Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009798 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D022117 2.3e-49 198.4 87 100.0
CSS0004187 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D022117 8.0e-42 173.3 87 89.7
CSS0032793 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D022117 8.0e-42 173.3 87 89.7
MD05G1192400 Malus domestica HOM05D004940 ORTHO05D007805 1.9e-35 152.1 86 79.1
Actinidia37536 Actinidia chinensis HOM05D004940 ORTHO05D007805 7.3e-35 150.2 105 65.7
Dinv16378 Davidia involucrata HOM05D004940 ORTHO05D007805 7.3e-35 150.2 87 77.0
vmacro02697 Vaccinium macrocarpon HOM05D004940 ORTHO05D007805 7.3e-35 150.2 87 78.2
Cc01_g18010 Coffea canephora HOM05D004940 ORTHO05D007805 9.5e-35 149.8 87 78.2
Rhsim13G0038600 Rhododendron simsii HOM05D004940 ORTHO05D007805 9.5e-35 149.8 87 78.2
TWI12G0664 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 9.5e-35 149.8 87 78.2
Aqoxy5G00176 Aquilegia oxysepala HOM05D004940 ORTHO05D007805 2.8e-34 148.3 87 77.0
PSO764G0099 Papaver somniferum HOM05D004940 ORTHO05D007805 4.7e-34 147.5 87 77.0
PSO832G3423 Papaver somniferum HOM05D004940 ORTHO05D007805 4.7e-34 147.5 87 77.0
Migut.D00459 Erythranthe guttata HOM05D004940 ORTHO05D007805 6.2e-34 147.1 87 75.9
TWI75G1829 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 6.2e-34 147.1 87 77.0
TAR362G0048 Trochodendron aralioides HOM05D004940 ORTHO05D007805 6.2e-34 147.1 87 75.9
GSVIVG01028386001 Vitis vinifera HOM05D004940 ORTHO05D007805 6.2e-34 147.1 87 75.9
SalBow4G0784 Salvia bowleyana HOM05D004940 ORTHO05D007805 1.8e-33 145.6 87 74.7
Sc24g0003690 Simmondsia chinensis HOM05D004940 ORTHO05D007805 1.8e-33 145.6 87 75.9
Lj1g0003710 Lotus japonicus HOM05D004940 ORTHO05D007805 2.3e-33 145.2 87 77.0
MBI07_g18994_MAGBIO Magnolia biondii HOM05D004940 ORTHO05D007805 2.3e-33 145.2 87 75.9
RcHm_v2.0_Chr6g0287291 Rosa chinensis HOM05D004940 ORTHO05D007805 5.2e-33 144.1 87 74.7
HPP92_012808 Vanilla planifolia HOM05D004940 ORTHO05D007805 6.8e-33 143.7 87 74.7
AUR62025474 Chenopodium quinoa HOM05D004940 ORTHO05D007805 8.9e-33 143.3 87 75.9
Medtr7g098010 Medicago truncatula HOM05D004940 ORTHO05D007805 8.9e-33 143.3 87 75.9
Oeu028892.3 Olea europaea HOM05D004940 ORTHO05D007805 8.9e-33 143.3 87 73.6
QL09p040550 Quercus lobata HOM05D004940 ORTHO05D007805 8.9e-33 143.3 86 74.4
CAN.G1270.3 Capsicum annuum HOM05D004940 ORTHO05D007805 1.2e-32 142.9 87 73.6
MD10G1178900 Malus domestica HOM05D004940 ORTHO05D007805 1.2e-32 142.9 86 73.3
MSTRG.18341 Avicennia marina HOM05D004940 ORTHO05D007805 1.5e-32 142.5 87 74.7
Gohir.D08G056200 Gossypium hirsutum HOM05D004940 ORTHO05D007805 1.5e-32 142.5 87 74.7
Gorai.004G057300 Gossypium raimondii HOM05D004940 ORTHO05D007805 1.5e-32 142.5 87 74.7
Lsat_1_v5_gn_8_92240 Lactuca sativa HOM05D004940 ORTHO05D007805 1.5e-32 142.5 87 73.6
EL10Ac7g17647 Beta vulgaris HOM05D004940 ORTHO05D007805 2.0e-32 142.1 87 74.7
Nn1g02898 Nelumbo nucifera HOM05D004940 ORTHO05D007805 2.0e-32 142.1 87 75.9
AUR62008763 Chenopodium quinoa HOM05D004940 ORTHO05D007805 2.6e-32 141.7 87 75.9
