Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009942 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 7.3e-121 437.2 213 100.0
CSS0005038 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 4.0e-34 149.1 141 63.1
Actinidia30490 Actinidia chinensis HOM05D004263 ORTHO05D004931 1.7e-24 117.1 80 81.2
Actinidia39296 Actinidia chinensis HOM05D004263 ORTHO05D004931 1.7e-24 117.1 80 81.2
CSS0002238 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.7e-24 117.1 80 81.2
CSS0035062 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.7e-24 117.1 80 81.2
CSS0035503 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.7e-24 117.1 80 81.2
Rhsim04G0063000 Rhododendron simsii HOM05D004263 ORTHO05D004931 1.7e-24 117.1 80 81.2
vmacro09293 Vaccinium macrocarpon HOM05D004263 ORTHO05D004931 1.7e-24 117.1 80 81.2
Cc04_g12270 Coffea canephora HOM05D004263 ORTHO05D004931 6.4e-24 115.2 80 80.0
MSTRG.11470 Avicennia marina HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
Ciclev10014147m.g Citrus clementina HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
COL.COLO4_13682 Corchorus olitorius HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
DCAR_009724 Daucus carota HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
Duzib248G0991 Durio zibethinus HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
Migut.O00120 Erythranthe guttata HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
Lj1C736G5 Lonicera japonica HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
PSO339G5244 Papaver somniferum HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
PSO801G0468 Papaver somniferum HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
Potri.013G147600 Populus trichocarpa HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
Sabra13G0119200 Salix brachista HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
SalBow7G3995 Salvia bowleyana HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
SGA_v2.0_scaffold90G27889 Striga asiatica HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
Thecc.02G171500 Theobroma cacao HOM05D004263 ORTHO05D004931 8.3e-24 114.8 80 80.0
arahy.Tifrunner.gnm1.ann1.0PC56D Arachis hypogaea HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
arahy.Tifrunner.gnm1.ann1.RA2UAB Arachis hypogaea HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
Gohir.A01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
Gohir.D01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
Gorai.002G017100 Gossypium raimondii HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
Lj8C117G6 Lonicera japonica HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
Lj3g0003932 Lotus japonicus HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
Lalb_Chr22g0356351 Lupinus albus HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
Nitab4.5_0000025g0510 Nicotiana tabacum HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
Nitab4.5_0001514g0020 Nicotiana tabacum HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
Peaxi162Scf00255g01022 Petunia axillaris HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
Solyc06g005080.4 Solanum lycopersicum HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
Sopen06g001070 Solanum pennellii HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
unitig_0.g1433 Utricularia gibba HOM05D004263 ORTHO05D004931 1.1e-23 114.4 80 78.8
CAN.G224.16 Capsicum annuum HOM05D004263 ORTHO05D004931 1.4e-23 114.0 80 76.2
