Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009810 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 6.6e-159 563.9 271 100.0
CSS0026212 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 4.6e-144 514.6 271 93.4
CSS0042483 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.6e-123 445.7 268 85.4
CSS0007712 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.3e-119 432.6 265 83.8
CSS0000180 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 6.7e-111 404.4 268 78.7
CSS0013208 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.4e-107 392.1 261 78.9
CSS0005105 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.8e-53 213.0 149 65.1
CSS0037888 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.8e-53 213.0 149 65.1
CSS0039716 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 4.1e-52 209.1 149 63.8
CSS0026970 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 9.2e-52 208.0 149 64.4
RcHm_v2.0_Chr4g0402051 Rosa chinensis HOM05D000791 ORTHO05D000669 1.0e-26 124.8 242 28.9
Rhsim03G0202300 Rhododendron simsii HOM05D017301 ORTHO05D000669 4.3e-25 119.4 245 31.8
Dinv31455 Davidia involucrata HOM05D000791 ORTHO05D000669 4.4e-22 109.4 248 28.6
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.7e-21 107.5 241 27.0
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.9e-21 106.7 245 27.3
Dinv01181 Davidia involucrata HOM05D000791 ORTHO05D000669 3.8e-21 106.3 237 27.0
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 1.4e-20 104.4 246 26.8
MBI15_g15098_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.4e-20 103.6 245 27.8
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 3.2e-20 103.2 238 28.2
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.4e-20 102.4 245 26.9
MBI16_g34343_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.4e-20 102.4 241 26.1
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 7.1e-20 102.1 237 27.0
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 1.2e-19 101.3 245 29.8
vmacro01281 Vaccinium macrocarpon HOM05D017301 ORTHO05D000669 1.6e-19 100.9 195 32.3
MBI15_g13723_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.7e-19 100.1 238 26.9
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.7e-19 100.1 245 26.9
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.0e-19 99.0 245 26.9
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-18 97.8 242 29.3
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 6.6e-18 95.5 241 25.7
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.7e-18 95.1 245 27.3
Dinv24767 Davidia involucrata HOM05D000791 ORTHO05D000669 2.5e-17 93.6 217 28.6
FvH4_3g22812 Fragaria vesca HOM05D023520 ORTHO05D025365 9.6e-17 91.7 141 29.8
FAN20G1055 Fragaria x ananassa HOM05D008705 ORTHO05D001863 1.2e-16 91.3 236 26.7
Dinv16095 Davidia involucrata HOM05D000791 ORTHO05D000669 4.7e-16 89.4 218 27.1
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.7e-16 89.4 241 25.3
MBI09_g39165_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.1e-16 88.6 241 25.7
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 1.1e-15 88.2 240 26.7
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 1.8e-15 87.4 252 22.6
FAN09G3738 Fragaria x ananassa HOM05D008705 ORTHO05D001863 2.4e-15 87.0 236 26.3
Dinv18594 Davidia involucrata HOM05D000791 ORTHO05D000669 1.2e-14 84.7 264 23.5
MBI17_g17142_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.2e-14 84.7 240 27.9
Lj1A283G17 Lonicera japonica HOM05D008705 ORTHO05D000669 1.5e-14 84.3 145 33.1
RcHm_v2.0_Chr1g0381191 Rosa chinensis HOM05D008705 ORTHO05D000669 1.5e-14 84.3 193 27.5
RcHm_v2.0_Chr7g0214031 Rosa chinensis HOM05D008705 ORTHO05D000669 1.5e-14 84.3 193 27.5
MBI19_g46209_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.6e-14 83.6 241 26.1
Dinv12412 Davidia involucrata HOM05D010418 ORTHO05D000669 3.4e-14 83.2 152 29.6
FAN17G1365 Fragaria x ananassa HOM05D008705 ORTHO05D000669 3.4e-14 83.2 240 25.0
Glyma.08G123400 Glycine max HOM05D008291 ORTHO05D000669 5.8e-14 82.4 230 25.2
MBI11_g23002_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.6e-14 82.0 242 26.0
FvH4_4g05492 Fragaria vesca HOM05D008705 ORTHO05D000669 1.7e-13 80.9 153 27.5
FvH4_2g08145 Fragaria vesca HOM05D008705 ORTHO05D000669 2.2e-13 80.5 153 27.5
