Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009778 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 1.3e-43 179.5 98 100.0
Actinidia35177 Actinidia chinensis HOM05D004022 ORTHO05D004090 2.6e-12 75.5 93 52.7
Rhsim06G0184700 Rhododendron simsii HOM05D004022 ORTHO05D004090 4.4e-12 74.7 95 60.0
ECA236G3547 Erigeron canadensis HOM05D004022 ORTHO05D004090 2.2e-11 72.4 98 49.0
CSS0036966 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 6.3e-11 70.9 107 47.7
Haze_05605 Corylus avellana HOM05D004022 ORTHO05D004090 8.3e-11 70.5 102 46.1
HanXRQChr15g0492271 Helianthus annuus HOM05D004022 ORTHO05D004090 2.4e-10 68.9 102 45.1
A07p43670 Brassica napus HOM05D004022 ORTHO05D004090 9.1e-10 67.0 95 43.2
Thecc.06G149800 Theobroma cacao HOM05D004022 ORTHO05D004090 1.2e-09 66.6 113 44.2
Gohir.D10G042200 Gossypium hirsutum HOM05D004022 ORTHO05D004090 2.0e-09 65.9 121 40.5
Gorai.011G044800 Gossypium raimondii HOM05D004022 ORTHO05D004090 2.0e-09 65.9 121 40.5
C05p15530 Brassica napus HOM05D004022 ORTHO05D004090 3.5e-09 65.1 99 44.4
COL.COLO4_31065 Corchorus olitorius HOM05D004022 ORTHO05D004090 3.5e-09 65.1 111 45.9
Duzib192G0777 Durio zibethinus HOM05D004022 ORTHO05D004090 3.5e-09 65.1 113 45.1
Thhalv10009187m.g Eutrema salsugineum HOM05D004022 ORTHO05D004090 4.5e-09 64.7 99 43.4
Atru.chr10.1218 Acer truncatum HOM05D004022 ORTHO05D004090 5.9e-09 64.3 105 41.9
BcaB07g34047 Brassica carinata HOM05D004022 ORTHO05D004090 5.9e-09 64.3 99 44.4
CARHR017720 Cardamine hirsuta HOM05D004022 ORTHO05D004090 5.9e-09 64.3 100 44.0
CiPaw.09G122900 Carya illinoinensis HOM05D004022 ORTHO05D004090 5.9e-09 64.3 115 41.7
BcaC05g25663 Brassica carinata HOM05D004022 ORTHO05D004090 7.7e-09 63.9 99 43.4
BcaC08g47415 Brassica carinata HOM05D004022 ORTHO05D004090 7.7e-09 63.9 95 42.1
QL05p057789 Quercus lobata HOM05D004022 ORTHO05D004090 7.7e-09 63.9 112 42.0
AL2G38780 Arabidopsis lyrata HOM05D004022 ORTHO05D004090 1.0e-08 63.5 101 43.6
THA.LOC104813977 Tarenaya hassleriana HOM05D004022 ORTHO05D004090 1.0e-08 63.5 94 44.7
Duzib235G0028 Durio zibethinus HOM05D004022 ORTHO05D004090 1.3e-08 63.2 112 42.0
AL1G29370 Arabidopsis lyrata HOM05D004022 ORTHO05D004090 1.7e-08 62.8 98 43.9
BraA07t31879Z Brassica rapa HOM05D004022 ORTHO05D004090 1.7e-08 62.8 95 42.1
BcaB02g07170 Brassica carinata HOM05D004022 ORTHO05D004090 2.2e-08 62.4 94 43.6
BcaC08g45417 Brassica carinata HOM05D004022 ORTHO05D004090 2.2e-08 62.4 95 44.2
A06p13050 Brassica napus HOM05D004022 ORTHO05D004090 2.2e-08 62.4 96 44.8
C06p30490 Brassica napus HOM05D004022 ORTHO05D004090 2.2e-08 62.4 95 44.2
BolC6t38212H Brassica oleracea HOM05D004022 ORTHO05D004090 2.2e-08 62.4 95 44.2
TAR627G0510 Trochodendron aralioides HOM05D004022 ORTHO05D004090 2.2e-08 62.4 103 46.6
