Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009964 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.3e-131 472.2 241 100.0
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.7e-105 386.3 232 86.6
CSS0010215 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.8e-95 350.9 238 79.0
CSS0050060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.1e-83 313.9 265 67.2
CSS0038593 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.2e-81 306.2 267 64.4
CSS0000995 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.5e-79 298.9 262 66.0
CSS0045906 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 6.0e-79 298.1 213 75.1
CSS0050109 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000140 4.9e-73 278.5 278 59.4
CSS0040161 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.9e-63 244.6 237 62.9
CSS0015461 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.4e-61 238.0 257 56.4
CSS0006667 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.4e-59 233.0 259 57.1
CSS0026146 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.2e-49 199.9 183 63.9
CSS0048435 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.1e-48 197.6 259 51.0
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.7e-45 185.3 292 40.1
CSS0048922 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.7e-41 173.7 204 52.5
Hma1.2p1_0131F.1_g060610 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 1.3e-38 164.1 184 48.4
CSS0042933 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.0e-34 150.2 152 56.6
Hma1.2p1_0949F.1_g240650 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 8.8e-30 134.8 150 48.0
CSS0044283 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.8e-25 119.4 110 62.7
Hma1.2p1_1271F.1_g271740 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 9.1e-19 98.2 95 54.7
Hma1.2p1_2873F.1_g329710 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 9.1e-19 98.2 82 58.5
Hma1.2p1_0340F.1_g129910 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 2.0e-18 97.1 82 57.3
Hund10328 Selenicereus undatus HOM05D000034 ORTHO05D010947 1.0e-14 84.7 134 41.0
Hund03621 Selenicereus undatus HOM05D000034 ORTHO05D010947 1.4e-14 84.3 186 32.8
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.4e-13 79.3 174 33.3
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 1.8e-11 73.9 188 32.4
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 2.4e-11 73.6 267 27.3
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.1e-11 72.8 314 24.8
CSS0018738 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.6e-10 70.9 40 85.0
Potri.005G252500 Populus trichocarpa HOM05D005504 ORTHO05D002688 1.7e-09 67.4 194 31.4
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 2.9e-09 66.6 168 30.4
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 5.0e-09 65.9 172 27.3
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 1.1e-08 64.7 175 29.7
Rhsim12G0045600 Rhododendron simsii HOM05D000034 ORTHO05D002688 1.1e-08 64.7 186 26.9
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 1.5e-08 64.3 172 26.7
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.5e-08 62.4 167 29.9
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 9.4e-08 61.6 183 26.2
EL10Ac4g08776 Beta vulgaris HOM05D005504 ORTHO05D002688 2.7e-07 60.1 177 28.8
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 8.0e-07 58.5 179 26.8
DCAR_005138 Daucus carota HOM05D000034 ORTHO05D002688 1.4e-06 57.8 221 25.3
Hma1.2p1_1121F.1_g259230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-06 57.4 222 24.3
Atru.chr4.843 Acer truncatum HOM05D000034 ORTHO05D002688 4.0e-06 56.2 185 23.8
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 4.0e-06 56.2 185 24.3
arahy.Tifrunner.gnm1.ann1.PAB5ST Arachis hypogaea HOM05D000034 ORTHO05D002688 4.0e-06 56.2 174 24.7


User provided reference genes

Program Settings