249 2.6e-80 302.8 202 79.2
Sc18g0002910 Simmondsia chinensis HOM05D003653 ORTHO05D004249 2.6e-80 302.8 203 80.8
ECA247G3145 Erigeron canadensis HOM05D003653 ORTHO05D004249 3.4e-80 302.4 203 80.8
Aqoxy1G02116 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 5.8e-80 301.6 210 79.5
Sed0017256 Sechium edule HOM05D003653 ORTHO05D004249 5.8e-80 301.6 210 79.0
Gohir.A13G188800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 7.6e-80 301.2 203 81.8
arahy.Tifrunner.gnm1.ann1.H5KB4L Arachis hypogaea HOM05D003653 ORTHO05D004249 2.2e-79 299.7 207 77.8
arahy.Tifrunner.gnm1.ann1.LZJ3ZW Arachis hypogaea HOM05D003653 ORTHO05D004249 2.2e-79 299.7 207 77.8
CsaV3_5G037140 Cucumis sativus L. HOM05D003653 ORTHO05D004249 2.9e-79 299.3 203 79.8
Os08g0451000 Oryza sativa ssp. japonica HOM05D003653 ORTHO05D004249 2.9e-79 299.3 203 79.8
AUR62028329 Chenopodium quinoa HOM05D003653 ORTHO05D004249 3.8e-79 298.9 203 78.3
MD15G1224400 Malus domestica HOM05D003653 ORTHO05D004249 3.8e-79 298.9 203 80.3
Hund08907 Selenicereus undatus HOM05D003653 ORTHO05D004249 3.8e-79 298.9 202 77.7
MELO3C022888.2 Cucumis melo HOM05D003653 ORTHO05D004249 6.4e-79 298.1 210 77.1
RcHm_v2.0_Chr2g0096281 Rosa chinensis HOM05D003653 ORTHO05D004249 6.4e-79 298.1 191 83.8
Ah.09g228870 Amaranthus hybridus HOM05D003653 ORTHO05D004249 1.1e-78 297.4 203 78.3
ClCG08G005060 Citrullus lanatus HOM05D003653 ORTHO05D004249 1.1e-78 297.4 210 77.6
ATR0099G047 Amborella trichopoda HOM05D003653 ORTHO05D004249 1.9e-78 296.6 203 80.3
Lj6C86G4 Lonicera japonica HOM05D003653 ORTHO05D004249 1.9e-78 296.6 189 86.2
Peaxi162Scf00320g00019 Petunia axillaris HOM05D003653 ORTHO05D004249 2.4e-78 296.2 188 83.0
MD02G1104000 Malus domestica HOM05D003653 ORTHO05D004249 4.2e-78 295.4 203 79.8
AUR62025332 Chenopodium quinoa HOM05D003653 ORTHO05D004249 2.1e-77 293.1 203 76.8
Lj4C921G8 Lonicera japonica HOM05D003653 ORTHO05D004249 2.1e-77 293.1 189 84.7
Carub.0002s2017 Capsella rubella HOM05D003653 ORTHO05D004249 6.0e-77 291.6 244 69.3
PSO724G1082 Papaver somniferum HOM05D003653 ORTHO05D004249 1.7e-76 290.0 203 76.8
CDE08G1372 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 6.6e-76 288.1 203 76.8
HPP92_012790 Vanilla planifolia HOM05D003653 ORTHO05D004249 1.1e-75 287.3 203 74.9
PSO541G4412 Papaver somniferum HOM05D003653 ORTHO05D004249 5.6e-75 285.0 198 78.3
PSO135G0095 Papaver somniferum HOM05D003653 ORTHO05D004249 9.6e-75 284.3 203 76.8
Rhsim06G0154000 Rhododendron simsii HOM05D003653 ORTHO05D004249 2.8e-74 282.7 298 59.4
unitig_8.g3535 Utricularia gibba HOM05D003653 ORTHO05D004249 2.8e-74 282.7 203 72.4
Lj6C103G5 Lonicera japonica HOM05D003653 ORTHO05D004249 2.6e-72 276.2 214 74.8
TAR383G1054 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.7e-71 273.5 255 65.9
BcaC08g46765 Brassica carinata HOM05D003653 ORTHO05D004249 6.4e-71 271.6 203 74.9
BolC6t39799H Brassica oleracea HOM05D003653 ORTHO05D004249 6.4e-71 271.6 208 75.0
A07p39380 Brassica napus HOM05D003653 ORTHO05D004249 1.9e-70 270.0 203 74.9
CARHR066480 Cardamine hirsuta HOM05D003653 ORTHO05D004249 1.5e-64 250.4 203 70.4
MBI13_g01694_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 1.5e-64 250.4 203 72.4