Ah.11g047230 Amaranthus hybridus HOM05D004263 ORTHO05D004931 1.8e-23 113.6 80 77.5
Manes.12G082900 Manihot esculenta HOM05D004263 ORTHO05D004931 1.8e-23 113.6 80 78.8
THA.LOC104809434 Tarenaya hassleriana HOM05D004263 ORTHO05D004931 2.4e-23 113.2 80 78.8
EL10As1g23122 Beta vulgaris HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 77.5
CiPaw.03G169700 Carya illinoinensis HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 78.8
FvH4_6g44560 Fragaria vesca HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 78.8
FAN02G3638 Fragaria x ananassa HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 78.8
FAN09G1275 Fragaria x ananassa HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 78.8
FAN14G1228 Fragaria x ananassa HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 78.8
MBI02_g13236_MAGBIO Magnolia biondii HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 78.8
MD14G1065300 Malus domestica HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 78.8
Prupe.3G231000 Prunus persica HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 78.8
QL08p037295 Quercus lobata HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 78.8
RcHm_v2.0_Chr2g0161771 Rosa chinensis HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 78.8
TAR627G0082 Trochodendron aralioides HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 78.8
GSVIVG01030005001 Vitis vinifera HOM05D004263 ORTHO05D004931 3.2e-23 112.8 80 78.8
Aa31LG1G2150 Aethionema arabicum HOM05D004263 ORTHO05D004931 4.1e-23 112.5 80 77.5
Aqoxy1G01192 Aquilegia oxysepala HOM05D004263 ORTHO05D004931 4.1e-23 112.5 80 78.8
Dinv23716 Davidia involucrata HOM05D004263 ORTHO05D004931 4.1e-23 112.5 80 78.8
ECA246G4434 Erigeron canadensis HOM05D004263 ORTHO05D004931 4.1e-23 112.5 80 78.8
Hma1.2p1_0565F.1_g179560 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 4.1e-23 112.5 80 78.8
Hma1.2p1_0565F.1_g179570 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 4.1e-23 112.5 80 78.8
Lsat_1_v5_gn_3_39980 Lactuca sativa HOM05D004263 ORTHO05D004931 4.1e-23 112.5 80 78.8
PGR142G2990 Punica granatum HOM05D004263 ORTHO05D004931 4.1e-23 112.5 80 77.5
Ca_01536_v3 Cicer arietinum L. HOM05D004263 ORTHO05D004931 5.4e-23 112.1 80 77.5
Psat2g144400 Pisum sativum HOM05D004263 ORTHO05D004931 5.4e-23 112.1 80 77.5
CANSAT64G2398 Cannabis sativa HOM05D004263 ORTHO05D004931 7.0e-23 111.7 80 77.5
Cpa.g.sc34.88 Carica papaya HOM05D004263 ORTHO05D004931 7.0e-23 111.7 80 77.5
Eucgr.K00914 Eucalyptus grandis HOM05D004263 ORTHO05D004931 7.0e-23 111.7 80 77.5
MD17G1084700 Malus domestica HOM05D004263 ORTHO05D004931 7.0e-23 111.7 80 77.5
Oeu001693.1 Olea europaea HOM05D004263 ORTHO05D004931 7.0e-23 111.7 80 77.5
Oeu001695.1 Olea europaea HOM05D004263 ORTHO05D004931 7.0e-23 111.7 80 77.5
HanXRQChr07g0200651 Helianthus annuus HOM05D004263 ORTHO05D004931 9.2e-23 111.3 80 77.5
Phvul.005G107700 Phaseolus vulgaris HOM05D004263 ORTHO05D004931 9.2e-23 111.3 80 77.5
AL1G23830 Arabidopsis lyrata HOM05D004263 ORTHO05D004931 1.2e-22 110.9 80 76.2
AT1G12470 Arabidopsis thaliana HOM05D004263 ORTHO05D004931 1.2e-22 110.9 80 76.2
A06p09160 Brassica napus HOM05D004263 ORTHO05D004931 1.2e-22 110.9 80 76.2
BraA06t24102Z Brassica rapa HOM05D004263 ORTHO05D004931 1.2e-22 110.9 80 76.2
Carub.0001s1218 Capsella rubella HOM05D004263 ORTHO05D004931 1.2e-22 110.9 80 76.2
