Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010065 Camellia sinensis var. sinensis HOM05D007916 ORTHO05D010074 7.0e-86 320.9 196 100.0
Hma1.2p1_0085F.1_g044830 Hydrangea macrophylla HOM05D007916 ORTHO05D010074 1.8e-65 253.1 150 80.7
Dinv40180 Davidia involucrata HOM05D000046 ORTHO05D000195 1.2e-64 250.4 154 77.3
QL06p052846 Quercus lobata HOM05D007916 ORTHO05D010074 7.5e-64 247.7 153 78.4
CANSAT25G0415 Cannabis sativa HOM05D007916 ORTHO05D010074 9.9e-64 247.3 150 78.0
MD02G1118100 Malus domestica HOM05D007916 ORTHO05D010074 9.9e-64 247.3 149 77.2
Aqoxy6G01679 Aquilegia oxysepala HOM05D007916 ORTHO05D010074 1.3e-63 246.9 155 76.8
Ah.08g211140 Amaranthus hybridus HOM05D007916 ORTHO05D010074 2.2e-63 246.1 150 80.0
Manes.01G154600 Manihot esculenta HOM05D007916 ORTHO05D010074 2.2e-63 246.1 150 80.0
Manes.17G004000 Manihot esculenta HOM05D007916 ORTHO05D010074 2.9e-63 245.7 150 79.3
MBI08_g04809_MAGBIO Magnolia biondii HOM05D007916 ORTHO05D010074 6.4e-63 244.6 149 79.2
Manes.02G113500 Manihot esculenta HOM05D007916 ORTHO05D010074 1.1e-62 243.8 150 78.7
CiPaw.08G181000 Carya illinoinensis HOM05D007916 ORTHO05D010074 1.4e-62 243.4 149 77.2
Nn5g30966 Nelumbo nucifera HOM05D007916 ORTHO05D010074 2.4e-62 242.7 153 77.8
Prupe.7G181300 Prunus persica HOM05D007916 ORTHO05D010074 3.2e-62 242.3 149 76.5
HanXRQChr14g0442461 Helianthus annuus HOM05D007916 ORTHO05D010074 5.4e-62 241.5 151 74.8
Potri.005G100700 Populus trichocarpa HOM05D007916 ORTHO05D010074 5.4e-62 241.5 151 77.5
Lj2g0002075 Lotus japonicus HOM05D007916 ORTHO05D010074 1.2e-61 240.4 151 75.5
FvH4_1g10500 Fragaria vesca HOM05D007916 ORTHO05D010074 2.1e-61 239.6 151 76.2
FAN19G0206 Fragaria x ananassa HOM05D007916 ORTHO05D010074 2.1e-61 239.6 151 76.2
Sabra05G0083300 Salix brachista HOM05D007916 ORTHO05D010074 2.1e-61 239.6 153 75.8
MELO3C013719.2 Cucumis melo HOM05D007916 ORTHO05D010074 2.7e-61 239.2 149 74.5
FAN26G2729 Fragaria x ananassa HOM05D007916 ORTHO05D010074 6.0e-61 238.0 151 76.2
FAN26G3374 Fragaria x ananassa HOM05D007916 ORTHO05D010074 6.0e-61 238.0 151 76.2
RcHm_v2.0_Chr2g0097361 Rosa chinensis HOM05D007916 ORTHO05D010074 6.0e-61 238.0 149 77.2
TAR381G0850 Trochodendron aralioides HOM05D007916 ORTHO05D010074 6.0e-61 238.0 149 74.5
FAN28G0654 Fragaria x ananassa HOM05D007916 ORTHO05D010074 1.3e-60 236.9 151 75.5
Lsat_1_v5_gn_2_73460 Lactuca sativa HOM05D007916 ORTHO05D010074 1.3e-60 236.9 150 77.3
Cfa007071 Carpinus fangiana HOM05D007916 ORTHO05D010074 1.7e-60 236.5 156 73.7
Lalb_Chr09g0321231 Lupinus albus HOM05D007916 ORTHO05D010074 1.7e-60 236.5 150 75.3
