Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009799 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 2.1e-237 825.5 466 100.0
CSS0035138 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 2.3e-236 822.0 466 99.6
Actinidia16258 Actinidia chinensis HOM05D005230 ORTHO05D006506 8.8e-212 740.3 459 91.9
Actinidia06848 Actinidia chinensis HOM05D005230 ORTHO05D006506 2.6e-211 738.8 459 91.9
Rhsim13G0231000 Rhododendron simsii HOM05D005230 ORTHO05D006506 7.5e-211 737.3 459 90.8
Dinv29329 Davidia involucrata HOM05D005230 ORTHO05D006506 1.9e-206 722.6 466 88.0
Nn7g36961 Nelumbo nucifera HOM05D005230 ORTHO05D006506 3.1e-201 705.3 467 85.9
Prupe.4G269500 Prunus persica HOM05D005230 ORTHO05D006506 9.1e-201 703.7 462 86.8
GSVIVG01020254001 Vitis vinifera HOM05D005230 ORTHO05D006506 1.2e-197 693.3 462 85.9
Cc01_g07300 Coffea canephora HOM05D005230 ORTHO05D006506 4.7e-197 691.4 461 85.0
Manes.05G199900 Manihot esculenta HOM05D005230 ORTHO05D006506 4.7e-197 691.4 462 85.3
Oeu025950.1 Olea europaea HOM05D005230 ORTHO05D006506 4.0e-196 688.3 459 83.0
CANSAT54G1170 Cannabis sativa HOM05D005230 ORTHO05D006506 2.0e-195 686.0 462 83.8
MD03G1163000 Malus domestica HOM05D005230 ORTHO05D006506 7.5e-195 684.1 461 84.6
Lsat_1_v5_gn_2_32160 Lactuca sativa HOM05D005230 ORTHO05D006506 9.8e-195 683.7 459 84.1
CiPaw.13G147000 Carya illinoinensis HOM05D005230 ORTHO05D006506 1.3e-194 683.3 462 85.3
ECA238G4724 Erigeron canadensis HOM05D005230 ORTHO05D006506 2.2e-194 682.6 459 82.8
Eucgr.B03758 Eucalyptus grandis HOM05D005230 ORTHO05D006506 4.1e-193 678.3 462 83.8
CAN.G280.6 Capsicum annuum HOM05D005230 ORTHO05D006506 1.2e-192 676.8 461 83.9
QL01p016185 Quercus lobata HOM05D005230 ORTHO05D006506 1.1e-190 670.2 462 84.2
Sopen11g029740 Solanum pennellii HOM05D005230 ORTHO05D006506 1.9e-190 669.5 461 83.5
PGSC0003DMG400027416 Solanum tuberosum HOM05D005230 ORTHO05D006506 1.9e-190 669.5 461 83.5
TWI75G0256 Tripterygium wilfordii HOM05D005230 ORTHO05D006506 1.9e-190 669.5 462 81.0
Haze_23295 Corylus avellana HOM05D005230 ORTHO05D006506 2.5e-190 669.1 462 84.2
Solyc11g072090.2 Solanum lycopersicum HOM05D005230 ORTHO05D006506 7.3e-190 667.5 461 83.3
Aqoxy1G00076 Aquilegia oxysepala HOM05D005230 ORTHO05D006506 9.5e-190 667.2 463 81.2
Potri.009G066400 Populus trichocarpa HOM05D005230 ORTHO05D006506 4.7e-189 664.8 459 79.5
DCAR_031608 Daucus carota HOM05D005230 ORTHO05D006506 6.1e-189 664.5 461 80.7
Potri.001G271800 Populus trichocarpa HOM05D005230 ORTHO05D006506 3.1e-188 662.1 460 80.4
