Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009938 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.6e-43 178.3 90 100.0
CSS0049413 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.9e-26 120.9 91 72.5
CSS0042171 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.2e-25 118.2 74 79.7
CSS0025354 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.8e-24 113.6 74 74.3
CSS0002016 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.3e-23 112.8 74 74.3
CSS0046979 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.0e-23 111.7 75 70.7
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.1e-23 110.9 74 71.6
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.6e-23 110.5 74 71.6
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.6e-23 110.5 74 71.6
CSS0009610 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.1e-22 109.8 74 71.6
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.5e-22 109.4 74 70.3
CSS0035882 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.5e-22 109.4 74 71.6
CSS0018761 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.9e-22 109.0 74 73.0
CSS0047666 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.2e-21 104.0 74 71.6
CSS0001150 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.4e-20 102.8 74 68.9
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.9e-18 94.4 74 64.9
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.4e-17 92.0 74 63.5
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.2e-17 91.3 74 63.5
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.4e-17 90.9 77 58.4
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.7e-16 88.6 77 57.1
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.5e-16 88.2 63 66.7
CSS0041454 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.0e-15 85.1 74 54.1
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.1e-14 83.2 77 55.8
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 1.4e-12 76.3 62 56.5
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 1.8e-12 75.9 62 56.5
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 2.4e-12 75.5 62 56.5
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 2.0e-11 72.4 62 53.2
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 4.4e-11 71.2 62 53.2
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 5.8e-11 70.9 63 50.8
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 7.6e-11 70.5 62 54.8
Psat0s1792g0040 Pisum sativum HOM05D000659 ORTHO05D000505 9.9e-11 70.1 62 53.2
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 9.9e-11 70.1 62 56.5
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.8e-10 68.2 63 49.2
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.9e-10 67.8 64 46.9
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.9e-10 67.8 77 45.5
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-09 66.6 63 50.8
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.4e-09 66.2 63 49.2
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.9e-09 65.9 57 50.9
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.2e-09 64.7 63 47.6
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.4e-09 64.3 63 47.6
Psat5g096800 Pisum sativum HOM05D007230 ORTHO05D004756 5.4e-09 64.3 53 54.7
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.4e-09 64.3 51 58.8
MELO3C030889.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.6e-08 62.8 55 54.5
MELO3C032600.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.7e-08 62.0 55 50.9
MELO3C029643.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.1e-07 57.8 63 46.0
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.1e-06 56.6 63 49.2
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.3e-06 54.7 63 49.2
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 5.6e-06 54.3 63 46.0
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 7.3e-06 53.9 46 52.2


User provided reference genes

Program Settings