Duzib264G1152 Durio zibethinus HOM05D007916 ORTHO05D010074 2.3e-60 236.1 150 74.0
Sopen02g027500 Solanum pennellii HOM05D007916 ORTHO05D010074 2.3e-60 236.1 150 74.0
arahy.Tifrunner.gnm1.ann1.B3G9N7 Arachis hypogaea HOM05D007916 ORTHO05D010074 5.1e-60 235.0 154 75.3
arahy.Tifrunner.gnm1.ann1.IBR8Q2 Arachis hypogaea HOM05D007916 ORTHO05D010074 5.1e-60 235.0 154 75.3
Cfa021284 Carpinus fangiana HOM05D007916 ORTHO05D010074 5.1e-60 235.0 159 73.0
Thecc.01G006300 Theobroma cacao HOM05D007916 ORTHO05D010074 1.5e-59 233.4 152 73.0
MD02G1118400 Malus domestica HOM05D007916 ORTHO05D010074 5.6e-59 231.5 149 71.8
PGR102G1177 Punica granatum HOM05D007916 ORTHO05D010074 5.6e-59 231.5 155 74.2
PGSC0003DMG403001521 Solanum tuberosum HOM05D007916 ORTHO05D010074 5.6e-59 231.5 148 73.6
AUR62040166 Chenopodium quinoa HOM05D007916 ORTHO05D010074 7.3e-59 231.1 146 77.4
ClCG10G000210 Citrullus lanatus HOM05D007916 ORTHO05D010074 1.2e-58 230.3 148 72.3
Solyc02g082740.1 Solanum lycopersicum HOM05D007916 ORTHO05D010074 2.8e-58 229.2 148 72.3
CAN.G1238.3 Capsicum annuum HOM05D007916 ORTHO05D010074 3.6e-58 228.8 148 72.3
AUR62037915 Chenopodium quinoa HOM05D007916 ORTHO05D010074 4.7e-58 228.4 146 76.7
COL.COLO4_22545 Corchorus olitorius HOM05D007916 ORTHO05D010074 4.7e-58 228.4 152 71.1
HanXRQChr14g0442451 Helianthus annuus HOM05D007916 ORTHO05D010074 8.1e-58 227.6 150 70.0
Medtr8g073850 Medicago truncatula HOM05D007916 ORTHO05D010074 1.4e-57 226.9 150 71.3
Medtr8g073770 Medicago truncatula HOM05D007916 ORTHO05D010074 1.8e-57 226.5 149 71.8
Psat4g104200 Pisum sativum HOM05D007916 ORTHO05D010074 2.4e-57 226.1 152 70.4
TPR.G18290 Trifolium pratense HOM05D007916 ORTHO05D010074 3.1e-57 225.7 151 70.2
Glyma.09G198900 Glycine max HOM05D007916 ORTHO05D010074 2.0e-56 223.0 151 68.9
Ca_22424_v3 Cicer arietinum L. HOM05D007916 ORTHO05D010074 4.4e-56 221.9 150 72.0
Phvul.003G269500 Phaseolus vulgaris HOM05D007916 ORTHO05D010074 1.3e-55 220.3 151 68.9
VMungo0251G0273 Vigna mungo HOM05D007916 ORTHO05D010074 4.9e-55 218.4 151 68.9
Lj2g0011068 Lotus japonicus HOM05D007916 ORTHO05D010074 1.6e-53 213.4 150 66.7
ATR0661G436 Amborella trichopoda HOM05D007916 ORTHO05D010074 7.8e-53 211.1 154 65.6
Zm00001eb145860 Zea mays HOM05D007916 ORTHO05D010074 5.3e-49 198.4 149 61.7
Glyma.11G085200 Glycine max HOM05D007916 ORTHO05D010074 9.0e-49 197.6 147 64.6
Phvul.002G115700 Phaseolus vulgaris HOM05D007916 ORTHO05D010074 1.7e-47 193.4 147 63.9
Os01g0879200 Oryza sativa ssp. japonica HOM05D007916 ORTHO05D010074 7.1e-46 188.0 149 57.0