FvH4_2g20890 Fragaria vesca HOM05D004940 ORTHO05D007805 2.6e-32 141.7 87 73.6
FAN27G1261 Fragaria x ananassa HOM05D004940 ORTHO05D007805 2.6e-32 141.7 87 73.6
Lalb_Chr01g0019571 Lupinus albus HOM05D004940 ORTHO05D007805 2.6e-32 141.7 87 75.9
arahy.Tifrunner.gnm1.ann1.N1VHSE Arachis hypogaea HOM05D004940 ORTHO05D007805 3.4e-32 141.4 86 73.3
arahy.Tifrunner.gnm1.ann1.YK26R7 Arachis hypogaea HOM05D004940 ORTHO05D007805 3.4e-32 141.4 86 73.3
HanXRQChr04g0111301 Helianthus annuus HOM05D004940 ORTHO05D007805 3.4e-32 141.4 87 73.6
Solyc09g072710.4 Solanum lycopersicum HOM05D004940 ORTHO05D007805 3.4e-32 141.4 87 71.3
CiPaw.03G268400 Carya illinoinensis HOM05D004940 ORTHO05D007805 4.4e-32 141.0 87 71.3
Cpa.g.sc165.41 Carica papaya HOM05D004940 ORTHO05D007805 5.8e-32 140.6 87 71.3
Glyma.19G166800 Glycine max HOM05D004940 ORTHO05D007805 5.8e-32 140.6 87 73.6
Sabra14G0144700 Salix brachista HOM05D004940 ORTHO05D007805 7.5e-32 140.2 87 72.4
Potri.014G195500 Populus trichocarpa HOM05D004940 ORTHO05D007805 9.8e-32 139.8 87 72.4
ECA236G4817 Erigeron canadensis HOM05D004940 ORTHO05D007805 1.3e-31 139.4 87 73.6
Sopen09g028520 Solanum pennellii HOM05D004940 ORTHO05D007805 1.3e-31 139.4 87 70.1
TPR.G9192 Trifolium pratense HOM05D004940 ORTHO05D007805 1.3e-31 139.4 87 72.4
Duzib138G0347 Durio zibethinus HOM05D004940 ORTHO05D007805 2.2e-31 138.7 87 72.4
Psat3g055720 Pisum sativum HOM05D004940 ORTHO05D007805 2.2e-31 138.7 87 72.4
Thecc.01G253300 Theobroma cacao HOM05D004940 ORTHO05D007805 2.2e-31 138.7 87 72.4
Atru.chr5.1783 Acer truncatum HOM05D004940 ORTHO05D007805 2.9e-31 138.3 87 72.4
Atru.chr5.1786 Acer truncatum HOM05D004940 ORTHO05D007805 2.9e-31 138.3 87 72.4
Eucgr.A01366 Eucalyptus grandis HOM05D004940 ORTHO05D007805 2.9e-31 138.3 87 69.0
Migut.N02221 Erythranthe guttata HOM05D004940 ORTHO05D007805 8.3e-31 136.7 87 72.4
Phvul.001G163200 Phaseolus vulgaris HOM05D004940 ORTHO05D007805 8.3e-31 136.7 87 70.1
PGR031G0691 Punica granatum HOM05D004940 ORTHO05D007805 8.3e-31 136.7 87 70.1
VMungo1383G2176 Vigna mungo HOM05D004940 ORTHO05D007805 8.3e-31 136.7 87 70.1
CANSAT01G2138 Cannabis sativa HOM05D004940 ORTHO05D007805 1.4e-30 136.0 87 71.3
DCAR_000927 Daucus carota HOM05D004940 ORTHO05D007805 2.4e-30 135.2 87 70.1
THA.LOC104826048 Tarenaya hassleriana HOM05D004940 ORTHO05D007805 9.2e-30 133.3 85 71.8
Sed0008536 Sechium edule HOM05D004940 ORTHO05D007805 2.7e-29 131.7 87 67.8
SEGI_08888 Sequoiadendron giganteum HOM05D004940 ORTHO05D007805 2.7e-29 131.7 87 69.0
AT1G04010 Arabidopsis thaliana HOM05D004940 ORTHO05D007805 3.5e-29 131.3 87 70.1
BcaC05g24475 Brassica carinata HOM05D004940 ORTHO05D007805 3.5e-29 131.3 87 70.1
BcaC07g42217 Brassica carinata HOM05D004940 ORTHO05D007805 3.5e-29 131.3 87 70.1
A09p68080 Brassica napus HOM05D004940 ORTHO05D007805 3.5e-29 131.3 87 70.1
C08p52520 Brassica napus HOM05D004940 ORTHO05D007805 3.5e-29 131.3 87 70.1
BolC5t29011H Brassica oleracea HOM05D004940 ORTHO05D007805 3.5e-29 131.3 87 70.1
BolC8t52779H Brassica oleracea HOM05D004940 ORTHO05D007805 3.5e-29 131.3 87 70.1