Sabra16G0167000 Salix brachista HOM05D005230 ORTHO05D006506 3.1e-188 662.1 460 80.4
MSTRG.21320 Avicennia marina HOM05D005230 ORTHO05D006506 4.4e-187 658.3 461 80.9
Atru.chr3.2845 Acer truncatum HOM05D005230 ORTHO05D006506 9.8e-187 657.1 464 74.8
Cpa.g.sc34.203 Carica papaya HOM05D005230 ORTHO05D006506 1.7e-186 656.4 461 81.8
Manes.01G177100 Manihot esculenta HOM05D005230 ORTHO05D006506 1.7e-186 656.4 463 81.6
Oeu032061.2 Olea europaea HOM05D005230 ORTHO05D006506 2.9e-186 655.6 492 77.4
Sabra09G0049500 Salix brachista HOM05D005230 ORTHO05D006506 8.3e-186 654.1 459 79.3
TWI31G0483 Tripterygium wilfordii HOM05D005230 ORTHO05D006506 1.1e-185 653.7 462 80.7
COL.COLO4_33253 Corchorus olitorius HOM05D005230 ORTHO05D006506 4.1e-185 651.7 462 80.3
HanXRQChr13g0402151 Helianthus annuus HOM05D005230 ORTHO05D006506 4.1e-185 651.7 458 79.7
Lj4g0004497 Lotus japonicus HOM05D005230 ORTHO05D006506 7.0e-185 651.0 461 80.0
Peaxi162Scf00978g00317 Petunia axillaris HOM05D005230 ORTHO05D006506 2.0e-184 649.4 461 80.3
Hund07409 Selenicereus undatus HOM05D005230 ORTHO05D006506 2.0e-184 649.4 466 79.6
Ciclev10015197m.g Citrus clementina HOM05D005230 ORTHO05D006506 4.6e-184 648.3 465 80.6
SGA_v2.0_scaffold29G12151 Striga asiatica HOM05D005230 ORTHO05D006506 1.3e-183 646.7 461 77.9
Thecc.09G252100 Theobroma cacao HOM05D005230 ORTHO05D006506 3.0e-183 645.6 462 80.1
PSO339G0973 Papaver somniferum HOM05D005230 ORTHO05D006506 7.3e-182 641.0 459 79.3
PSO384G0943 Papaver somniferum HOM05D005230 ORTHO05D006506 1.2e-181 640.2 459 79.3
Cfa009930 Carpinus fangiana HOM05D005230 ORTHO05D006506 1.6e-181 639.8 441 84.1
Haze_23300 Corylus avellana HOM05D005230 ORTHO05D006506 1.6e-181 639.8 505 70.1
arahy.Tifrunner.gnm1.ann1.554KFZ Arachis hypogaea HOM05D005230 ORTHO05D006506 6.2e-181 637.9 460 73.0
arahy.Tifrunner.gnm1.ann1.YWPQ0A Arachis hypogaea HOM05D005230 ORTHO05D006506 6.2e-181 637.9 460 73.0
SalBow6G0054 Salvia bowleyana HOM05D005230 ORTHO05D006506 1.4e-180 636.7 483 75.8
Migut.D00707 Erythranthe guttata HOM05D005230 ORTHO05D006506 4.0e-180 635.2 475 77.5
Lalb_Chr07g0186541 Lupinus albus HOM05D005230 ORTHO05D006506 4.0e-180 635.2 460 79.6
ClCG03G014290 Citrullus lanatus HOM05D005230 ORTHO05D006506 8.9e-180 634.0 462 79.4
Glyma.08G113500 Glycine max HOM05D005230 ORTHO05D006506 1.2e-179 633.6 460 80.0
FvH4_1g25390 Fragaria vesca HOM05D005230 ORTHO05D006506 1.5e-179 633.3 462 78.1
FAN23G0348 Fragaria x ananassa HOM05D005230 ORTHO05D006506 1.5e-179 633.3 462 78.6
Duzib168G0825 Durio zibethinus HOM05D005230 ORTHO05D006506 2.0e-179 632.9 462 78.4