Potri.005G100600 Populus trichocarpa HOM05D007916 ORTHO05D010074 4.3e-43 178.7 155 55.5
Sabra05G0083200 Salix brachista HOM05D007916 ORTHO05D010074 2.1e-42 176.4 155 56.1
EL10Ac4g07997 Beta vulgaris HOM05D007916 ORTHO05D010074 6.2e-42 174.9 151 55.0
Lj4P234T30 Lonicera japonica HOM05D007916 ORTHO05D010074 4.0e-41 172.2 104 76.0
AUR62034212 Chenopodium quinoa HOM05D007916 ORTHO05D010074 1.3e-39 167.2 149 53.7
EL10Ac1g00145 Beta vulgaris HOM05D007916 ORTHO05D010074 2.9e-39 166.0 148 56.1
AUR62029252 Chenopodium quinoa HOM05D007916 ORTHO05D010074 3.8e-39 165.6 149 52.3
Ah.05g178650 Amaranthus hybridus HOM05D007916 ORTHO05D010074 1.1e-38 164.1 146 50.0
AUR62034214 Chenopodium quinoa HOM05D007916 ORTHO05D010074 3.2e-38 162.5 149 52.3
AUR62029249 Chenopodium quinoa HOM05D007916 ORTHO05D010074 1.1e-35 154.1 150 52.0
Os01g0879300 Oryza sativa ssp. japonica HOM05D007916 ORTHO05D010074 1.6e-29 133.7 163 45.4
VMungo1215G2711 Vigna mungo HOM05D007916 ORTHO05D010074 2.3e-28 129.8 145 50.3
AUR62014631 Chenopodium quinoa HOM05D007916 ORTHO05D010074 7.1e-22 108.2 115 45.2
SMO143G0023 Selaginella moellendorffii HOM05D007916 ORTHO05D010074 2.7e-21 106.3 144 35.4
AUR62029251 Chenopodium quinoa HOM05D007916 ORTHO05D010074 4.5e-16 89.0 116 42.2
Zm00001eb051440 Zea mays HOM05D007916 ORTHO05D010074 1.9e-14 83.6 89 46.1
QL08p032297 Quercus lobata HOM05D000180 ORTHO05D000099 5.1e-12 75.5 133 36.8
Zm00001eb212920 Zea mays HOM05D007916 ORTHO05D010074 3.7e-10 69.3 81 43.2
Ah.09g237060 Amaranthus hybridus HOM05D007916 ORTHO05D010074 9.1e-09 64.7 89 38.2
Haze_22988 Corylus avellana HOM05D000180 ORTHO05D000099 1.0e-07 61.2 124 33.9
Gohir.A10G062800 Gossypium hirsutum HOM05D000180 ORTHO05D000099 1.3e-07 60.8 126 34.1
FAN14G5554 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.7e-07 60.5 96 39.6
Phvul.001G145700 Phaseolus vulgaris HOM05D000180 ORTHO05D000099 1.7e-07 60.5 156 27.6
Gorai.011G068500 Gossypium raimondii HOM05D000180 ORTHO05D000099 2.2e-07 60.1 126 34.1
Potri.005G100750 Populus trichocarpa HOM05D007916 ORTHO05D010074 2.2e-07 60.1 61 49.2
FvH4_6g42510 Fragaria vesca HOM05D000180 ORTHO05D000099 2.9e-07 59.7 96 39.6
Prupe.3G215100 Prunus persica HOM05D000180 ORTHO05D000099 2.9e-07 59.7 133 30.8
PGR004G1299 Punica granatum HOM05D000180 ORTHO05D000099 2.9e-07 59.7 149 28.9
QL10p054545 Quercus lobata HOM05D000180 ORTHO05D000099 3.8e-07 59.3 97 39.2
FAN05G1781 Fragaria x ananassa HOM05D000180 ORTHO05D000099 6.5e-07 58.5 89 39.3
CSS0026090 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 8.5e-07 58.2 144 29.9
