Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.1e-204 714.5 370 100.0
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.9e-203 710.7 370 99.5
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 1.1e-164 583.6 366 80.1
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 2.4e-164 582.4 368 80.2
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 4.6e-163 578.2 379 77.6
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 5.6e-161 571.2 366 79.2
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 3.8e-149 531.9 366 74.6
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 3.0e-146 522.3 367 73.0
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.3e-144 516.9 364 72.0
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 2.1e-144 516.2 364 71.7
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.8e-144 515.8 364 71.7
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 2.4e-143 512.7 365 71.2
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 3.8e-141 505.4 366 68.3
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 1.9e-140 503.1 364 70.6
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 2.5e-140 502.7 325 80.6
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 2.5e-140 502.7 364 69.5
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 4.2e-140 501.9 366 68.9
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 3.5e-139 498.8 364 68.4
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 4.6e-139 498.4 371 69.3
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 3.0e-138 495.7 364 71.2
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 7.4e-137 491.1 364 67.3
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 9.7e-137 490.7 364 67.0
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 2.8e-136 489.2 369 68.0
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 4.8e-136 488.4 364 67.3
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 1.1e-135 487.3 362 66.9
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 1.8e-135 486.5 364 68.7
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 6.9e-135 484.6 364 67.6
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 1.2e-134 483.8 366 65.3
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 5.0e-133 478.4 366 65.6
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 1.4e-132 476.9 364 66.8
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 2.1e-131 473.0 364 66.8
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 3.6e-131 472.2 364 65.9
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.0e-130 470.7 381 63.5
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 5.1e-130 468.4 368 64.4
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 6.3e-128 461.5 363 66.7
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 1.4e-127 460.3 365 63.6
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 3.1e-127 459.1 363 64.2
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 3.1e-127 459.1 363 64.2
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 3.1e-127 459.1 366 65.0
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 4.1e-127 458.8 366 65.3
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 4.1e-127 458.8 331 68.9
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 9.1e-127 457.6 365 65.8
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 1.2e-126 457.2 366 64.5
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 1.2e-126 457.2 365 65.5
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 2.6e-126 456.1 363 66.4
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 1.0e-125 454.1 364 63.2
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 3.8e-125 452.2 364 62.4
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 5.0e-125 451.8 365 63.3
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 8.5e-125 451.1 365 62.2
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 4.7e-123 445.3 368 62.0
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 2.3e-122 443.0 363 63.9
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 3.0e-122 442.6 364 62.4
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 1.1e-121 440.7 364 61.5
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 1.1e-121 440.7 363 63.6
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 5.7e-121 438.3 382 60.5
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 2.2e-120 436.4 366 60.7
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 4.8e-120 435.3 364 61.5
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 4.8e-120 435.3 364 61.8
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 8.2e-120 434.5 371 62.0
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 1.4e-119 433.7 366 61.2
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.8e-119 433.3 363 63.9
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 3.1e-119 432.6 366 62.0
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 3.1e-119 432.6 387 57.9
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 7.0e-119 431.4 363 63.4
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 4.5e-118 428.7 363 63.1
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 1.0e-117 427.6 367 59.4
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 1.3e-117 427.2 364 59.9
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 1.5e-116 423.7 363 60.9
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 9.4e-116 421.0 364 60.7
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 1.2e-115 420.6 317 69.1
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 2.1e-115 419.9 365 60.0
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 4.7e-115 418.7 363 61.2
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 4.7e-115 418.7 361 62.3
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 2.3e-114 416.4 368 60.3
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 3.0e-114 416.0 365 58.9
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 1.5e-113 413.7 363 59.2
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 2.6e-113 412.9 402 54.7
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 3.3e-113 412.5 364 59.6
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 4.4e-113 412.1 366 57.4
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 1.3e-112 410.6 362 60.2
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 1.7e-112 410.2 367 59.4
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 2.4e-111 406.4 362 58.8
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 4.1e-111 405.6 366 57.7
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 4.1e-111 405.6 362 57.2
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 5.3e-111 405.2 368 56.2
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 9.1e-111 404.4 363 58.7
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 3.5e-110 402.5 313 69.0
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 4.5e-110 402.1 402 54.2
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 5.9e-110 401.7 378 57.1
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 1.3e-109 400.6 366 57.7
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 2.9e-109 399.4 364 57.7