BraA09t42143Z Brassica rapa HOM05D004940 ORTHO05D007805 3.5e-29 131.3 87 70.1
BraA10t42520Z Brassica rapa HOM05D004940 ORTHO05D007805 3.5e-29 131.3 87 70.1
Carub.0001s0317 Capsella rubella HOM05D004940 ORTHO05D007805 3.5e-29 131.3 87 70.1
CsaV3_3G028180 Cucumis sativus L. HOM05D004940 ORTHO05D007805 3.5e-29 131.3 87 67.8
Thhalv10007051m.g Eutrema salsugineum HOM05D004940 ORTHO05D007805 3.5e-29 131.3 87 70.1
AL1G13620 Arabidopsis lyrata HOM05D004940 ORTHO05D007805 4.6e-29 131.0 87 70.1
CARHR003360 Cardamine hirsuta HOM05D004940 ORTHO05D007805 4.6e-29 131.0 87 70.1
FAN20G1599 Fragaria x ananassa HOM05D004940 ORTHO05D007805 4.6e-29 131.0 87 70.1
Sp1g02850 Schrenkiella parvula HOM05D004940 ORTHO05D007805 4.6e-29 131.0 87 70.1
Zm00001eb258680 Zea mays HOM05D004940 ORTHO05D007805 4.6e-29 131.0 87 72.4
Aa31LG1G20810 Aethionema arabicum HOM05D004940 ORTHO05D007805 6.0e-29 130.6 87 70.1
A10p02520 Brassica napus HOM05D004940 ORTHO05D007805 3.0e-28 128.3 106 60.4
C05p02330 Brassica napus HOM05D004940 ORTHO05D007805 3.0e-28 128.3 107 59.8
Ciclev10019263m.g Citrus clementina HOM05D004940 ORTHO05D007805 5.1e-28 127.5 87 65.5
Haze_24676 Corylus avellana HOM05D004940 ORTHO05D007805 1.1e-25 119.8 80 68.8
Hund05470 Selenicereus undatus HOM05D004940 ORTHO05D007805 6.4e-23 110.5 91 57.1
CSS0021031 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D007805 1.4e-22 109.4 79 68.4
SMO137G0189 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 3.2e-22 108.2 87 56.3
Ca_08723_v3 Cicer arietinum L. HOM05D004940 ORTHO05D007805 1.6e-21 105.9 52 82.7
Manes.12G035200 Manihot esculenta HOM05D004940 ORTHO05D007805 3.5e-21 104.8 51 82.4
Glyma.03G165500 Glycine max HOM05D004940 ORTHO05D007805 6.0e-21 104.0 51 82.4
Mapoly0023s0070 Marchantia polymorpha HOM05D004940 ORTHO05D007805 1.3e-20 102.8 80 58.8
Nitab4.5_0002389g0100 Nicotiana tabacum HOM05D004940 ORTHO05D007805 2.3e-20 102.1 56 78.6
Nitab4.5_0003295g0190 Nicotiana tabacum HOM05D004940 ORTHO05D007805 2.3e-20 102.1 56 78.6
CSS0050068 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D022117 6.6e-20 100.5 87 60.9
FAN15G2608 Fragaria x ananassa HOM05D004940 ORTHO05D007805 6.6e-20 100.5 67 68.7
AagrBONN_evm.TU.Sc2ySwM_344.1925 Anthoceros agrestis HOM05D004940 ORTHO05D007805 5.6e-19 97.4 88 53.4
FAN24G3024 Fragaria x ananassa HOM05D004940 ORTHO05D007805 7.3e-19 97.1 67 67.2
Duzib133G0552 Durio zibethinus HOM05D004940 ORTHO05D007805 3.6e-18 94.7 51 74.5
Pp3c16_20320 Physcomitrium patens HOM05D004940 ORTHO05D007805 8.1e-18 93.6 88 51.1
SMO137G0113 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 3.1e-17 91.7 87 50.6
ATR0736G200 Amborella trichopoda HOM05D004940 ORTHO05D007805 5.2e-17 90.9 42 90.5
Phvul.008G143913 Phaseolus vulgaris HOM05D004940 ORTHO05D022117 2.2e-15 85.5 87 52.9
ClCG07G001250 Citrullus lanatus HOM05D004940 ORTHO05D007805 1.3e-10 69.7 87 44.8
Peaxi162Scf00415g00415 Petunia axillaris HOM05D004940 ORTHO05D022117 5.4e-06 54.3 26 84.6


User provided reference genes

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