FAN28G1729 Fragaria x ananassa HOM05D005230 ORTHO05D006506 2.0e-179 632.9 462 78.4
Nitab4.5_0002161g0080 Nicotiana tabacum HOM05D005230 ORTHO05D006506 2.9e-178 629.0 461 79.8
AUR62006575 Chenopodium quinoa HOM05D005230 ORTHO05D006506 4.9e-178 628.2 464 79.7
CsaV3_1G041930 Cucumis sativus L. HOM05D005230 ORTHO05D006506 4.9e-178 628.2 462 79.2
AUR62000229 Chenopodium quinoa HOM05D005230 ORTHO05D006506 8.3e-178 627.5 464 79.3
Glyma.05G155700 Glycine max HOM05D005230 ORTHO05D006506 8.3e-178 627.5 460 79.6
Lj2C810G6 Lonicera japonica HOM05D005230 ORTHO05D006506 1.9e-177 626.3 463 78.0
RcHm_v2.0_Chr2g0123421 Rosa chinensis HOM05D005230 ORTHO05D006506 3.2e-177 625.5 462 77.7
MELO3C015608.2 Cucumis melo HOM05D005230 ORTHO05D006506 7.1e-177 624.4 462 79.0
THA.LOC104811208 Tarenaya hassleriana HOM05D005230 ORTHO05D006506 7.1e-177 624.4 459 78.6
Psat7g073480 Pisum sativum HOM05D005230 ORTHO05D006506 1.6e-176 623.2 460 77.4
TPR.G24369 Trifolium pratense HOM05D005230 ORTHO05D006506 2.1e-176 622.9 459 76.9
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 2.7e-176 622.5 461 77.0
Phvul.002G235800 Phaseolus vulgaris HOM05D005230 ORTHO05D006506 2.7e-176 622.5 460 78.5
VMungo0251G0349 Vigna mungo HOM05D005230 ORTHO05D006506 3.5e-176 622.1 465 78.5
Ca_17953_v3 Cicer arietinum L. HOM05D005230 ORTHO05D006506 1.0e-175 620.5 460 78.7
Sed0024170 Sechium edule HOM05D005230 ORTHO05D006506 1.7e-175 619.8 462 78.4
Duzib150G1312 Durio zibethinus HOM05D005230 ORTHO05D006506 3.0e-175 619.0 462 77.7
Aa31LG1G8850 Aethionema arabicum HOM05D005230 ORTHO05D006506 1.1e-174 617.1 459 75.8
Medtr8g085640 Medicago truncatula HOM05D005230 ORTHO05D006506 1.1e-174 617.1 455 78.0
MBI13_g00890_MAGBIO Magnolia biondii HOM05D005230 ORTHO05D006506 1.7e-167 593.2 467 69.2
EL10Ac4g10073 Beta vulgaris HOM05D005230 ORTHO05D006506 6.6e-167 591.3 465 69.0
FAN26G2809 Fragaria x ananassa HOM05D005230 ORTHO05D006506 7.3e-166 587.8 551 66.6
A02p05570 Brassica napus HOM05D005230 ORTHO05D006506 2.1e-165 586.3 456 75.2
A10p20220 Brassica napus HOM05D005230 ORTHO05D006506 8.1e-165 584.3 461 74.2
ATR0307G025 Amborella trichopoda HOM05D005230 ORTHO05D006506 1.8e-164 583.2 462 74.0
BNapus_Darmor_BZH_scaffold_38p02380 Brassica napus HOM05D005230 ORTHO05D006506 5.2e-164 581.6 456 74.8
BolC2t06957H Brassica oleracea HOM05D005230 ORTHO05D006506 8.9e-164 580.9 456 74.8
BraA02t05508Z Brassica rapa HOM05D005230 ORTHO05D006506 8.9e-164 580.9 456 74.6
Gorai.004G013700 Gossypium raimondii HOM05D005230 ORTHO05D006506 8.9e-164 580.9 462 73.4