Haze_06171 Corylus avellana HOM05D003653 ORTHO05D004249 9.9e-64 247.7 151 88.7
SMO196G0011 Selaginella moellendorffii HOM05D003653 ORTHO05D004249 7.4e-59 231.5 201 62.7
Mapoly0109s0022 Marchantia polymorpha HOM05D003653 ORTHO05D004249 8.1e-58 228.0 201 58.7
CAN.G1364.1 Capsicum annuum HOM05D003653 ORTHO05D004249 1.1e-57 227.6 146 82.9
BraA07t31487Z Brassica rapa HOM05D003653 ORTHO05D004249 1.8e-57 226.9 208 65.9
Pp3c10_7010 Physcomitrium patens HOM05D003653 ORTHO05D004249 6.9e-57 224.9 201 61.7
Actinidia26999 Actinidia chinensis HOM05D003653 ORTHO05D004249 2.0e-56 223.4 137 89.1
Sopen07g006320 Solanum pennellii HOM05D003653 ORTHO05D004249 3.4e-56 222.6 249 55.0
Cpa.g.sc82.47 Carica papaya HOM05D003653 ORTHO05D004249 2.5e-54 216.5 141 82.3
Duzib187G0285 Durio zibethinus HOM05D003653 ORTHO05D004249 1.3e-50 204.1 125 85.6
PSO675G3146 Papaver somniferum HOM05D003653 ORTHO05D004249 1.3e-42 177.6 143 70.6
BolC2t09153H Brassica oleracea HOM05D003653 ORTHO05D004249 6.3e-42 175.3 108 85.2
QL02p096270 Quercus lobata HOM05D003653 ORTHO05D004249 1.5e-40 170.6 148 64.9
CBR_g20391 Chara braunii HOM05D003653 ORTHO05D004249 3.4e-40 169.5 219 47.9
Cre03.g203750 Chlamydomonas reinhardtii HOM05D003653 ORTHO05D004249 3.6e-37 159.5 207 47.8
Haze_16166 Corylus avellana HOM05D003653 ORTHO05D004249 3.6e-37 159.5 114 80.7
Lsat_1_v5_gn_7_58641 Lactuca sativa HOM05D003653 ORTHO05D004249 3.6e-37 159.5 108 80.6
Lsat_1_v5_gn_2_26321 Lactuca sativa HOM05D003653 ORTHO05D004249 2.3e-36 156.8 108 79.6
Lsat_1_v5_gn_2_82101 Lactuca sativa HOM05D003653 ORTHO05D004249 6.7e-36 155.2 101 83.2
Zm00001eb040740 Zea mays HOM05D003653 ORTHO05D004249 4.3e-35 152.5 90 87.8
Lsat_1_v5_gn_4_28660 Lactuca sativa HOM05D003653 ORTHO05D004249 9.7e-35 151.4 108 78.7
Lsat_1_v5_gn_5_93841 Lactuca sativa HOM05D003653 ORTHO05D004249 1.7e-34 150.6 108 76.9
Gorai.013G153500 Gossypium raimondii HOM05D003653 ORTHO05D004249 4.1e-33 146.0 106 74.5
SEGI_38760 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 1.5e-32 144.1 134 65.7
Oeu030621.1 Olea europaea HOM05D003653 ORTHO05D004249 3.4e-32 142.9 131 64.1
Haze_19192 Corylus avellana HOM05D003653 ORTHO05D004249 1.0e-31 141.4 126 68.3
ECA232G2537 Erigeron canadensis HOM05D003653 ORTHO05D004249 7.9e-29 131.7 84 85.7
Pp3c14_9870 Physcomitrium patens HOM05D003653 ORTHO05D004249 1.8e-28 130.6 236 38.6
PRCOL_00003556 Prasinoderma coloniale HOM05D003653 ORTHO05D004249 4.4e-27 125.9 176 40.9
SEGI_01409 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 1.3e-26 124.4 118 61.9
Gohir.D13G136950 Gossypium hirsutum HOM05D003653 ORTHO05D004249 3.7e-26 122.9 96 69.8
Nitab4.5_0000055g0010 Nicotiana tabacum HOM05D003653 ORTHO05D004249 1.1e-25 121.3 82 81.7
Lsat_1_v5_gn_7_30301 Lactuca sativa HOM05D003653 ORTHO05D004249 3.8e-23 112.8 63 88.9
CAN.G12730.1 Capsicum annuum HOM05D003653 ORTHO05D004249 1.6e-21 107.5 79 72.2
Lsat_1_v5_gn_2_18300 Lactuca sativa HOM05D003653 ORTHO05D004249 2.0e-19 100.5 55 92.7
VMungo1215G0910 Vigna mungo HOM05D003653 ORTHO05D004249 5.5e-14 82.4 107 50.5
Haze_16165 Corylus avellana HOM05D003653 ORTHO05D004249 2.4e-09 67.0 41 73.2


User provided reference genes

Program Settings