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 1.1e-108 397.5 363 59.2
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 1.1e-108 397.5 364 57.7
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 4.2e-108 395.6 363 57.3
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 5.5e-108 395.2 364 57.7
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 1.6e-107 393.7 364 57.7
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 6.1e-107 391.7 316 63.3
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 1.0e-106 391.0 369 54.7
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 2.3e-106 389.8 481 48.4
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 3.0e-106 389.4 367 55.0
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 6.8e-106 388.3 368 55.2
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 2.6e-105 386.3 402 52.5
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 3.4e-105 386.0 365 56.7
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 4.4e-105 385.6 366 56.6
CSS0022680 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.7e-105 385.2 210 96.7
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 7.5e-105 384.8 364 56.6
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 9.8e-105 384.4 364 56.9
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 4.8e-104 382.1 363 56.2
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 1.4e-103 380.6 362 55.2
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 1.8e-103 380.2 312 64.1
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 3.1e-103 379.4 352 55.7
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 3.1e-103 379.4 354 57.6
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 4.1e-103 379.0 366 56.6
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 5.4e-103 378.6 398 52.8
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 7.0e-103 378.3 349 56.4
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 2.0e-102 376.7 503 45.7
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 3.5e-102 375.9 374 55.1
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 5.9e-102 375.2 281 65.5
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 6.5e-101 371.7 353 56.1
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 1.1e-100 370.9 563 43.3
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 1.5e-100 370.5 353 56.1
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 4.2e-100 369.0 290 64.1
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 2.7e-99 366.3 353 55.5
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 8.8e-98 361.3 368 50.5
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 1.3e-96 357.5 364 54.1
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 6.3e-96 355.1 474 44.5
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 1.1e-95 354.4 364 53.3
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 7.7e-94 348.2 371 51.8
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 1.5e-92 344.0 313 59.7
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 2.5e-92 343.2 313 58.8
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.0e-85 318.9 204 79.9
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.5e-84 317.4 204 79.4
CSS0005213 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.2e-82 308.9 163 98.2
Oeu017507.1 Olea europaea HOM05D002209 ORTHO05D004761 3.4e-81 306.2 207 73.4
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.4e-81 305.8 189 87.8
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 7.5e-81 305.1 298 55.4
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 1.4e-79 300.8 301 54.5
Solyc12g040500.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 2.1e-75 287.0 230 61.7
Sopen12g020100 Solanum pennellii HOM05D002209 ORTHO05D004761 3.6e-75 286.2 210 66.7
CSS0012524 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 6.4e-72 275.4 166 84.9
FAN04G3108 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.2e-70 271.2 206 68.4
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 5.1e-69 265.8 313 49.2
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 8.6e-69 265.0 315 46.3
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 5.2e-66 255.8 200 65.0
Gorai.007G186700 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.1e-63 248.1 164 76.2
Hma1.2p1_0669F.1_g200330 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 1.9e-63 247.3 164 74.4
Gohir.D08G140100 Gossypium hirsutum HOM05D002209 ORTHO05D004761 4.6e-62 242.7 164 75.0
Gorai.008G042300 Gossypium raimondii HOM05D002209 ORTHO05D004761 7.8e-62 241.9 164 74.4
Gorai.004G122400 Gossypium raimondii HOM05D002209 ORTHO05D004761 8.6e-61 238.4 167 73.7
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 1.1e-60 238.0 374 36.6
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 2.1e-59 233.8 339 39.8
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 5.8e-57 225.7 306 45.1
Gohir.D13G126266 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.7e-56 224.2 164 70.7
CSS0050298 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.4e-55 221.1 152 81.6
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 9.3e-55 218.4 373 37.5
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 1.6e-54 217.6 203 56.2
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 2.1e-54 217.2 374 38.0
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 7.8e-54 215.3 378 35.2
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 3.9e-53 213.0 368 36.1
PGSC0003DMG400015821 Solanum tuberosum HOM05D002209 ORTHO05D004761 8.7e-53 211.8 155 67.7
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.7e-48 197.6 371 33.7
GSVIVG01008387001 Vitis vinifera HOM05D002209 ORTHO05D004761 2.2e-48 197.2 164 63.4
Solyc12g040480.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 1.6e-46 191.0 155 59.4
Sopen12g020080 Solanum pennellii HOM05D002209 ORTHO05D004761 1.3e-45 188.0 155 58.7
CSS0034654 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 9.6e-44 181.8 110 86.4
Gorai.008G062000 Gossypium raimondii HOM05D002209 ORTHO05D004761 4.5e-41 172.9 125 68.8
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 2.2e-40 170.6 370 30.3
SEGI_01637 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 2.2e-40 170.6 257 40.9
CAN.G197.13 Capsicum annuum HOM05D002209 ORTHO05D004761 9.3e-39 165.2 122 64.8
PGSC0003DMG400015822 Solanum tuberosum HOM05D002209 ORTHO05D004761 1.8e-37 161.0 132 59.1
ATR0326G049 Amborella trichopoda HOM05D002209 ORTHO05D004761 2.8e-35 153.7 171 46.8
Oeu053224.1 Olea europaea HOM05D002209 ORTHO05D004761 3.1e-34 150.2 133 58.6
Oeu017505.1 Olea europaea HOM05D002209 ORTHO05D004761 6.9e-34 149.1 133 59.4
Os09g0314300 Oryza sativa ssp. japonica HOM05D002209 ORTHO05D004761 1.3e-27 128.3 127 48.0
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 6.9e-18 95.9 251 31.1
AagrBONN_evm.TU.Sc2ySwM_368.2096 Anthoceros agrestis HOM05D002209 ORTHO05D004761 1.1e-15 88.6 267 29.2
Cfa024504 Carpinus fangiana HOM05D002209 ORTHO05D004761 2.7e-06 57.4 409 23.0


User provided reference genes

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