CiPaw.14G126400 Carya illinoinensis HOM05D003120 ORTHO05D003568 6.4e-13 79.0 216 27.3
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.4e-13 78.6 254 25.6
TPR.G6754 Trifolium pratense HOM05D008291 ORTHO05D003568 1.1e-12 78.2 239 23.8
Glyma.05G165700 Glycine max HOM05D008291 ORTHO05D000669 1.4e-12 77.8 230 25.2
MBI13_g41510_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.9e-12 77.4 201 24.4
Cfa009670 Carpinus fangiana HOM05D003120 ORTHO05D003568 3.2e-12 76.6 213 24.9
PSO210G0630 Papaver somniferum HOM05D030578 ORTHO05D000669 3.2e-12 76.6 255 21.6
FAN15G0639 Fragaria x ananassa HOM05D008705 ORTHO05D000669 7.1e-12 75.5 160 25.6
MBI01_g39588_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.1e-12 75.5 279 23.3
FAN09G1129 Fragaria x ananassa HOM05D008705 ORTHO05D000669 9.3e-12 75.1 156 25.6
CSS0028785 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.6e-11 74.3 66 57.6
MBI11_g22671_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.1e-11 73.9 217 24.4
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.7e-11 73.6 212 23.6
FAN20G2701 Fragaria x ananassa HOM05D008705 ORTHO05D000669 6.0e-11 72.4 203 24.1
Dinv25294 Davidia involucrata HOM05D010418 ORTHO05D000669 7.8e-11 72.0 116 31.0
MBI16_g20833_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.8e-11 72.0 218 24.8
CSS0034948 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.0e-10 71.6 65 56.9
Migut.I00328 Erythranthe guttata HOM05D023261 ORTHO05D000222 1.0e-10 71.6 250 24.0
MBI16_g11620_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.0e-10 71.6 239 25.5
PSO724G0226 Papaver somniferum HOM05D000791 ORTHO05D000669 1.3e-10 71.2 244 23.0
MBI12_g34835_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.3e-10 70.5 223 24.7
MBI18_g01981_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.3e-10 70.5 216 21.3
PSO832G4275 Papaver somniferum HOM05D008705 ORTHO05D000669 3.0e-10 70.1 148 27.0
MBI18_g07911_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.9e-10 69.7 236 23.3
MBI14_g38741_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.1e-10 69.3 156 28.8
MBI11_g21812_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.6e-10 68.9 156 28.8
Aqoxy4G01021 Aquilegia oxysepala HOM05D000791 ORTHO05D000669 1.1e-09 68.2 200 22.5
Dinv02106 Davidia involucrata HOM05D000791 ORTHO05D000669 1.1e-09 68.2 176 23.9
HanXRQChr03g0064951 Helianthus annuus HOM05D005763 ORTHO05D005970 1.1e-09 68.2 241 23.7
MBI12_g38023_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-09 68.2 238 23.5
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.1e-09 68.2 248 23.0
Dinv03037 Davidia involucrata HOM05D010418 ORTHO05D000669 1.5e-09 67.8 151 27.2
MBI14_g07056_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-09 67.8 147 29.9
MBI14_g16528_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-09 67.8 147 29.9
RcHm_v2.0_Chr1g0345631 Rosa chinensis HOM05D008705 ORTHO05D000669 1.5e-09 67.8 108 31.5
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.5e-09 67.8 248 23.0
MBI15_g01162_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.9e-09 67.4 147 30.6
Dinv06647 Davidia involucrata HOM05D010418 ORTHO05D000669 2.5e-09 67.0 148 27.7
PSO384G0881 Papaver somniferum HOM05D017761 ORTHO05D000669 2.5e-09 67.0 144 31.2
MBI07_g41667_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.3e-09 66.6 147 29.9
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 3.3e-09 66.6 215 26.5
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 4.3e-09 66.2 240 23.8
MBI12_g42096_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.3e-09 66.2 246 22.4
MBI11_g33696_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.6e-09 65.9 147 29.9
MBI15_g00064_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.6e-09 65.9 213 23.9
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 5.6e-09 65.9 255 24.3
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 7.3e-09 65.5 240 23.8
MBI13_g26213_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.6e-09 65.1 147 29.3
MD09G1027200 Malus domestica HOM05D005763 ORTHO05D005970 9.6e-09 65.1 237 24.1
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.3e-08 64.7 240 23.3
RcHm_v2.0_Chr2g0106131 Rosa chinensis HOM05D008705 ORTHO05D000669 2.1e-08 63.9 77 40.3
