Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010049 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-226 788.5 397 100.0
CSS0007197 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-216 755.7 410 94.1
CSS0014159 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.3e-213 745.3 410 92.7
CSS0000071 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.4e-210 736.1 399 94.0
CSS0044892 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.6e-207 724.2 405 91.9
CSS0049789 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.0e-205 718.0 410 90.5
CSS0046859 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.6e-200 700.3 389 92.8
CSS0011758 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.6e-196 688.7 409 86.8
CSS0048122 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.9e-195 684.5 405 86.4
CSS0001042 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.4e-78 295.4 168 81.0
CSS0038750 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.2e-47 194.9 417 32.9
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.8e-47 192.6 418 31.8
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-46 191.8 418 31.8
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-46 191.8 418 31.6
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.3e-46 191.4 418 32.3
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.2e-46 190.7 418 32.3
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.2e-46 190.7 418 32.3
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.9e-46 189.5 426 31.7
CSS0018878 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.5e-46 189.1 417 32.1
CSS0002114 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-45 188.3 410 32.2
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.2e-45 186.8 425 31.1
CSS0026285 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.5e-45 186.0 417 31.4
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.1e-44 184.1 425 30.6
CSS0029919 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-43 179.5 417 30.9
CSS0018155 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.5e-42 177.2 337 32.9
CSS0034950 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.5e-42 177.2 337 32.9
CSS0040322 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.5e-42 177.2 337 32.9
CSS0046417 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.5e-42 177.2 337 32.9
CSS0006283 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.3e-42 176.4 337 32.9
CSS0023104 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.7e-42 176.0 337 32.9
CSS0006218 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.6e-42 175.3 337 32.9
Dinv02273 Davidia involucrata HOM05D008484 ORTHO05D007523 6.1e-36 156.0 339 32.2
Rhsim06G0054100 Rhododendron simsii HOM05D017774 ORTHO05D013099 1.4e-27 128.3 358 26.3
Dinv07248 Davidia involucrata HOM05D008484 ORTHO05D007523 5.7e-26 122.9 176 35.8
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.4e-24 118.2 412 25.7
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.4e-24 118.2 412 25.7
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.5e-23 114.8 395 24.3
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.5e-23 113.2 454 26.4
CSS0008852 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 7.7e-23 112.5 308 27.6
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.3e-22 111.7 453 24.7
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.3e-22 111.7 409 26.2
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.7e-22 111.3 408 26.7
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.2e-21 105.9 385 25.2
TWI59G0944 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.6e-20 104.8 408 26.0
vmacro00756 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 7.9e-20 102.4 342 25.4
CSS0032852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 8.8e-19 99.0 429 25.2
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.0e-18 97.8 393 24.9
CSS0000781 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 3.3e-18 97.1 329 25.5
CSS0030886 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 5.7e-18 96.3 260 26.9
CSS0050301 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 7.4e-18 95.9 330 24.5
CSS0038166 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 9.7e-18 95.5 251 25.9
Rhsim03G0108200 Rhododendron simsii HOM05D008484 ORTHO05D007523 1.7e-17 94.7 373 26.3
CSS0050518 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.2e-17 94.4 243 27.6
CSS0012098 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 6.3e-17 92.8 329 24.6
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 8.2e-17 92.4 442 26.0
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.1e-16 92.0 364 24.7
CSS0009580 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.8e-16 91.3 330 24.5
Dinv07454 Davidia involucrata HOM05D008484 ORTHO05D007523 3.1e-16 90.5 195 29.7
CSS0039395 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-16 89.7 332 26.5
CSS0030799 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-15 88.2 454 24.0
CSS0040996 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.5e-15 88.2 306 24.2
CSS0043631 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.0e-15 87.8 323 24.1
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.5e-15 87.0 305 24.6
CSS0018852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.5e-15 86.7 263 25.1
TWI38G0209 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 5.9e-15 86.3 169 36.1
