Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 4.0e-54 214.5 110 100.0
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 8.6e-41 170.2 110 83.6
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 3.7e-36 154.8 110 76.4
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 1.1e-35 153.3 110 76.4
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.4e-35 152.9 109 75.2
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.2e-35 151.8 114 75.4
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 3.5e-34 148.3 108 75.0
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 1.3e-33 146.4 110 73.6
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 3.9e-33 144.8 151 57.6
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 3.9e-33 144.8 110 72.7
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 5.0e-33 144.4 111 73.0
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 6.6e-33 144.1 110 72.7
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 6.6e-33 144.1 110 71.8
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 8.6e-33 143.7 108 72.2
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.1e-32 143.3 110 72.7
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 3.3e-32 141.7 110 70.9
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 4.3e-32 141.4 105 74.3
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 7.3e-32 140.6 110 72.7
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.2e-31 139.8 110 72.7
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 1.2e-31 139.8 107 69.2
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 1.6e-31 139.4 110 68.2
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 1.6e-31 139.4 109 71.6
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 2.1e-31 139.0 109 68.8
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 2.8e-31 138.7 120 65.0
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 3.6e-31 138.3 110 70.0
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 3.6e-31 138.3 110 68.2
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 4.7e-31 137.9 108 69.4
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 6.2e-31 137.5 104 71.2
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 6.2e-31 137.5 98 74.5
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 8.1e-31 137.1 111 69.4
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 8.1e-31 137.1 110 68.2
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 8.1e-31 137.1 110 68.2
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 1.1e-30 136.7 110 68.2
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.1e-30 136.7 78 89.7
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 1.4e-30 136.3 110 66.4
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 1.4e-30 136.3 109 70.6
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 1.4e-30 136.3 112 69.6
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 1.8e-30 136.0 110 70.9
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 1.8e-30 136.0 99 74.7
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 1.8e-30 136.0 110 68.2
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 3.1e-30 135.2 110 70.0
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 3.1e-30 135.2 106 68.9
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.0e-30 134.8 105 70.5
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 4.0e-30 134.8 110 70.9
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 4.0e-30 134.8 110 70.0
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 4.0e-30 134.8 109 69.7
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 4.0e-30 134.8 78 88.5
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 5.2e-30 134.4 109 70.6
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 5.2e-30 134.4 105 70.5
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 5.2e-30 134.4 98 76.5
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 6.8e-30 134.0 111 66.7
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 8.9e-30 133.7 105 69.5
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.2e-29 133.3 106 67.0
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.2e-29 133.3 106 67.0
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 2.0e-29 132.5 104 69.2
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 2.6e-29 132.1 98 69.4
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 3.4e-29 131.7 108 67.6
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 3.4e-29 131.7 108 66.7
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 3.4e-29 131.7 98 71.4
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 5.8e-29 131.0 101 68.3
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 1.3e-28 129.8 98 71.4
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.3e-28 129.8 97 71.1
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.3e-28 129.8 97 71.1
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 1.3e-28 129.8 109 66.1
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 1.3e-28 129.8 97 72.2
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 1.7e-28 129.4 101 70.3
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 1.7e-28 129.4 104 67.3
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.7e-28 129.4 98 69.4
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 1.7e-28 129.4 77 85.7
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 2.2e-28 129.0 78 83.3
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 2.9e-28 128.6 101 67.3
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.9e-28 128.6 104 65.4
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 4.9e-28 127.9 106 65.1
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 4.9e-28 127.9 78 83.3
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 4.9e-28 127.9 77 87.0
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 6.4e-28 127.5 109 65.1
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 8.3e-28 127.1 92 73.9
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 8.3e-28 127.1 96 70.8
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 2.4e-27 125.6 79 83.5
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 2.4e-27 125.6 97 66.0
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 2.4e-27 125.6 78 85.9
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 3.2e-27 125.2 101 70.3
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 3.2e-27 125.2 109 65.1
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 3.2e-27 125.2 94 68.1
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 4.1e-27 124.8 102 66.7
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 4.1e-27 124.8 109 61.5
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 4.1e-27 124.8 109 61.5
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 4.1e-27 124.8 79 83.5
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 5.4e-27 124.4 99 67.7
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 5.4e-27 124.4 105 62.9
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 9.2e-27 123.6 109 62.4
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 1.2e-26 123.2 99 66.7
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 1.6e-26 122.9 99 65.7
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 3.5e-26 121.7 97 67.0
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 3.5e-26 121.7 95 68.4
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 6.0e-26 120.9 106 61.3
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 6.0e-26 120.9 106 61.3
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 6.0e-26 120.9 106 61.3
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 6.0e-26 120.9 66 89.4
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 7.8e-26 120.6 99 65.7
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-25 119.4 106 61.3
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.7e-25 119.4 107 60.7
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 1.7e-25 119.4 103 61.2
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 2.3e-25 119.0 110 58.2
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 3.0e-25 118.6 110 58.2
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 3.9e-25 118.2 110 58.2
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 3.9e-25 118.2 110 58.2
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 3.9e-25 118.2 110 58.2
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 3.9e-25 118.2 110 58.2
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 5.1e-25 117.9 97 64.9
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 6.6e-25 117.5 97 64.9
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 5.6e-24 114.4 98 63.3
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 9.5e-24 113.6 66 83.3
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.6e-23 112.8 93 62.4
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.6e-23 112.8 107 57.9
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 3.1e-22 108.6 77 67.5
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 2.0e-21 105.9 86 61.6
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 6.4e-20 100.9 81 64.2
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 7.8e-18 94.0 110 57.3
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 7.3e-16 87.4 105 50.5
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 2.8e-15 85.5 55 80.0
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 2.4e-14 82.4 60 66.7
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.2e-13 80.1 89 55.1
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 2.6e-13 79.0 52 67.3
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 3.4e-13 78.6 67 56.7
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 4.2e-11 71.6 49 67.3
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 7.1e-11 70.9 65 56.9
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 2.1e-10 69.3 62 61.3
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 5.1e-09 64.7 63 52.4
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 5.1e-09 64.7 63 52.4
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 2.5e-08 62.4 58 55.2


User provided reference genes

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