RcHm_v2.0_Chr3g0476041 Rosa chinensis HOM05D008705 ORTHO05D000669 2.1e-08 63.9 75 40.0
Sopen10g007560 Solanum pennellii HOM05D008291 ORTHO05D016169 2.8e-08 63.5 203 24.1
MBI03_g12026_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.8e-08 62.8 150 24.0
MBI08_g18899_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.8e-08 62.8 156 26.9
Rhsim09G0074300 Rhododendron simsii HOM05D000791 ORTHO05D000669 4.8e-08 62.8 219 25.1
FAN11G3939 Fragaria x ananassa HOM05D008485 ORTHO05D009647 6.2e-08 62.4 249 25.3
FAN23G3051 Fragaria x ananassa HOM05D008485 ORTHO05D009647 6.2e-08 62.4 249 25.3
MBI05_g08210_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.2e-08 62.4 156 27.6
Rhsim02G0136200 Rhododendron simsii HOM05D017301 ORTHO05D000669 6.2e-08 62.4 79 38.0
RcHm_v2.0_Chr6g0264941 Rosa chinensis HOM05D008485 ORTHO05D009647 6.2e-08 62.4 208 25.0
TWI73G0990 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 6.2e-08 62.4 188 23.4
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.2e-08 62.4 230 24.3
MBI09_g18479_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.8e-07 60.8 248 23.8
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-07 60.8 214 22.9
Os02g0583500 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 1.8e-07 60.8 243 25.1
Os04g0519100 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 1.8e-07 60.8 242 25.6
Os11g0519100 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 1.8e-07 60.8 243 25.1
Dinv09859 Davidia involucrata HOM05D000791 ORTHO05D000669 2.4e-07 60.5 181 22.1
MBI05_g11193_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.4e-07 60.5 147 28.6
MBI14_g38483_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.4e-07 60.5 237 23.6
FAN13G3330 Fragaria x ananassa HOM05D008485 ORTHO05D009647 3.1e-07 60.1 249 24.9
FAN23G0398 Fragaria x ananassa HOM05D008485 ORTHO05D009647 3.1e-07 60.1 249 24.9
RcHm_v2.0_Chr1g0329081 Rosa chinensis HOM05D008485 ORTHO05D009647 3.1e-07 60.1 208 24.5
ECA096G0001 Erigeron canadensis HOM05D008488 ORTHO05D000385 4.0e-07 59.7 226 21.2
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 5.3e-07 59.3 254 24.4
MBI12_g22447_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.3e-07 59.3 153 26.1
Dinv00424 Davidia involucrata HOM05D010418 ORTHO05D000669 6.9e-07 58.9 116 30.2
Dinv03964 Davidia involucrata HOM05D010418 ORTHO05D000669 6.9e-07 58.9 116 30.2
MBI19_g39984_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.9e-07 58.9 147 27.2
MBI14_g32811_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.0e-07 58.5 147 29.3
MBI18_g39301_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.0e-07 58.5 143 27.3
RcHm_v2.0_Chr2g0102381 Rosa chinensis HOM05D008705 ORTHO05D000669 9.0e-07 58.5 70 38.6
MBI14_g38387_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.2e-06 58.2 156 26.3
Solyc12g082720.1 Solanum lycopersicum HOM05D008291 ORTHO05D003568 1.2e-06 58.2 150 26.0
MBI19_g11511_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-06 57.8 147 27.2
MBI14_g01383_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.6e-06 57.0 244 22.1
Lj4A276T51 Lonicera japonica HOM05D008705 ORTHO05D000669 3.4e-06 56.6 148 26.4
MBI16_g22304_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.4e-06 56.6 147 29.3
Dinv18123 Davidia involucrata HOM05D010418 ORTHO05D000669 4.5e-06 56.2 131 24.4
Prupe.5G199500 Prunus persica HOM05D008985 ORTHO05D000222 4.5e-06 56.2 211 22.3
vmacro14701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 4.5e-06 56.2 192 24.5
vmacro14771 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 4.5e-06 56.2 192 24.5
FvH4_4g15892 Fragaria vesca HOM05D008705 ORTHO05D000669 7.6e-06 55.5 73 38.4
MBI09_g42525_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.6e-06 55.5 156 27.6
MBI15_g45923_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.6e-06 55.5 143 27.3
FAN06G0059 Fragaria x ananassa HOM05D009879 ORTHO05D009647 9.9e-06 55.1 113 33.6
MBI18_g25260_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.9e-06 55.1 218 23.4
MD11G1169500 Malus domestica HOM05D008985 ORTHO05D000222 9.9e-06 55.1 203 20.7
MD15G1434900 Malus domestica HOM05D005763 ORTHO05D005970 9.9e-06 55.1 246 23.2
RcHm_v2.0_Chr1g0346821 Rosa chinensis HOM05D009879 ORTHO05D009647 9.9e-06 55.1 114 32.5


User provided reference genes

Program Settings