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.9e-14 84.0 205 29.8
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.8e-14 83.6 152 31.6
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.8e-14 83.6 333 24.6
vmacro19839 Vaccinium macrocarpon HOM05D008484 ORTHO05D007523 3.8e-14 83.6 223 27.8
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.0e-14 83.2 152 30.9
CSS0043583 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 5.0e-14 83.2 164 29.9
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.5e-14 82.8 205 29.3
CSS0037995 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 6.5e-14 82.8 315 26.0
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-13 81.6 424 24.5
CSS0029864 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.9e-13 81.3 399 23.8
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.5e-13 80.9 327 26.0
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-13 80.5 251 24.7
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-13 80.5 251 24.7
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-13 80.5 251 24.7
CSS0034164 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 5.5e-13 79.7 300 25.0
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.4e-13 79.0 328 27.1
CSS0011419 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.2e-12 78.6 159 32.1
CSS0030923 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.2e-12 78.6 238 24.4
CSS0045699 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.2e-12 78.6 238 24.4
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.6e-12 78.2 435 23.2
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 8.0e-12 75.9 306 22.9
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.0e-12 75.9 420 21.9
RhsimUnG0058200 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.4e-11 75.1 413 23.2
CSS0010228 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 4.0e-11 73.6 335 22.1
CSS0021465 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.2e-11 73.2 395 21.5
CSS0018760 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 8.8e-11 72.4 141 34.0
Rhsim13G0177800 Rhododendron simsii HOM05D008484 ORTHO05D007523 8.8e-11 72.4 421 22.8
CSS0028075 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112595 1.5e-10 71.6 167 28.1
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 1.5e-10 71.6 385 20.8
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 1.5e-10 71.6 451 21.5
CSS0020586 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.0e-10 71.2 391 21.0
CSS0022760 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.0e-10 71.2 395 21.8
Rhsim01G0158000 Rhododendron simsii HOM05D017361 ORTHO05D007523 3.3e-10 70.5 122 31.1
CSS0030913 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110203 1.3e-09 68.6 249 25.3
CSS0030123 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.8e-09 67.4 393 21.4
Rhsim09G0062700 Rhododendron simsii HOM05D027677 ORTHO05D338544 3.7e-09 67.0 59 42.4
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 4.8e-09 66.6 314 21.0
Rhsim02G0150000 Rhododendron simsii HOM05D017774 ORTHO05D013099 8.2e-09 65.9 135 30.4
CSS0024354 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.4e-08 65.1 330 22.7
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.8e-08 64.7 97 34.0
Rhsim01G0161300 Rhododendron simsii HOM05D027677 ORTHO05D339865 3.1e-08 63.9 382 21.2
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.1e-08 63.5 324 23.8
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.1e-08 63.5 324 23.8
CSS0025792 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109058 5.3e-08 63.2 434 23.3
TWI38G2357 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 5.3e-08 63.2 59 50.8
Dinv04550 Davidia involucrata HOM05D000065 ORTHO05D000162 7.0e-08 62.8 220 26.8
CSS0036762 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 9.1e-08 62.4 290 23.8
CSS0009122 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109114 1.2e-07 62.0 274 25.5
CSS0001885 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.5e-07 60.5 82 36.6
CSS0027797 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.5e-07 60.5 82 36.6
CSS0028780 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.5e-07 60.5 82 36.6
Rhsim01G0036600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-07 60.5 413 21.1
Rhsim09G0061900 Rhododendron simsii HOM05D027677 ORTHO05D338825 3.5e-07 60.5 59 37.3
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-07 60.5 307 22.1
CSS0004606 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.5e-07 60.1 82 36.6
CSS0008783 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.5e-07 60.1 316 21.8
CSS0033748 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.5e-07 60.1 82 36.6
RcHm_v2.0_Chr1g0358931 Rosa chinensis HOM05D003258 ORTHO05D010059 5.9e-07 59.7 144 29.2
CSS0006459 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-06 58.9 82 36.6
RhsimUnG0192900 Rhododendron simsii HOM05D017774 ORTHO05D013099 1.3e-06 58.5 61 42.6
FvH4_3g25201 Fragaria vesca HOM05D003258 ORTHO05D010059 2.2e-06 57.8 340 22.6
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.9e-06 57.4 127 29.9
vmacro05225 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 5.0e-06 56.6 229 20.5
CSS0044385 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.5e-06 55.8 134 29.9
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 8.5e-06 55.8 263 26.6


User provided reference genes

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