COL.COLO4_30590 Corchorus olitorius HOM05D000180 ORTHO05D000099 8.5e-07 58.2 125 33.6
Gohir.D10G064500 Gossypium hirsutum HOM05D000180 ORTHO05D000099 8.5e-07 58.2 126 33.3
Medtr4g013770 Medicago truncatula HOM05D000180 ORTHO05D000099 8.5e-07 58.2 144 29.9
Glyma.01G127200 Glycine max HOM05D000180 ORTHO05D000099 1.1e-06 57.8 151 32.5
Cc04_g12480 Coffea canephora HOM05D000180 ORTHO05D000099 1.4e-06 57.4 147 31.3
SEGI_27732 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 1.4e-06 57.4 153 30.1
Eucgr.A02481 Eucalyptus grandis HOM05D000180 ORTHO05D000099 1.9e-06 57.0 130 29.2
Phvul.010G063500 Phaseolus vulgaris HOM05D000180 ORTHO05D000099 1.9e-06 57.0 141 29.8
PGR031G0578 Punica granatum HOM05D001508 ORTHO05D001381 1.9e-06 57.0 146 28.8
TWI34G0222 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 1.9e-06 57.0 147 30.6
COL.COLO4_30591 Corchorus olitorius HOM05D000180 ORTHO05D000099 2.5e-06 56.6 126 33.3
Lalb_Chr12g0207311 Lupinus albus HOM05D000180 ORTHO05D000099 2.5e-06 56.6 147 35.4
TPR.G5231 Trifolium pratense HOM05D000180 ORTHO05D000099 2.5e-06 56.6 129 34.1
VMungo0331G1833 Vigna mungo HOM05D000180 ORTHO05D000099 2.5e-06 56.6 143 30.8
Lalb_Chr12g0207301 Lupinus albus HOM05D000180 ORTHO05D000099 3.2e-06 56.2 147 35.4
BcaC05g26195 Brassica carinata HOM05D000180 ORTHO05D000099 4.2e-06 55.8 145 26.2
C05p22000 Brassica napus HOM05D000180 ORTHO05D000099 4.2e-06 55.8 145 26.2
Cfa009617 Carpinus fangiana HOM05D000180 ORTHO05D000099 4.2e-06 55.8 158 29.1
Lalb_Chr19g0125451 Lupinus albus HOM05D000180 ORTHO05D000099 4.2e-06 55.8 152 28.9
VMungo1127G1606 Vigna mungo HOM05D000180 ORTHO05D000099 4.2e-06 55.8 118 34.7
BolC5t30897H Brassica oleracea HOM05D000180 ORTHO05D000099 5.5e-06 55.5 145 26.2
COL.COLO4_30587 Corchorus olitorius HOM05D000180 ORTHO05D000099 5.5e-06 55.5 128 33.6
Thhalv10006492m.g Eutrema salsugineum HOM05D000180 ORTHO05D000099 5.5e-06 55.5 150 30.7
Atru.chr3.2243 Acer truncatum HOM05D000180 ORTHO05D000099 7.2e-06 55.1 126 31.0
FAN02G4293 Fragaria x ananassa HOM05D000180 ORTHO05D000099 7.2e-06 55.1 119 32.8
Glyma.03G044500 Glycine max HOM05D000180 ORTHO05D000099 7.2e-06 55.1 147 29.9
EL10Ac9g21417 Beta vulgaris HOM05D000180 ORTHO05D000099 9.4e-06 54.7 118 35.6
Nn7g35945 Nelumbo nucifera HOM05D000180 ORTHO05D000099 9.4e-06 54.7 144 27.8
Psat3g067480 Pisum sativum HOM05D000180 ORTHO05D000099 9.4e-06 54.7 167 25.1
TPR.G5199 Trifolium pratense HOM05D000180 ORTHO05D000099 9.4e-06 54.7 118 30.5


User provided reference genes

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