Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 1.2e-100 369.8 181 100.0
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 1.6e-31 140.2 92 78.3
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 2.0e-31 139.8 86 79.1
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 7.8e-31 137.9 91 76.9
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 5.0e-30 135.2 91 75.8
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 5.0e-30 135.2 89 77.5
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 6.6e-30 134.8 92 77.2
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 1.5e-29 133.7 92 72.8
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.5e-29 133.7 91 74.7
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 4.3e-29 132.1 91 73.6
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 9.5e-29 131.0 91 72.5
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 9.5e-29 131.0 92 73.9
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 1.6e-28 130.2 92 72.8
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 1.6e-28 130.2 91 72.5
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 2.8e-28 129.4 92 72.8
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 3.6e-28 129.0 93 73.1
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 6.2e-28 128.3 92 72.8
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 6.2e-28 128.3 92 76.1
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 8.0e-28 127.9 91 71.4
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 1.8e-27 126.7 89 70.8
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 1.8e-27 126.7 91 72.5
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 2.3e-27 126.3 87 72.4
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 2.3e-27 126.3 93 71.0
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 3.1e-27 125.9 86 73.3
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 1.5e-26 123.6 92 71.7
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 2.0e-26 123.2 92 70.7
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 2.0e-26 123.2 92 68.5
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 2.0e-26 123.2 93 71.0
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 2.6e-26 122.9 87 72.4
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 2.6e-26 122.9 93 73.1
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 5.8e-26 121.7 91 67.0
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 5.8e-26 121.7 84 72.6
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 7.5e-26 121.3 91 70.3
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 9.8e-26 120.9 92 68.5
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 9.8e-26 120.9 92 68.5
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 9.8e-26 120.9 92 68.5
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 2.2e-25 119.8 93 69.9
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 3.7e-25 119.0 92 67.4
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 3.7e-25 119.0 92 68.5
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 1.4e-24 117.1 86 70.9
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 1.9e-24 116.7 87 73.6
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 1.9e-24 116.7 92 68.5
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 3.2e-24 115.9 89 69.7
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 3.2e-24 115.9 89 66.3
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 4.1e-24 115.5 92 68.5
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 4.1e-24 115.5 87 72.4
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 4.1e-24 115.5 93 68.8
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 5.4e-24 115.2 85 69.4
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 7.0e-24 114.8 93 66.7
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 9.2e-24 114.4 87 66.7
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 9.2e-24 114.4 87 71.3
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 1.2e-23 114.0 89 64.0
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 1.6e-23 113.6 87 66.7
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 2.1e-23 113.2 89 62.9
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 2.1e-23 113.2 88 65.9
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 2.7e-23 112.8 91 63.7
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 3.5e-23 112.5 91 62.6
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 3.5e-23 112.5 91 62.6
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 7.8e-23 111.3 91 61.5
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 7.8e-23 111.3 88 67.0
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 1.3e-22 110.5 87 64.4
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 1.3e-22 110.5 89 64.0
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 1.3e-22 110.5 88 67.0
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 2.3e-22 109.8 89 66.3
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 3.9e-22 109.0 86 64.0
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 6.6e-22 108.2 89 62.9
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 1.5e-21 107.1 89 61.8
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 3.3e-21 105.9 91 63.7
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 3.3e-21 105.9 90 61.1
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 5.6e-21 105.1 86 64.0
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 5.6e-21 105.1 86 61.6
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 7.3e-21 104.8 87 60.9
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 1.6e-20 103.6 87 59.8
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 1.6e-20 103.6 92 59.8
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 1.6e-20 103.6 92 59.8
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 2.1e-20 103.2 92 59.8
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 2.1e-20 103.2 92 59.8
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 4.7e-20 102.1 87 66.7
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 1.1e-19 100.9 86 65.1
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 2.3e-19 99.8 85 65.9
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 5.2e-19 98.6 88 59.1
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 6.8e-19 98.2 86 59.3
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 6.8e-19 98.2 93 57.0
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 1.5e-18 97.1 89 57.3
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 4.4e-18 95.5 91 57.1
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 4.4e-18 95.5 91 57.1
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 4.4e-18 95.5 84 58.3
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 7.5e-18 94.7 89 62.9
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 9.9e-18 94.4 91 56.0
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 1.1e-16 90.9 99 54.5
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 1.9e-16 90.1 91 53.8
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 1.6e-15 87.0 86 57.0
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 4.6e-15 85.5 87 52.9
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 3.6e-12 75.9 81 55.6
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 1.5e-10 70.5 85 48.2
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 2.0e-10 70.1 57 63.2
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 2.6e-10 69.7 70 58.6
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 8.4e-09 64.7 67 53.7
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 9.3e-08 61.2 93 44.1
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 9.3e-08 61.2 63 54.0


User provided reference genes

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