CARHR012770 Cardamine hirsuta HOM05D004263 ORTHO05D004931 1.2e-22 110.9 80 76.2
Glyma.12G201100 Glycine max HOM05D004263 ORTHO05D004931 1.2e-22 110.9 80 76.2
Glyma.13G301100 Glycine max HOM05D004263 ORTHO05D004931 1.2e-22 110.9 80 76.2
Sp1g11070 Schrenkiella parvula HOM05D004263 ORTHO05D004931 1.2e-22 110.9 80 76.2
BcaB03g13185 Brassica carinata HOM05D004263 ORTHO05D004931 1.6e-22 110.5 80 75.0
A08p32810 Brassica napus HOM05D004263 ORTHO05D004931 1.6e-22 110.5 80 75.0
C08p15450 Brassica napus HOM05D004263 ORTHO05D004931 1.6e-22 110.5 80 75.0
BolC8t49173H Brassica oleracea HOM05D004263 ORTHO05D004931 1.6e-22 110.5 80 75.0
BraA08t35204Z Brassica rapa HOM05D004263 ORTHO05D004931 1.6e-22 110.5 80 75.0
CDE05G0585 Ceratophyllum demersum HOM05D004263 ORTHO05D004931 1.6e-22 110.5 80 77.5
Thhalv10006686m.g Eutrema salsugineum HOM05D004263 ORTHO05D004931 1.6e-22 110.5 80 76.2
AUR62034472 Chenopodium quinoa HOM05D004263 ORTHO05D004931 2.0e-22 110.2 80 76.2
AUR62041769 Chenopodium quinoa HOM05D004263 ORTHO05D004931 2.0e-22 110.2 80 76.2
Nn2g15850 Nelumbo nucifera HOM05D004263 ORTHO05D004931 2.7e-22 109.8 80 77.5
TWI75G0058 Tripterygium wilfordii HOM05D004263 ORTHO05D004931 3.5e-22 109.4 80 76.2
HPP92_004167 Vanilla planifolia HOM05D004263 ORTHO05D004931 3.5e-22 109.4 80 76.2
CSS0039065 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 7.8e-22 108.2 80 76.2
BcaC05g25186 Brassica carinata HOM05D004263 ORTHO05D004931 1.0e-21 107.8 80 75.0
C05p10740 Brassica napus HOM05D004263 ORTHO05D004931 1.0e-21 107.8 80 75.0
ClCG02G001300 Citrullus lanatus HOM05D004263 ORTHO05D004931 1.3e-21 107.5 80 75.0
MELO3C018764.2 Cucumis melo HOM05D004263 ORTHO05D004931 1.3e-21 107.5 80 75.0
CsaV3_7G004120 Cucumis sativus L. HOM05D004263 ORTHO05D004931 1.3e-21 107.5 80 75.0
BolC5t29815H Brassica oleracea HOM05D004263 ORTHO05D004931 1.7e-21 107.1 80 75.0
Medtr8g063380 Medicago truncatula HOM05D004263 ORTHO05D004931 2.3e-21 106.7 80 76.2
Sed0028127 Sechium edule HOM05D004263 ORTHO05D004931 2.3e-21 106.7 80 75.0
Sc08g0004410 Simmondsia chinensis HOM05D004263 ORTHO05D004931 5.0e-21 105.5 80 73.8
Medtr5g026090 Medicago truncatula HOM05D004263 ORTHO05D004931 8.6e-21 104.8 80 75.0
Os08g0178100 Oryza sativa ssp. japonica HOM05D004263 ORTHO05D004931 2.5e-20 103.2 80 72.5
Pp3c14_1240 Physcomitrium patens HOM05D004263 ORTHO05D004931 2.5e-20 103.2 80 70.0
ATR0737G173 Amborella trichopoda HOM05D004263 ORTHO05D004931 4.3e-20 102.4 66 83.3
Zm00001eb412950 Zea mays HOM05D004263 ORTHO05D004931 1.2e-19 100.9 80 71.2
Mapoly0011s0120 Marchantia polymorpha HOM05D004263 ORTHO05D004931 1.8e-18 97.1 81 67.9
Atru.chr6.3077 Acer truncatum HOM05D004263 ORTHO05D004931 1.2e-17 94.4 75 70.7
AagrBONN_evm.TU.Sc2ySwM_228.3812 Anthoceros agrestis HOM05D004263 ORTHO05D004931 1.2e-17 94.4 80 66.2
SMO239G0082 Selaginella moellendorffii HOM05D004263 ORTHO05D004931 1.5e-17 94.0 80 63.8
SEGI_16142 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 5.8e-17 92.0 59 83.1
CBR_g50947 Chara braunii HOM05D004263 ORTHO05D004931 8.3e-16 88.2 84 59.5
Cfa010655 Carpinus fangiana HOM05D004263 ORTHO05D004931 1.1e-15 87.8 80 63.8
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 1.1e-15 87.8 80 63.8
Haze_13086 Corylus avellana HOM05D004263 ORTHO05D004931 1.1e-15 87.8 80 63.8
Cfa014543 Carpinus fangiana HOM05D004263 ORTHO05D004931 7.0e-15 85.1 80 62.5


User provided reference genes

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