Gorai.006G123300 Gossypium raimondii HOM05D005230 ORTHO05D006506 3.4e-163 578.9 462 73.8
BraA10t44093Z Brassica rapa HOM05D005230 ORTHO05D006506 5.8e-163 578.2 466 73.4
vmacro04223 Vaccinium macrocarpon HOM05D005230 ORTHO05D006506 5.8e-163 578.2 495 72.3
Gohir.D08G019200 Gossypium hirsutum HOM05D005230 ORTHO05D006506 9.9e-163 577.4 462 72.9
Gohir.A08G009200 Gossypium hirsutum HOM05D005230 ORTHO05D006506 1.3e-162 577.0 462 73.8
Gohir.D09G105900 Gossypium hirsutum HOM05D005230 ORTHO05D006506 1.9e-161 573.2 462 73.6
CARHR193430 Cardamine hirsuta HOM05D005230 ORTHO05D006506 4.2e-161 572.0 387 75.2
CDE08G0498 Ceratophyllum demersum HOM05D005230 ORTHO05D006506 7.1e-161 571.2 463 64.6
Thhalv10013503m.g Eutrema salsugineum HOM05D005230 ORTHO05D006506 1.2e-160 570.5 389 75.6
Sp6g24920 Schrenkiella parvula HOM05D005230 ORTHO05D006506 3.9e-159 565.5 387 74.4
Gohir.A09G109300 Gossypium hirsutum HOM05D005230 ORTHO05D006506 4.3e-158 562.0 462 71.6
Ah.06g194900 Amaranthus hybridus HOM05D005230 ORTHO05D006506 1.8e-156 556.6 462 71.0
AL6G30990 Arabidopsis lyrata HOM05D005230 ORTHO05D006506 9.0e-156 554.3 389 73.8
GSVIVG01002283001 Vitis vinifera HOM05D005230 ORTHO05D006506 2.6e-155 552.7 401 81.8
Carub.0006s1783 Capsella rubella HOM05D005230 ORTHO05D006506 7.1e-153 544.7 461 70.7
Os06g0338900 Oryza sativa ssp. japonica HOM05D005230 ORTHO05D006506 4.6e-152 542.0 460 69.3
HPP92_016891 Vanilla planifolia HOM05D005230 ORTHO05D006506 4.6e-152 542.0 459 70.8
Nitab4.5_0002567g0160 Nicotiana tabacum HOM05D005230 ORTHO05D006506 6.0e-152 541.6 461 65.5
AT5G19485 Arabidopsis thaliana HOM05D005230 ORTHO05D006506 1.9e-150 536.6 389 71.5
Sc16g0010870 Simmondsia chinensis HOM05D005230 ORTHO05D006506 7.1e-145 518.1 384 79.2
unitig_0.g309 Utricularia gibba HOM05D005230 ORTHO05D006506 1.8e-143 513.5 461 65.7
PGR102G1412 Punica granatum HOM05D005230 ORTHO05D006506 2.8e-141 506.1 461 69.0
SEGI_36393 Sequoiadendron giganteum HOM05D005230 ORTHO05D006506 2.8e-141 506.1 466 65.5
Pp3c16_600 Physcomitrium patens HOM05D005230 ORTHO05D006506 2.2e-122 443.4 463 59.6
Mapoly0070s0045 Marchantia polymorpha HOM05D005230 ORTHO05D006506 4.6e-120 435.6 467 55.9
Zm00001eb051600 Zea mays HOM05D005230 ORTHO05D006506 7.4e-118 428.3 365 64.1
TAR628G1140 Trochodendron aralioides HOM05D005230 ORTHO05D006506 4.8e-109 399.1 301 69.8
Dinv24610 Davidia involucrata HOM05D005230 ORTHO05D006506 1.4e-108 397.5 334 66.2
SMO117G0151 Selaginella moellendorffii HOM05D005230 ORTHO05D006506 9.4e-105 384.8 463 51.2
C09p56810 Brassica napus HOM05D005230 ORTHO05D006506 3.0e-79 300.1 292 67.8
