Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 4.0e-279 964.1 498 100.0
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 4.4e-217 758.1 497 78.9
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 1.8e-215 752.7 499 77.8
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 2.9e-184 649.0 496 68.3
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.1e-183 647.1 492 67.1
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 2.7e-182 642.5 492 66.7
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 3.3e-180 635.6 503 66.6
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.2e-179 633.6 492 66.5
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 2.8e-179 632.5 437 74.1
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 1.1e-178 630.6 510 65.9
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 1.4e-178 630.2 506 66.0
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 3.1e-178 629.0 494 66.2
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 3.4e-177 625.5 496 65.5
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 1.7e-176 623.2 447 70.2
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 8.3e-176 620.9 506 64.4
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 1.4e-175 620.2 524 63.2
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 3.5e-174 615.5 492 64.2
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 7.8e-174 614.4 493 63.5
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 8.6e-173 610.9 499 63.5
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 1.5e-172 610.1 494 63.4
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 1.9e-172 609.8 497 65.0
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 4.3e-172 608.6 498 62.4
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 7.3e-172 607.8 498 63.5
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 1.6e-171 606.7 495 63.4
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 8.1e-171 604.4 500 63.2
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 8.1e-171 604.4 506 62.8
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 4.0e-170 602.1 471 66.7
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 3.4e-169 599.0 497 62.8
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 9.9e-169 597.4 501 64.3
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 2.2e-168 596.3 512 62.7
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.4e-167 593.6 444 68.7
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 3.2e-167 592.4 495 62.2
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 5.4e-167 591.7 496 61.7
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 2.7e-166 589.3 496 61.5
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 7.8e-166 587.8 497 61.6
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 7.8e-166 587.8 500 59.4
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 6.6e-165 584.7 500 59.0
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 4.3e-164 582.0 500 61.8
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 2.1e-163 579.7 497 59.8
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 3.6e-163 578.9 396 74.2
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 4.7e-163 578.6 495 62.2
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 4.0e-162 575.5 366 80.6
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 1.5e-161 573.5 506 61.1
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 1.5e-161 573.5 499 59.1
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 7.6e-161 571.2 499 58.3
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 6.4e-160 568.2 496 59.9
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 1.1e-159 567.4 512 61.9
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 1.4e-159 567.0 499 60.5
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 1.9e-159 566.6 494 59.5
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 1.6e-158 563.5 492 60.8
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 1.6e-158 563.5 493 61.3
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 1.0e-157 560.8 496 58.7
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 3.9e-157 558.9 505 57.8
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 3.9e-157 558.9 492 61.6
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 8.7e-157 557.8 485 62.1
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 2.5e-156 556.2 472 61.2
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 4.3e-156 555.4 507 57.6
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 5.6e-156 555.1 471 60.7
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 4.8e-155 552.0 493 59.6
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 6.9e-154 548.1 525 55.6
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 3.4e-153 545.8 497 60.4
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 4.9e-152 542.0 467 58.9
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 2.4e-151 539.7 574 53.5
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 7.1e-151 538.1 493 58.8
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 2.7e-150 536.2 483 59.4
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.0e-149 534.3 501 57.7
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 1.3e-149 533.9 412 65.8
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 4.3e-148 528.9 406 65.0
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 4.3e-148 528.9 451 60.8
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 2.4e-146 523.1 500 57.4
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 2.6e-145 519.6 495 55.6
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 4.5e-145 518.8 503 55.1
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 2.9e-144 516.2 495 56.2
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 2.7e-142 509.6 428 62.1
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 3.5e-142 509.2 497 56.5
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 4.6e-142 508.8 494 54.9
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 1.8e-141 506.9 505 53.7
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 8.7e-141 504.6 532 52.1
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 1.1e-140 504.2 497 56.3
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 4.3e-140 502.3 494 55.7
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 8.1e-139 498.0 493 55.4
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 8.1e-139 498.0 496 54.6
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 1.4e-138 497.3 494 55.1
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 6.9e-138 495.0 496 54.6
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 3.8e-136 489.2 499 53.7
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 1.9e-135 486.9 495 55.6
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.6e-134 483.8 548 51.3
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 6.0e-134 481.9 496 53.8
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 7.9e-134 481.5 496 53.8
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 2.3e-133 479.9 494 52.2
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 1.9e-132 476.9 497 53.7
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 2.1e-131 473.4 498 52.8
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 2.1e-131 473.4 498 52.8
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 2.4e-130 469.9 354 70.3
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 2.5e-127 459.9 394 60.7
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 1.9e-124 450.3 361 63.2
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 1.5e-121 440.7 363 62.5
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 4.5e-121 439.1 493 48.5
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.0e-120 438.0 493 48.5
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 4.8e-115 419.1 403 55.3
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 2.6e-108 396.7 501 47.5
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 4.8e-107 392.5 400 51.5
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 2.4e-106 390.2 498 45.6
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 1.7e-104 384.0 494 46.2
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 4.2e-95 352.8 247 71.7
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 4.4e-76 289.7 431 40.6
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 7.0e-74 282.3 502 37.3
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 8.0e-70 268.9 184 72.8
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.0e-69 268.5 237 61.6
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 7.5e-68 262.3 276 51.8
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.7e-67 261.2 289 49.8
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 1.1e-66 258.5 174 73.6
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 1.1e-58 231.9 348 42.0
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 9.2e-58 228.8 279 45.9
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 4.3e-55 219.9 411 36.7
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 9.6e-47 192.2 134 69.4
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 4.4e-44 183.3 135 66.7
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 1.7e-43 181.4 108 80.6
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 7.1e-42 176.0 243 42.0
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 2.1e-41 174.5 289 40.5
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 3.9e-40 170.2 174 55.2
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 7.6e-36 156.0 381 30.4
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 3.8e-35 153.7 131 61.8
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 5.4e-34 149.8 343 32.4
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.1e-31 142.1 261 36.0
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 2.8e-30 137.5 139 54.0
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 3.6e-30 137.1 162 50.6
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 6.4e-27 126.3 137 53.3
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 2.4e-26 124.4 109 62.4
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 3.9e-16 90.5 445 22.2
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 5.3e-13 80.1 109 48.6
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 5.3e-13 80.1 110 39.1
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 8.5e-11 72.8 88 56.8
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 8.5e-11 72.8 88 56.8


User provided reference genes

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