BraA06t24464Z Brassica rapa HOM05D004022 ORTHO05D004090 2.9e-08 62.0 100 41.0
C02p35580 Brassica napus HOM05D004022 ORTHO05D004090 3.8e-08 61.6 95 41.1
BolC5t30263H Brassica oleracea HOM05D004022 ORTHO05D004090 3.8e-08 61.6 99 42.4
BolC6t40255H Brassica oleracea HOM05D004022 ORTHO05D004090 3.8e-08 61.6 95 41.1
Carub.0001s1689 Capsella rubella HOM05D004022 ORTHO05D004090 3.8e-08 61.6 101 42.6
Gohir.A10G041400 Gossypium hirsutum HOM05D004022 ORTHO05D004090 3.8e-08 61.6 121 38.8
Sp1g15290 Schrenkiella parvula HOM05D004022 ORTHO05D004090 3.8e-08 61.6 97 43.3
BcaC03g15811 Brassica carinata HOM05D004022 ORTHO05D004090 5.0e-08 61.2 95 41.1
A02p22170 Brassica napus HOM05D004022 ORTHO05D004090 5.0e-08 61.2 95 41.1
BolC2t09573H Brassica oleracea HOM05D004022 ORTHO05D004090 5.0e-08 61.2 95 41.1
BraA02t07221Z Brassica rapa HOM05D004022 ORTHO05D004090 5.0e-08 61.2 95 41.1
CSS0046120 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 5.0e-08 61.2 95 44.2
Migut.M00648 Erythranthe guttata HOM05D004022 ORTHO05D004090 5.0e-08 61.2 103 47.6
DCAR_021057 Daucus carota HOM05D004022 ORTHO05D004090 6.5e-08 60.8 96 44.8
BcaC07g38833 Brassica carinata HOM05D004022 ORTHO05D004090 8.5e-08 60.5 95 44.2
C08p17730 Brassica napus HOM05D004022 ORTHO05D004090 8.5e-08 60.5 95 44.2
A08p31100 Brassica napus HOM05D004022 ORTHO05D004090 1.1e-07 60.1 95 43.2
BraA08t35036Z Brassica rapa HOM05D004022 ORTHO05D004090 1.1e-07 60.1 95 43.2
QL04p070411 Quercus lobata HOM05D004022 ORTHO05D004090 1.1e-07 60.1 100 44.0
Lsat_1_v5_gn_7_101361 Lactuca sativa HOM05D004022 ORTHO05D004090 1.5e-07 59.7 95 45.3
Lsat_1_v5_gn_7_101401 Lactuca sativa HOM05D004022 ORTHO05D004090 1.5e-07 59.7 103 44.7
Peaxi162Scf00111g00083 Petunia axillaris HOM05D004022 ORTHO05D004090 1.5e-07 59.7 100 48.0
QL04p070436 Quercus lobata HOM05D004022 ORTHO05D004090 1.5e-07 59.7 100 44.0
Sc03g0007740 Simmondsia chinensis HOM05D004022 ORTHO05D004090 1.9e-07 59.3 87 44.8
Thecc.07G146700 Theobroma cacao HOM05D004022 ORTHO05D004090 1.9e-07 59.3 102 42.2
AT1G17147 Arabidopsis thaliana HOM05D004022 ORTHO05D004090 2.5e-07 58.9 98 41.8
BcaB05g25138 Brassica carinata HOM05D004022 ORTHO05D004090 2.5e-07 58.9 99 44.4
Gorai.009G154700 Gossypium raimondii HOM05D004022 ORTHO05D004090 2.5e-07 58.9 116 44.0
A07p27550 Brassica napus HOM05D004022 ORTHO05D004090 3.2e-07 58.5 99 40.4
BraA07t30397Z Brassica rapa HOM05D004022 ORTHO05D004090 3.2e-07 58.5 99 40.4
Dinv32245 Davidia involucrata HOM05D004022 ORTHO05D004090 3.2e-07 58.5 87 48.3
Duzib160G0057 Durio zibethinus HOM05D004022 ORTHO05D004090 3.2e-07 58.5 107 43.9
Migut.M00652 Erythranthe guttata HOM05D004022 ORTHO05D004090 3.2e-07 58.5 98 41.8
Gohir.D05G150601 Gossypium hirsutum HOM05D004022 ORTHO05D004090 3.2e-07 58.5 116 44.0