Mapoly0050s0011 Marchantia polymorpha HOM05D005230 ORTHO05D006506 8.9e-71 271.9 397 42.3
CBR_g54067 Chara braunii HOM05D005230 ORTHO05D006506 6.0e-67 259.2 462 43.1
Mapoly0050s0012 Marchantia polymorpha HOM05D005230 ORTHO05D006506 1.6e-59 234.6 242 55.0
BolC9t58535H Brassica oleracea HOM05D005230 ORTHO05D006506 5.1e-58 229.6 189 69.3
Cre03.g207825 Chlamydomonas reinhardtii HOM05D005230 ORTHO05D006506 5.6e-57 226.1 507 41.2
CSS0018745 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 9.5e-57 225.3 150 79.3
Duzib150G0729 Durio zibethinus HOM05D005230 ORTHO05D006506 1.1e-49 201.8 163 67.5
MCO03G336 Micromonas commoda HOM05D005230 ORTHO05D006506 6.2e-48 196.1 399 32.3
Gohir.A05G264150 Gossypium hirsutum HOM05D005230 ORTHO05D006506 2.4e-44 184.1 123 74.0
PRCOL_00006600 Prasinoderma coloniale HOM05D005230 ORTHO05D006506 5.6e-41 172.9 504 34.9
FvH4_4g06340 Fragaria vesca HOM05D005230 ORTHO05D006506 4.4e-38 163.3 121 71.9
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 2.4e-36 157.5 135 62.2
Mapoly0070s0046 Marchantia polymorpha HOM05D005230 ORTHO05D006506 6.0e-35 152.9 209 48.3
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 1.1e-23 115.5 220 37.7
BcaC04g24210 Brassica carinata HOM05D005230 ORTHO05D006506 1.0e-21 109.0 68 83.8
Psat2g003760 Pisum sativum HOM05D005230 ORTHO05D006506 6.5e-21 106.3 94 61.7
Nn7g36957 Nelumbo nucifera HOM05D005230 ORTHO05D006506 3.5e-19 100.5 55 94.5
Sed0001059 Sechium edule HOM05D005230 ORTHO05D006506 3.5e-19 100.5 100 85.0
VMungo1309G2461 Vigna mungo HOM05D002467 ORTHO05D013374 1.3e-18 98.6 121 51.2
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 3.2e-12 77.4 59 69.5
Dinv24611 Davidia involucrata HOM05D005230 ORTHO05D006506 2.1e-11 74.7 50 86.0
Psat0s3158g0040 Pisum sativum HOM05D005230 ORTHO05D320643 1.3e-10 72.0 60 60.0
TAR623G0477 Trochodendron aralioides HOM05D005230 ORTHO05D006506 1.8e-10 71.6 97 47.4
Psat2g028360 Pisum sativum HOM05D005230 ORTHO05D006506 8.7e-10 69.3 107 44.9
Psat4g142680 Pisum sativum HOM05D000493 ORTHO05D001638 7.4e-09 66.2 61 55.7
Psat0s472g0120 Pisum sativum HOM05D005230 ORTHO05D023087 9.7e-09 65.9 62 56.5
Psat4g142760 Pisum sativum HOM05D000493 ORTHO05D004446 1.3e-08 65.5 64 51.6
MELO3C033360.2 Cucumis melo HOM05D005230 ORTHO05D013374 1.8e-07 61.6 63 57.1
Psat5g186320 Pisum sativum HOM05D000280 ORTHO05D004446 6.9e-07 59.7 104 42.3
PRCOL_00001177 Prasinoderma coloniale HOM05D004145 ORTHO05D004879 3.4e-06 57.4 250 23.6


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