RhsimUnG0204300 Rhododendron simsii HOM05D004022 ORTHO05D004090 3.2e-07 58.5 71 52.1
Gohir.D01G029300 Gossypium hirsutum HOM05D004022 ORTHO05D004090 4.2e-07 58.2 105 40.0
Gorai.002G038600 Gossypium raimondii HOM05D004022 ORTHO05D004090 4.2e-07 58.2 105 40.0
BcaB03g13015 Brassica carinata HOM05D004022 ORTHO05D004090 5.5e-07 57.8 92 42.4
C06p52350 Brassica napus HOM05D004022 ORTHO05D004090 5.5e-07 57.8 78 44.9
CiPaw.10G091400 Carya illinoinensis HOM05D004022 ORTHO05D004090 7.2e-07 57.4 114 38.6
QL04p070376 Quercus lobata HOM05D004022 ORTHO05D004090 7.2e-07 57.4 100 43.0
Duzib213G0178 Durio zibethinus HOM05D004022 ORTHO05D004090 9.4e-07 57.0 95 44.2
Thhalv10019550m.g Eutrema salsugineum HOM05D004022 ORTHO05D004090 9.4e-07 57.0 97 42.3
Gohir.A05G148100 Gossypium hirsutum HOM05D004022 ORTHO05D004090 9.4e-07 57.0 104 44.2
BcaB03g16016 Brassica carinata HOM05D004022 ORTHO05D004090 1.2e-06 56.6 96 38.5
CARHR071930 Cardamine hirsuta HOM05D004022 ORTHO05D004090 1.2e-06 56.6 38 68.4
COL.COLO4_17416 Corchorus olitorius HOM05D004022 ORTHO05D004090 1.2e-06 56.6 42 64.3
Psat1g075360 Pisum sativum HOM05D004022 ORTHO05D004090 1.2e-06 56.6 54 57.4
Carub.0002s2531 Capsella rubella HOM05D004022 ORTHO05D004090 1.6e-06 56.2 59 52.5
THA.LOC104812289 Tarenaya hassleriana HOM05D004022 ORTHO05D004090 1.6e-06 56.2 55 58.2
Lalb_Chr25g0285381 Lupinus albus HOM05D004022 ORTHO05D004090 2.1e-06 55.8 37 73.0
EL10Ac9g22063 Beta vulgaris HOM05D004022 ORTHO05D004090 2.7e-06 55.5 37 70.3
Glyma.15G249800 Glycine max HOM05D004022 ORTHO05D004090 2.7e-06 55.5 85 45.9
SalBow8G5432 Salvia bowleyana HOM05D004022 ORTHO05D004090 2.7e-06 55.5 89 43.8
Cpa.g.sc2579.1 Carica papaya HOM05D004022 ORTHO05D004090 3.6e-06 55.1 98 44.9
Eucgr.F01407 Eucalyptus grandis HOM05D004022 ORTHO05D004090 3.6e-06 55.1 39 66.7
HanXRQChr11g0330361 Helianthus annuus HOM05D004022 ORTHO05D004090 3.6e-06 55.1 109 39.4
Nitab4.5_0000505g0120 Nicotiana tabacum HOM05D004022 ORTHO05D004090 3.6e-06 55.1 95 42.1
unitig_899.g15299 Utricularia gibba HOM05D004022 ORTHO05D004090 4.7e-06 54.7 85 44.7
Aa31LG4G2550 Aethionema arabicum HOM05D004022 ORTHO05D004090 6.1e-06 54.3 61 49.2
CAN.G1003.7 Capsicum annuum HOM05D004022 ORTHO05D004090 6.1e-06 54.3 92 46.7
SalBow8G0217 Salvia bowleyana HOM05D004022 ORTHO05D004090 6.1e-06 54.3 89 42.7
arahy.Tifrunner.gnm1.ann1.I20P02 Arachis hypogaea HOM05D004022 ORTHO05D004090 8.0e-06 53.9 37 70.3
Haze_08493 Corylus avellana HOM05D004022 ORTHO05D004090 8.0e-06 53.9 40 65.0
Duzib268G0389 Durio zibethinus HOM05D004022 ORTHO05D004090 8.0e-06 53.9 100 38.0
Eucgr.F01408 Eucalyptus grandis HOM05D004022 ORTHO05D004090 8.0e-06 53.9 102 39.2
Solyc07g056600.1 Solanum lycopersicum HOM05D004022 ORTHO05D004090 8.0e-06 53.9 102 45.1


User provided reference genes

Program Settings